RNA–Protein interactions for RNA: ENST00000361371.9

LTN1-201, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LTN1, Length 7,685 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-201ENST00000361371 GLS2Q9UI32 602 aa2.32□□□□□ -2.04
LTN1-201ENST00000361371 LINC00312Q9Y6C7 94 aa2.32□□□□□ -2.04
LTN1-201ENST00000361371 hADV38S2A0JD32 116 aa2.32□□□□□ -2.04
LTN1-201ENST00000361371 LRRC30A6NM36 301 aa2.32□□□□□ -2.04
LTN1-201ENST00000361371 ZNF729A6NN14 1252 aaPredicted RBP2.32□□□□□ -2.04
LTN1-201ENST00000361371 PRB4P10163 310 aaPredicted RBP2.32□□□□□ -2.04
LTN1-201ENST00000361371 S100A11P31949 105 aa2.32□□□□□ -2.04
LTN1-201ENST00000361371 SSBP2P81877 361 aaPredicted RBP2.32□□□□□ -2.04
LTN1-201ENST00000361371 HIST2H2BDQ6DRA6 164 aa2.32□□□□□ -2.04
LTN1-201ENST00000361371 FIP1L1Q6UN15 594 aaKnown RBP2.32□□□□□ -2.04
LTN1-201ENST00000361371 SLC25A48Q6ZT89 311 aaKnown RBP2.32□□□□□ -2.04
LTN1-201ENST00000361371 PIP4P2Q8N4L2 257 aa2.32□□□□□ -2.04
LTN1-201ENST00000361371 FAM103A1Q9BTL3 118 aaKnown RBP2.32□□□□□ -2.04
LTN1-201ENST00000361371 ZNF471Q9BX82 626 aaPredicted RBP2.32□□□□□ -2.04
LTN1-201ENST00000361371 VSIRQ9H7M9 311 aa2.32□□□□□ -2.04
LTN1-201ENST00000361371 MRPL36Q9P0J6 103 aaKnown RBP2.32□□□□□ -2.04
LTN1-201ENST00000361371 CREBBPQ92793 2442 aa2.32□□□□□ -2.04
LTN1-201ENST00000361371 A0A1B0GV50 99 aa2.31□□□□□ -2.04
LTN1-201ENST00000361371 CYSRT1A8MQ03 144 aa2.31□□□□□ -2.04
LTN1-201ENST00000361371 VSTM5A8MXK1 200 aa2.31□□□□□ -2.04
LTN1-201ENST00000361371 RRHO14718 337 aa2.31□□□□□ -2.04
LTN1-201ENST00000361371 YPEL1O60688 119 aa2.31□□□□□ -2.04
LTN1-201ENST00000361371 NKX2-1P43699 371 aaPredicted RBP2.31□□□□□ -2.04
LTN1-201ENST00000361371 GPR12P47775 334 aa2.31□□□□□ -2.04
LTN1-201ENST00000361371 ARHGDIBP52566 201 aa2.31□□□□□ -2.04
LTN1-201ENST00000361371 DEFA5Q01523 94 aa2.31□□□□□ -2.04
LTN1-201ENST00000361371 SRSF7Q16629 238 aaKnown RBP eCLIP2.31□□□□□ -2.04
LTN1-201ENST00000361371 CMTM1Q8IZ96 169 aa2.31□□□□□ -2.04
LTN1-201ENST00000361371 KCNRGQ8N5I3 272 aa2.31□□□□□ -2.04
LTN1-201ENST00000361371 OR10W1Q8NGF6 305 aa2.31□□□□□ -2.04
LTN1-201ENST00000361371 YPEL2Q96QA6 119 aa2.31□□□□□ -2.04
LTN1-201ENST00000361371 DIRC2Q96SL1 478 aa2.31□□□□□ -2.04
LTN1-201ENST00000361371 OR6C3Q9NZP0 311 aa2.31□□□□□ -2.04
LTN1-201ENST00000361371 PAIP2BQ9ULR5 123 aaKnown RBP2.31□□□□□ -2.04
LTN1-201ENST00000361371 J3QR06 171 aa2.31□□□□□ -2.04
LTN1-201ENST00000361371 NMBP08949 121 aa2.31□□□□□ -2.04
LTN1-201ENST00000361371 HTR2BP41595 481 aa2.31□□□□□ -2.04
LTN1-201ENST00000361371 PPOXP50336 477 aa2.31□□□□□ -2.04
LTN1-201ENST00000361371 ATP5J2P56134 94 aa2.31□□□□□ -2.04
LTN1-201ENST00000361371 HTD2P86397 168 aa2.31□□□□□ -2.04
LTN1-201ENST00000361371 RELBQ01201 579 aa2.31□□□□□ -2.04
LTN1-201ENST00000361371 TEX261Q6UWH6 196 aa2.31□□□□□ -2.04
LTN1-201ENST00000361371 NEIL1Q96FI4 390 aaPredicted RBP2.31□□□□□ -2.04
LTN1-201ENST00000361371 SH3BGRL3Q9H299 93 aa2.31□□□□□ -2.04
LTN1-201ENST00000361371 PFDN2Q9UHV9 154 aa2.31□□□□□ -2.04
LTN1-201ENST00000361371 GAB2Q9UQC2 676 aa2.31□□□□□ -2.04
LTN1-201ENST00000361371 U3KQ87 197 aa2.31□□□□□ -2.04
LTN1-201ENST00000361371 NKX6-3A6NJ46 265 aa2.31□□□□□ -2.04
LTN1-201ENST00000361371 LINC01548A6NM66 108 aa2.31□□□□□ -2.04
LTN1-201ENST00000361371 H0Y980 276 aa2.31□□□□□ -2.04
LTN1-201ENST00000361371 ST8SIA3O43173 380 aa2.31□□□□□ -2.04
LTN1-201ENST00000361371 RPL12P30050 165 aaKnown RBP2.31□□□□□ -2.04
LTN1-201ENST00000361371 PAX5Q02548 391 aa2.31□□□□□ -2.04
LTN1-201ENST00000361371 FAM120AOSQ5T036 256 aa2.31□□□□□ -2.04
LTN1-201ENST00000361371 TCF24Q7RTU0 167 aa2.31□□□□□ -2.04
LTN1-201ENST00000361371 ZNF645Q8N7E2 425 aa2.31□□□□□ -2.04
LTN1-201ENST00000361371 RHOFQ9HBH0 211 aa2.31□□□□□ -2.04
LTN1-201ENST00000361371 IGHV2-26A0A0B4J1V2 119 aa2.31□□□□□ -2.04
LTN1-201ENST00000361371 MARCH11A6NNE9 402 aa2.31□□□□□ -2.04
LTN1-201ENST00000361371 SSSCA1O60232 199 aa2.31□□□□□ -2.04
LTN1-201ENST00000361371 IFNA21P01568 189 aa2.31□□□□□ -2.04
LTN1-201ENST00000361371 CCL20P78556 96 aa2.31□□□□□ -2.04
LTN1-201ENST00000361371 SRSF3P84103 164 aaKnown RBP2.31□□□□□ -2.04
LTN1-201ENST00000361371 EWSR1Q01844 656 aaKnown RBP eCLIP2.31□□□□□ -2.04
LTN1-201ENST00000361371 TMEM267Q0VDI3 215 aaPredicted RBP2.31□□□□□ -2.04
LTN1-201ENST00000361371 LRRC10Q5BKY1 277 aa2.31□□□□□ -2.04
LTN1-201ENST00000361371 WFDC11Q8NEX6 87 aa2.31□□□□□ -2.04
LTN1-201ENST00000361371 OR5D13Q8NGL4 314 aa2.31□□□□□ -2.04
LTN1-201ENST00000361371 RAB1CQ92928 201 aa2.31□□□□□ -2.04
LTN1-201ENST00000361371 R3HDM4Q96D70 268 aa2.31□□□□□ -2.04
LTN1-201ENST00000361371 AJUBAQ96IF1 538 aa2.31□□□□□ -2.04
LTN1-201ENST00000361371 OR4C12Q96R67 309 aa2.31□□□□□ -2.04
LTN1-201ENST00000361371 RAB1BQ9H0U4 201 aa2.31□□□□□ -2.04
LTN1-201ENST00000361371 LINC00574Q9H8X3 128 aa2.31□□□□□ -2.04
LTN1-201ENST00000361371 SLC35D1Q9NTN3 355 aa2.31□□□□□ -2.04
LTN1-201ENST00000361371 LINC00527Q9UJ94 153 aa2.31□□□□□ -2.04
LTN1-201ENST00000361371 CGB1A6NKQ9 187 aa2.31□□□□□ -2.04
LTN1-201ENST00000361371 SOX15O60248 233 aa2.31□□□□□ -2.04
LTN1-201ENST00000361371 SNRPCP09234 159 aaKnown RBP2.31□□□□□ -2.04
LTN1-201ENST00000361371 METTL15P1P0C7V9 234 aa2.31□□□□□ -2.04
LTN1-201ENST00000361371 GCSAMLQ5JQS6 135 aa2.31□□□□□ -2.04
LTN1-201ENST00000361371 KLF17Q5JT82 389 aaPredicted RBP2.31□□□□□ -2.04
LTN1-201ENST00000361371 SPANXN5Q5MJ07 72 aa2.31□□□□□ -2.04
LTN1-201ENST00000361371 LY6G5BQ8NDX9 201 aa2.31□□□□□ -2.04
LTN1-201ENST00000361371 C10orf105Q8TEF2 133 aa2.31□□□□□ -2.04
LTN1-201ENST00000361371 ST8SIA2Q92186 375 aa2.31□□□□□ -2.04
LTN1-201ENST00000361371 TMEM133Q9H2Q1 129 aa2.31□□□□□ -2.04
LTN1-201ENST00000361371 ONECUT1Q9UBC0 465 aa2.31□□□□□ -2.04
LTN1-201ENST00000361371 IGHV3-21A0A0B4J1V1 117 aa2.31□□□□□ -2.04
LTN1-201ENST00000361371 MDFIC2A0A1B0GVS7 189 aa2.31□□□□□ -2.04
LTN1-201ENST00000361371 TIMM23O14925 209 aa2.31□□□□□ -2.04
LTN1-201ENST00000361371 SYNGR2O43760 224 aa2.31□□□□□ -2.04
LTN1-201ENST00000361371 IL6RP08887 468 aaPredicted RBP2.31□□□□□ -2.04
LTN1-201ENST00000361371 F2RL1P55085 397 aa2.31□□□□□ -2.04
LTN1-201ENST00000361371 GNB2P62879 340 aa2.31□□□□□ -2.04
LTN1-201ENST00000361371 MEF2CQ06413 473 aaPredicted RBP2.31□□□□□ -2.04
LTN1-201ENST00000361371 LPCAT3Q6P1A2 487 aa2.31□□□□□ -2.04
LTN1-201ENST00000361371 RNASE11Q8TAA1 199 aaKnown RBP2.31□□□□□ -2.04
LTN1-201ENST00000361371 AKR1E2Q96JD6 320 aa2.31□□□□□ -2.04
LTN1-201ENST00000361371 SEBOXQ9HB31 216 aaPredicted RBP2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms