RNA–Protein interactions for RNA: ENST00000361917.5

COL11A2-202, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-202ENST00000361917 LAMTOR1Q6IAA8 161 aa12.73□□□□□ -0.37
COL11A2-202ENST00000361917 FADS6Q8N9I5 356 aa12.73□□□□□ -0.37
COL11A2-202ENST00000361917 SP9P0CG40 484 aa12.73□□□□□ -0.37
COL11A2-202ENST00000361917 PNKDQ8N490 385 aa12.73□□□□□ -0.37
COL11A2-202ENST00000361917 QTRT1Q9BXR0 403 aaKnown RBP12.73□□□□□ -0.37
COL11A2-202ENST00000361917 GCM2O75603 506 aaPredicted RBP12.73□□□□□ -0.37
COL11A2-202ENST00000361917 LGALS3P17931 250 aaKnown RBP12.73□□□□□ -0.37
COL11A2-202ENST00000361917 ZNF660Q6AZW8 331 aaPredicted RBP12.73□□□□□ -0.37
COL11A2-202ENST00000361917 HIST1H4GQ99525 98 aa12.73□□□□□ -0.37
COL11A2-202ENST00000361917 DCTN5Q9BTE1 182 aa12.73□□□□□ -0.37
COL11A2-202ENST00000361917 WNT5BQ9H1J7 359 aa12.73□□□□□ -0.37
COL11A2-202ENST00000361917 IGHV3-35A0A0C4DH35 117 aa12.73□□□□□ -0.37
COL11A2-202ENST00000361917 SMAD7O15105 426 aaKnown RBP12.73□□□□□ -0.37
COL11A2-202ENST00000361917 CRYBB3P26998 211 aa12.73□□□□□ -0.37
COL11A2-202ENST00000361917 NUP37Q8NFH4 326 aa12.73□□□□□ -0.37
COL11A2-202ENST00000361917 F11RQ9Y624 299 aaKnown RBP12.73□□□□□ -0.37
COL11A2-202ENST00000361917 PCM1Q15154 2024 aa12.73□□□□□ -0.37
COL11A2-202ENST00000361917 TRBV5-7A0A0A0MS05 114 aa12.73□□□□□ -0.37
COL11A2-202ENST00000361917 G6PC2Q9NQR9 355 aa12.73□□□□□ -0.37
COL11A2-202ENST00000361917 FAM90A10PA6NDY2 464 aa12.72□□□□□ -0.37
COL11A2-202ENST00000361917 FAM90A18PA6NE21 464 aa12.72□□□□□ -0.37
COL11A2-202ENST00000361917 FAM90A16PA6NEW6 464 aa12.72□□□□□ -0.37
COL11A2-202ENST00000361917 FAM90A20PA6NIJ5 464 aa12.72□□□□□ -0.37
COL11A2-202ENST00000361917 FAM90A8PA6NJQ4 464 aa12.72□□□□□ -0.37
COL11A2-202ENST00000361917 FAM90A7PA6NKC0 464 aa12.72□□□□□ -0.37
COL11A2-202ENST00000361917 FAM90A22PA8MWA6 464 aa12.72□□□□□ -0.37
COL11A2-202ENST00000361917 FAM90A12PA8MX19 464 aa12.72□□□□□ -0.37
COL11A2-202ENST00000361917 FAM90A5PA8MXJ8 464 aa12.72□□□□□ -0.37
COL11A2-202ENST00000361917 FAM90A23PA8MXZ1 464 aa12.72□□□□□ -0.37
COL11A2-202ENST00000361917 FAM90A15PP0C7V4 464 aa12.72□□□□□ -0.37
COL11A2-202ENST00000361917 FAM90A13PP0C7W8 464 aa12.72□□□□□ -0.37
COL11A2-202ENST00000361917 FAM90A14PP0C7W9 464 aa12.72□□□□□ -0.37
COL11A2-202ENST00000361917 FAM90A24PP0C7X0 464 aa12.72□□□□□ -0.37
COL11A2-202ENST00000361917 LOXL4Q96JB6 756 aa12.72□□□□□ -0.37
COL11A2-202ENST00000361917 GPR82Q96P67 336 aa12.72□□□□□ -0.37
COL11A2-202ENST00000361917 SMDT1Q9H4I9 107 aa12.72□□□□□ -0.37
COL11A2-202ENST00000361917 FOXJ2Q9P0K8 574 aa12.72□□□□□ -0.37
COL11A2-202ENST00000361917 SHANK3Q9BYB0 1731 aa12.72□□□□□ -0.37
COL11A2-202ENST00000361917 SIPA1L3O60292 1781 aaPredicted RBP12.72□□□□□ -0.37
COL11A2-202ENST00000361917 IGHV1-69-2A0A0G2JMI3 117 aa12.72□□□□□ -0.37
COL11A2-202ENST00000361917 LOC101059948A0A1B0GTJ6 334 aa12.72□□□□□ -0.37
COL11A2-202ENST00000361917 PRR19A6NJB7 356 aa12.72□□□□□ -0.37
COL11A2-202ENST00000361917 HSPE1P61604 102 aaKnown RBP12.72□□□□□ -0.37
COL11A2-202ENST00000361917 GDF9O60383 454 aa12.72□□□□□ -0.37
COL11A2-202ENST00000361917 ZNF56Q15929 161 aa12.72□□□□□ -0.37
COL11A2-202ENST00000361917 OR1P1Q8NH06 330 aa12.72□□□□□ -0.37
COL11A2-202ENST00000361917 LINC01560Q8TB33 94 aa12.72□□□□□ -0.37
COL11A2-202ENST00000361917 COX6CP09669 75 aa12.72□□□□□ -0.37
COL11A2-202ENST00000361917 COL5A1-AS1Q5SY13 56 aa12.72□□□□□ -0.37
COL11A2-202ENST00000361917 C5orf66Q9H5L9 145 aa12.72□□□□□ -0.37
COL11A2-202ENST00000361917 C17orf51A8MQB3 221 aa12.71□□□□□ -0.37
COL11A2-202ENST00000361917 NDUFA2O43678 99 aa12.71□□□□□ -0.37
COL11A2-202ENST00000361917 LEPROTL1O95214 131 aa12.71□□□□□ -0.37
COL11A2-202ENST00000361917 MT-ND6P03923 174 aa12.71□□□□□ -0.37
COL11A2-202ENST00000361917 CRYBA2P53672 197 aa12.71□□□□□ -0.37
COL11A2-202ENST00000361917 RSPO4Q2I0M5 234 aaPredicted RBP12.71□□□□□ -0.37
COL11A2-202ENST00000361917 JPT1Q9UK76 154 aa12.71□□□□□ -0.37
COL11A2-202ENST00000361917 MYO16Q9Y6X6 1858 aa12.71□□□□□ -0.37
COL11A2-202ENST00000361917 NUP214P35658 2090 aaPredicted RBP12.71□□□□□ -0.37
COL11A2-202ENST00000361917 C7orf71A4D174 169 aa12.71□□□□□ -0.37
COL11A2-202ENST00000361917 IFNL4K9M1U5 179 aa12.71□□□□□ -0.37
COL11A2-202ENST00000361917 TRAV30A0A087WSZ9 112 aa12.71□□□□□ -0.37
COL11A2-202ENST00000361917 GCGP01275 180 aa12.71□□□□□ -0.37
COL11A2-202ENST00000361917 C8orf88P0DMB2 117 aa12.71□□□□□ -0.37
COL11A2-202ENST00000361917 PCOLCEQ15113 449 aa12.71□□□□□ -0.37
COL11A2-202ENST00000361917 C1orf100Q5SVJ3 147 aa12.71□□□□□ -0.37
COL11A2-202ENST00000361917 MBNL2Q5VZF2 373 aaKnown RBP12.71□□□□□ -0.37
COL11A2-202ENST00000361917 ZNF385CQ66K41 422 aaPredicted RBP12.71□□□□□ -0.37
COL11A2-202ENST00000361917 CENPVQ7Z7K6 275 aaPredicted RBP12.71□□□□□ -0.37
COL11A2-202ENST00000361917 RELQ04864 619 aaPredicted RBP12.71□□□□□ -0.38
COL11A2-202ENST00000361917 NINQ8N4C6 2090 aa12.71□□□□□ -0.38
COL11A2-202ENST00000361917 IGHV3-66A0A0C4DH42 116 aa12.71□□□□□ -0.38
COL11A2-202ENST00000361917 CYB5R2Q6BCY4 276 aa12.71□□□□□ -0.38
COL11A2-202ENST00000361917 ZCCHC14Q8WYQ9 949 aaKnown RBP12.71□□□□□ -0.38
COL11A2-202ENST00000361917 Q96M66 194 aa12.71□□□□□ -0.38
COL11A2-202ENST00000361917 WFIKKN1Q96NZ8 548 aa12.71□□□□□ -0.38
COL11A2-202ENST00000361917 PARLQ9H300 379 aa12.71□□□□□ -0.38
COL11A2-202ENST00000361917 IGKV1D-42A0A075B6H8 117 aa12.7□□□□□ -0.38
COL11A2-202ENST00000361917 MOSP00540 346 aa12.7□□□□□ -0.38
COL11A2-202ENST00000361917 NMBP08949 121 aa12.7□□□□□ -0.38
COL11A2-202ENST00000361917 KIAA1644Q3SXP7 199 aa12.7□□□□□ -0.38
COL11A2-202ENST00000361917 PUSL1Q8N0Z8 303 aaKnown RBP12.7□□□□□ -0.38
COL11A2-202ENST00000361917 CLEC7AQ9BXN2 247 aa12.7□□□□□ -0.38
COL11A2-202ENST00000361917 COL25A1Q9BXS0 654 aaPredicted RBP12.7□□□□□ -0.38
COL11A2-202ENST00000361917 TMEM74BQ9NUR3 256 aa12.7□□□□□ -0.38
COL11A2-202ENST00000361917 ABLIM2Q6H8Q1 611 aa12.7□□□□□ -0.38
COL11A2-202ENST00000361917 EEF1AKMT3Q96AZ1 226 aa12.7□□□□□ -0.38
COL11A2-202ENST00000361917 A0A1W2PQM1 296 aa12.7□□□□□ -0.38
COL11A2-202ENST00000361917 GAGE10A6NGK3 116 aa12.7□□□□□ -0.38
COL11A2-202ENST00000361917 PIN1P1O15428 100 aa12.7□□□□□ -0.38
COL11A2-202ENST00000361917 STARD6P59095 220 aa12.7□□□□□ -0.38
COL11A2-202ENST00000361917 FHL5Q5TD97 284 aa12.7□□□□□ -0.38
COL11A2-202ENST00000361917 OR9G1Q8NH87 305 aa12.7□□□□□ -0.38
COL11A2-202ENST00000361917 GALNT14Q96FL9 552 aa12.7□□□□□ -0.38
COL11A2-202ENST00000361917 IGHV3OR16-13A0A075B7E8 117 aa12.7□□□□□ -0.38
COL11A2-202ENST00000361917 IGHV3-74A0A0B4J1X5 117 aa12.7□□□□□ -0.38
COL11A2-202ENST00000361917 PPP1R17O96001 155 aa12.7□□□□□ -0.38
COL11A2-202ENST00000361917 CFDP00746 253 aaPredicted RBP12.7□□□□□ -0.38
COL11A2-202ENST00000361917 HLA-DQA1P01909 254 aa12.7□□□□□ -0.38
COL11A2-202ENST00000361917 PRSS2P07478 247 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms