RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 CGB1A6NKQ9 187 aa11.53□□□□□ -0.56
CCDC144A-203ENST00000360495 ATXN7O15265 892 aaPredicted RBP11.53□□□□□ -0.56
CCDC144A-203ENST00000360495 RPL8P62917 257 aaKnown RBP11.53□□□□□ -0.56
CCDC144A-203ENST00000360495 RNFT1Q5M7Z0 435 aa11.53□□□□□ -0.56
CCDC144A-203ENST00000360495 ZNF324BQ6AW86 544 aaPredicted RBP11.53□□□□□ -0.56
CCDC144A-203ENST00000360495 NABP2Q9BQ15 211 aa11.53□□□□□ -0.56
CCDC144A-203ENST00000360495 MRPS16Q9Y3D3 137 aaKnown RBP11.53□□□□□ -0.56
CCDC144A-203ENST00000360495 AKAP11Q9UKA4 1901 aa11.53□□□□□ -0.56
CCDC144A-203ENST00000360495 LAMB1P07942 1786 aa11.53□□□□□ -0.56
CCDC144A-203ENST00000360495 H3BTX0 84 aa11.53□□□□□ -0.56
CCDC144A-203ENST00000360495 TNFSF14O43557 240 aa11.53□□□□□ -0.56
CCDC144A-203ENST00000360495 TGFAP01135 160 aa11.53□□□□□ -0.56
CCDC144A-203ENST00000360495 APOHP02749 345 aaPredicted RBP11.53□□□□□ -0.56
CCDC144A-203ENST00000360495 CCL3P10147 92 aa11.53□□□□□ -0.56
CCDC144A-203ENST00000360495 ERGP11308 486 aa11.53□□□□□ -0.56
CCDC144A-203ENST00000360495 FCGR2BP31994 310 aaPredicted RBP11.53□□□□□ -0.56
CCDC144A-203ENST00000360495 HEXA-AS1Q9H8Q6 139 aa11.53□□□□□ -0.56
CCDC144A-203ENST00000360495 NRN1Q9NPD7 142 aa11.53□□□□□ -0.56
CCDC144A-203ENST00000360495 IGLV1-36A0A0B4J1U3 117 aa11.52□□□□□ -0.56
CCDC144A-203ENST00000360495 PSG4Q00888 419 aa11.52□□□□□ -0.56
CCDC144A-203ENST00000360495 SPEM1Q8N4L4 309 aa11.52□□□□□ -0.56
CCDC144A-203ENST00000360495 STPG3Q8N7X2 389 aa11.52□□□□□ -0.56
CCDC144A-203ENST00000360495 OR51G1Q8NGK1 321 aa11.52□□□□□ -0.56
CCDC144A-203ENST00000360495 TMEM170AQ8WVE7 144 aa11.52□□□□□ -0.56
CCDC144A-203ENST00000360495 NUDT11Q96G61 164 aa11.52□□□□□ -0.56
CCDC144A-203ENST00000360495 C16orf92Q96LL3 132 aa11.52□□□□□ -0.56
CCDC144A-203ENST00000360495 DNAJC13O75165 2243 aa11.52□□□□□ -0.56
CCDC144A-203ENST00000360495 MARCH11A6NNE9 402 aa11.52□□□□□ -0.56
CCDC144A-203ENST00000360495 RRHO14718 337 aa11.52□□□□□ -0.56
CCDC144A-203ENST00000360495 MGST3O14880 152 aa11.52□□□□□ -0.56
CCDC144A-203ENST00000360495 CXCL10P02778 98 aa11.52□□□□□ -0.56
CCDC144A-203ENST00000360495 TFPI2P48307 235 aa11.52□□□□□ -0.56
CCDC144A-203ENST00000360495 MDP1Q86V88 176 aa11.52□□□□□ -0.56
CCDC144A-203ENST00000360495 TEX29Q8N6K0 151 aa11.52□□□□□ -0.56
CCDC144A-203ENST00000360495 RAB1BQ9H0U4 201 aa11.52□□□□□ -0.56
CCDC144A-203ENST00000360495 TRBV20OR9-2A0A075B6H5 130 aa11.52□□□□□ -0.57
CCDC144A-203ENST00000360495 PPIAL4DF5H284 164 aa11.52□□□□□ -0.57
CCDC144A-203ENST00000360495 HSPE1P61604 102 aaKnown RBP11.52□□□□□ -0.57
CCDC144A-203ENST00000360495 C19orf24Q9BVV8 132 aa11.52□□□□□ -0.57
CCDC144A-203ENST00000360495 TRAV8-2A0A0B4J237 113 aa11.52□□□□□ -0.57
CCDC144A-203ENST00000360495 HIST1H2BKO60814 126 aa11.52□□□□□ -0.57
CCDC144A-203ENST00000360495 HIST1H2BJP06899 126 aa11.52□□□□□ -0.57
CCDC144A-203ENST00000360495 HIST1H2BOP23527 126 aa11.52□□□□□ -0.57
CCDC144A-203ENST00000360495 HIST1H2BBP33778 126 aa11.52□□□□□ -0.57
CCDC144A-203ENST00000360495 MAGEA5P43359 124 aa11.52□□□□□ -0.57
CCDC144A-203ENST00000360495 UCP3P55916 312 aa11.52□□□□□ -0.57
CCDC144A-203ENST00000360495 HIST1H2BDP58876 126 aa11.52□□□□□ -0.57
CCDC144A-203ENST00000360495 HIST1H2BCP62807 126 aa11.52□□□□□ -0.57
CCDC144A-203ENST00000360495 SRSF3P84103 164 aaKnown RBP11.52□□□□□ -0.57
CCDC144A-203ENST00000360495 KCNMB1Q16558 191 aa11.52□□□□□ -0.57
CCDC144A-203ENST00000360495 HIST2H2BEQ16778 126 aa11.52□□□□□ -0.57
CCDC144A-203ENST00000360495 TMEM95Q3KNT9 176 aa11.52□□□□□ -0.57
CCDC144A-203ENST00000360495 SNAI3Q3KNW1 292 aa11.52□□□□□ -0.57
CCDC144A-203ENST00000360495 MAJINQ3KP22 176 aa11.52□□□□□ -0.57
CCDC144A-203ENST00000360495 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.52□□□□□ -0.57
CCDC144A-203ENST00000360495 HIST1H2BHQ93079 126 aa11.52□□□□□ -0.57
CCDC144A-203ENST00000360495 HIST1H2BNQ99877 126 aa11.52□□□□□ -0.57
CCDC144A-203ENST00000360495 HIST1H2BMQ99879 126 aa11.52□□□□□ -0.57
CCDC144A-203ENST00000360495 TRAV14DV4A0A0A6YYC5 116 aa11.52□□□□□ -0.57
CCDC144A-203ENST00000360495 CLDND2Q8NHS1 167 aa11.52□□□□□ -0.57
CCDC144A-203ENST00000360495 SFXN3Q9BWM7 321 aa11.52□□□□□ -0.57
CCDC144A-203ENST00000360495 MRPL32Q9BYC8 188 aaKnown RBP11.52□□□□□ -0.57
CCDC144A-203ENST00000360495 SLC25A10Q9UBX3 287 aaPredicted RBP11.52□□□□□ -0.57
CCDC144A-203ENST00000360495 C17orf51A8MQB3 221 aa11.51□□□□□ -0.57
CCDC144A-203ENST00000360495 Q96M66 194 aa11.51□□□□□ -0.57
CCDC144A-203ENST00000360495 GPR82Q96P67 336 aa11.51□□□□□ -0.57
CCDC144A-203ENST00000360495 KNTC1P50748 2209 aa11.51□□□□□ -0.57
CCDC144A-203ENST00000360495 GLRX5Q86SX6 157 aa11.51□□□□□ -0.57
CCDC144A-203ENST00000360495 TMEM106BQ9NUM4 274 aa11.51□□□□□ -0.57
CCDC144A-203ENST00000360495 LOC390937A0A1W2PQ73 354 aa11.51□□□□□ -0.57
CCDC144A-203ENST00000360495 GOLT1AQ6ZVE7 132 aa11.51□□□□□ -0.57
CCDC144A-203ENST00000360495 ABHD12Q8N2K0 398 aa11.51□□□□□ -0.57
CCDC144A-203ENST00000360495 PRELID3AQ96N28 172 aa11.51□□□□□ -0.57
CCDC144A-203ENST00000360495 SPAG8Q99932 426 aaPredicted RBP11.51□□□□□ -0.57
CCDC144A-203ENST00000360495 ELOVL5Q9NYP7 299 aa11.51□□□□□ -0.57
CCDC144A-203ENST00000360495 ZNF257Q9Y2Q1 563 aa11.51□□□□□ -0.57
CCDC144A-203ENST00000360495 TMEM14DPA8MWL7 114 aa11.51□□□□□ -0.57
CCDC144A-203ENST00000360495 UBE2L6O14933 153 aa11.51□□□□□ -0.57
CCDC144A-203ENST00000360495 APOMO95445 188 aa11.51□□□□□ -0.57
CCDC144A-203ENST00000360495 PPP1R17O96001 155 aa11.51□□□□□ -0.57
CCDC144A-203ENST00000360495 LIFP15018 202 aa11.51□□□□□ -0.57
CCDC144A-203ENST00000360495 TMEM170BQ5T4T1 132 aa11.51□□□□□ -0.57
CCDC144A-203ENST00000360495 A0A1W2PRS3 328 aa11.5□□□□□ -0.57
CCDC144A-203ENST00000360495 PSG9Q00887 426 aa11.5□□□□□ -0.57
CCDC144A-203ENST00000360495 INO80CQ6PI98 192 aaPredicted RBP11.5□□□□□ -0.57
CCDC144A-203ENST00000360495 TCF23Q7RTU1 214 aa11.5□□□□□ -0.57
CCDC144A-203ENST00000360495 OR5A1Q8NGJ0 315 aa11.5□□□□□ -0.57
CCDC144A-203ENST00000360495 TMEM56-RWDD3S4R434 201 aa11.5□□□□□ -0.57
CCDC144A-203ENST00000360495 TRAV9-1A0A075B6T8 112 aa11.5□□□□□ -0.57
CCDC144A-203ENST00000360495 IGKV3D-15A0A087WSY6 115 aa11.5□□□□□ -0.57
CCDC144A-203ENST00000360495 FAM90A27PA6NNH2 459 aa11.5□□□□□ -0.57
CCDC144A-203ENST00000360495 IGKV3-15P01624 115 aa11.5□□□□□ -0.57
CCDC144A-203ENST00000360495 GCSAMQ8N6F7 178 aa11.5□□□□□ -0.57
CCDC144A-203ENST00000360495 KCNK17Q96T54 332 aa11.5□□□□□ -0.57
CCDC144A-203ENST00000360495 NPCDR1Q9BY65 106 aa11.5□□□□□ -0.57
CCDC144A-203ENST00000360495 TCF19Q9Y242 345 aa11.5□□□□□ -0.57
CCDC144A-203ENST00000360495 LINC01565O15544 149 aa11.5□□□□□ -0.57
CCDC144A-203ENST00000360495 AICDAQ9GZX7 198 aa11.5□□□□□ -0.57
CCDC144A-203ENST00000360495 DLL3Q9NYJ7 618 aa11.5□□□□□ -0.57
CCDC144A-203ENST00000360495 SCO2A0A1W2PP80 73 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms