RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 PNRC2Q9NPJ4 139 aaKnown RBP11.83□□□□□ -0.52
COL6A1-201ENST00000361866 MARCH11A6NNE9 402 aa11.82□□□□□ -0.52
COL6A1-201ENST00000361866 M0R296 226 aa11.82□□□□□ -0.52
COL6A1-201ENST00000361866 M0R2Z0 102 aa11.82□□□□□ -0.52
COL6A1-201ENST00000361866 ATP5G3P48201 142 aa11.82□□□□□ -0.52
COL6A1-201ENST00000361866 MFAP2P55001 183 aa11.82□□□□□ -0.52
COL6A1-201ENST00000361866 HES1Q14469 280 aa11.82□□□□□ -0.52
COL6A1-201ENST00000361866 LBHQ53QV2 105 aaPredicted RBP11.82□□□□□ -0.52
COL6A1-201ENST00000361866 TEPPQ6URK8 271 aa11.82□□□□□ -0.52
COL6A1-201ENST00000361866 HIST3H2BBQ8N257 126 aa11.82□□□□□ -0.52
COL6A1-201ENST00000361866 USF3Q68DE3 2245 aa11.82□□□□□ -0.52
COL6A1-201ENST00000361866 A0A087WWC5 75 aa11.82□□□□□ -0.52
COL6A1-201ENST00000361866 ODAMA1E959 279 aa11.82□□□□□ -0.52
COL6A1-201ENST00000361866 PMS2P1A4D2B8 440 aa11.82□□□□□ -0.52
COL6A1-201ENST00000361866 CXorf1O96002 111 aa11.82□□□□□ -0.52
COL6A1-201ENST00000361866 PLAUP00749 431 aa11.82□□□□□ -0.52
COL6A1-201ENST00000361866 FOXG1P55316 489 aaPredicted RBP11.82□□□□□ -0.52
COL6A1-201ENST00000361866 SPCS3P61009 180 aa11.82□□□□□ -0.52
COL6A1-201ENST00000361866 RPL23P62829 140 aaKnown RBP11.82□□□□□ -0.52
COL6A1-201ENST00000361866 SCGB2A2Q13296 93 aa11.82□□□□□ -0.52
COL6A1-201ENST00000361866 TCF23Q7RTU1 214 aa11.82□□□□□ -0.52
COL6A1-201ENST00000361866 OR4S2Q8NH73 311 aa11.82□□□□□ -0.52
COL6A1-201ENST00000361866 C1orf147Q96MC9 270 aaPredicted RBP11.82□□□□□ -0.52
COL6A1-201ENST00000361866 TMEM56Q96MV1 263 aa11.82□□□□□ -0.52
COL6A1-201ENST00000361866 PRDM14Q9GZV8 571 aa11.82□□□□□ -0.52
COL6A1-201ENST00000361866 CHRNA10Q9GZZ6 450 aa11.82□□□□□ -0.52
COL6A1-201ENST00000361866 TMEM56-RWDD3S4R434 201 aa11.82□□□□□ -0.52
COL6A1-201ENST00000361866 M0QZK8 103 aa11.82□□□□□ -0.52
COL6A1-201ENST00000361866 GGCTO75223 188 aaKnown RBP11.82□□□□□ -0.52
COL6A1-201ENST00000361866 IGHV3-48P01763 117 aa11.82□□□□□ -0.52
COL6A1-201ENST00000361866 CD33P20138 364 aa11.82□□□□□ -0.52
COL6A1-201ENST00000361866 GPX4P36969 197 aaPredicted RBP11.82□□□□□ -0.52
COL6A1-201ENST00000361866 SOX8P57073 446 aa11.82□□□□□ -0.52
COL6A1-201ENST00000361866 MOGAT3Q86VF5 341 aa11.82□□□□□ -0.52
COL6A1-201ENST00000361866 WFDC8Q8IUA0 241 aa11.82□□□□□ -0.52
COL6A1-201ENST00000361866 C11orf42Q8N5U0 333 aa11.82□□□□□ -0.52
COL6A1-201ENST00000361866 MRPL18Q9H0U6 180 aaKnown RBP11.82□□□□□ -0.52
COL6A1-201ENST00000361866 NKX6-3A6NJ46 265 aa11.81□□□□□ -0.52
COL6A1-201ENST00000361866 LRRC75BQ2VPJ9 315 aa11.81□□□□□ -0.52
COL6A1-201ENST00000361866 DMRTA1Q5VZB9 504 aa11.81□□□□□ -0.52
COL6A1-201ENST00000361866 LIME1Q9H400 295 aa11.81□□□□□ -0.52
COL6A1-201ENST00000361866 NCOA6Q14686 2063 aaPredicted RBP11.81□□□□□ -0.52
COL6A1-201ENST00000361866 FAM90A10PA6NDY2 464 aa11.81□□□□□ -0.52
COL6A1-201ENST00000361866 FAM90A18PA6NE21 464 aa11.81□□□□□ -0.52
COL6A1-201ENST00000361866 FAM90A16PA6NEW6 464 aa11.81□□□□□ -0.52
COL6A1-201ENST00000361866 FAM90A20PA6NIJ5 464 aa11.81□□□□□ -0.52
COL6A1-201ENST00000361866 FAM90A8PA6NJQ4 464 aa11.81□□□□□ -0.52
COL6A1-201ENST00000361866 FAM90A7PA6NKC0 464 aa11.81□□□□□ -0.52
COL6A1-201ENST00000361866 FAM90A22PA8MWA6 464 aa11.81□□□□□ -0.52
COL6A1-201ENST00000361866 FAM90A12PA8MX19 464 aa11.81□□□□□ -0.52
COL6A1-201ENST00000361866 FAM90A5PA8MXJ8 464 aa11.81□□□□□ -0.52
COL6A1-201ENST00000361866 FAM90A23PA8MXZ1 464 aa11.81□□□□□ -0.52
COL6A1-201ENST00000361866 TFF1P04155 84 aa11.81□□□□□ -0.52
COL6A1-201ENST00000361866 FAM90A15PP0C7V4 464 aa11.81□□□□□ -0.52
COL6A1-201ENST00000361866 FAM90A13PP0C7W8 464 aa11.81□□□□□ -0.52
COL6A1-201ENST00000361866 FAM90A14PP0C7W9 464 aa11.81□□□□□ -0.52
COL6A1-201ENST00000361866 FAM90A24PP0C7X0 464 aa11.81□□□□□ -0.52
COL6A1-201ENST00000361866 REG1BP48304 166 aa11.81□□□□□ -0.52
COL6A1-201ENST00000361866 MISP3Q96FF7 219 aa11.81□□□□□ -0.52
COL6A1-201ENST00000361866 CXXC4Q9H2H0 198 aa11.81□□□□□ -0.52
COL6A1-201ENST00000361866 ALPK3Q96L96 1907 aa11.81□□□□□ -0.52
COL6A1-201ENST00000361866 CLDN14O95500 239 aa11.81□□□□□ -0.52
COL6A1-201ENST00000361866 TCTAP57738 103 aa11.81□□□□□ -0.52
COL6A1-201ENST00000361866 HERPUD1Q15011 391 aa11.81□□□□□ -0.52
COL6A1-201ENST00000361866 PSMG3Q9BT73 122 aaPredicted RBP11.81□□□□□ -0.52
COL6A1-201ENST00000361866 COL6A6A6NMZ7 2263 aa11.81□□□□□ -0.52
COL6A1-201ENST00000361866 PLXNA2O75051 1894 aa11.81□□□□□ -0.52
COL6A1-201ENST00000361866 TMEM250H0YL14 139 aa11.81□□□□□ -0.52
COL6A1-201ENST00000361866 CHRNB4P30926 498 aa11.81□□□□□ -0.52
COL6A1-201ENST00000361866 HINT1P49773 126 aaPredicted RBP11.81□□□□□ -0.52
COL6A1-201ENST00000361866 ZNF137PP52743 207 aa11.81□□□□□ -0.52
COL6A1-201ENST00000361866 BPIFB3P59826 476 aa11.81□□□□□ -0.52
COL6A1-201ENST00000361866 AARDQ4LEZ3 155 aa11.81□□□□□ -0.52
COL6A1-201ENST00000361866 IGHV3-21A0A0B4J1V1 117 aa11.8□□□□□ -0.52
COL6A1-201ENST00000361866 LRRC30A6NM36 301 aa11.8□□□□□ -0.52
COL6A1-201ENST00000361866 CYC1P08574 325 aa11.8□□□□□ -0.52
COL6A1-201ENST00000361866 DCAF10Q5QP82 559 aa11.8□□□□□ -0.52
COL6A1-201ENST00000361866 PQLC2Q6ZP29 291 aa11.8□□□□□ -0.52
COL6A1-201ENST00000361866 SPOCK3Q9BQ16 436 aa11.8□□□□□ -0.52
COL6A1-201ENST00000361866 DCTN5Q9BTE1 182 aa11.8□□□□□ -0.52
COL6A1-201ENST00000361866 NPVFQ9HCQ7 196 aa11.8□□□□□ -0.52
COL6A1-201ENST00000361866 BET1LQ9NYM9 111 aa11.8□□□□□ -0.52
COL6A1-201ENST00000361866 A0A0C4DFX4 3053 aa11.8□□□□□ -0.52
COL6A1-201ENST00000361866 C17orf98A8MV24 154 aa11.8□□□□□ -0.52
COL6A1-201ENST00000361866 FGF5P12034 268 aa11.8□□□□□ -0.52
COL6A1-201ENST00000361866 SRP14P37108 136 aaKnown RBP11.8□□□□□ -0.52
COL6A1-201ENST00000361866 ZIC4Q8N9L1 334 aa11.8□□□□□ -0.52
COL6A1-201ENST00000361866 PLSCR2Q9NRY7 297 aa11.8□□□□□ -0.52
COL6A1-201ENST00000361866 NAPSAO96009 420 aa11.8□□□□□ -0.52
COL6A1-201ENST00000361866 GZMHP20718 246 aa11.8□□□□□ -0.52
COL6A1-201ENST00000361866 CSRP1P21291 193 aaKnown RBP11.8□□□□□ -0.52
COL6A1-201ENST00000361866 CRYBB3P26998 211 aa11.8□□□□□ -0.52
COL6A1-201ENST00000361866 BRS3P32247 399 aa11.8□□□□□ -0.52
COL6A1-201ENST00000361866 DEFB109BQ30KR1 87 aa11.8□□□□□ -0.52
COL6A1-201ENST00000361866 SAP25Q8TEE9 199 aa11.8□□□□□ -0.52
COL6A1-201ENST00000361866 LSM10Q969L4 123 aaKnown RBP11.8□□□□□ -0.52
COL6A1-201ENST00000361866 WBP1Q96G27 269 aa11.8□□□□□ -0.52
COL6A1-201ENST00000361866 C1QTNF9P0C862 333 aa11.79□□□□□ -0.52
COL6A1-201ENST00000361866 GCSAMLQ5JQS6 135 aa11.79□□□□□ -0.52
COL6A1-201ENST00000361866 WDR73Q6P4I2 378 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms