RNA–Protein interactions for RNA: ENST00000360171.10

CBWD3-201, Transcript of COBW domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBWD3, Length 2,165 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-201ENST00000360171 ABHD5Q8WTS1 349 aa16.96■□□□□ 0.31
CBWD3-201ENST00000360171 TAF15Q92804 592 aaKnown RBP eCLIP16.96■□□□□ 0.31
CBWD3-201ENST00000360171 OR4C12Q96R67 309 aa16.96■□□□□ 0.31
CBWD3-201ENST00000360171 MAP1LC3BQ9GZQ8 125 aa16.96■□□□□ 0.31
CBWD3-201ENST00000360171 TUBG2Q9NRH3 451 aa16.96■□□□□ 0.31
CBWD3-201ENST00000360171 PPP1R3CQ9UQK1 317 aa16.96■□□□□ 0.31
CBWD3-201ENST00000360171 ZBTB34Q8NCN2 500 aa16.95■□□□□ 0.3
CBWD3-201ENST00000360171 FRZBQ92765 325 aa16.95■□□□□ 0.3
CBWD3-201ENST00000360171 MLNRO43193 412 aa16.95■□□□□ 0.3
CBWD3-201ENST00000360171 OR2H2O95918 312 aa16.95■□□□□ 0.3
CBWD3-201ENST00000360171 SOD3P08294 240 aa16.95■□□□□ 0.3
CBWD3-201ENST00000360171 HIST1H1BP16401 226 aaKnown RBP16.95■□□□□ 0.3
CBWD3-201ENST00000360171 CD40P25942 277 aa16.95■□□□□ 0.3
CBWD3-201ENST00000360171 OR10D4PQ8NGN7 298 aa16.95■□□□□ 0.3
CBWD3-201ENST00000360171 NAT8Q9UHE5 227 aa16.95■□□□□ 0.3
CBWD3-201ENST00000360171 TRAPPC2LQ9UL33 140 aa16.95■□□□□ 0.3
CBWD3-201ENST00000360171 RBM7Q9Y580 266 aaKnown RBP16.95■□□□□ 0.3
CBWD3-201ENST00000360171 GCH1P30793 250 aa16.94■□□□□ 0.3
CBWD3-201ENST00000360171 SLC38A11Q08AI6 406 aa16.94■□□□□ 0.3
CBWD3-201ENST00000360171 CHD3Q12873 2000 aaKnown RBP16.94■□□□□ 0.3
CBWD3-201ENST00000360171 ZNF146Q15072 292 aa16.94■□□□□ 0.3
CBWD3-201ENST00000360171 Q6ZR03 302 aa16.94■□□□□ 0.3
CBWD3-201ENST00000360171 CYP2G1PQ6ZSU1 146 aa16.94■□□□□ 0.3
CBWD3-201ENST00000360171 DRAM1Q8N682 238 aa16.94■□□□□ 0.3
CBWD3-201ENST00000360171 ADGRG4Q8IZF6 3080 aa16.94■□□□□ 0.3
CBWD3-201ENST00000360171 FAM90A27PA6NNH2 459 aa16.94■□□□□ 0.3
CBWD3-201ENST00000360171 CEBPZOSA8MTT3 80 aa16.94■□□□□ 0.3
CBWD3-201ENST00000360171 TIMM8AO60220 97 aaPredicted RBP16.94■□□□□ 0.3
CBWD3-201ENST00000360171 FGF8P55075 233 aaPredicted RBP16.94■□□□□ 0.3
CBWD3-201ENST00000360171 ATP6V1FQ16864 119 aa16.94■□□□□ 0.3
CBWD3-201ENST00000360171 LRP11Q86VZ4 500 aa16.94■□□□□ 0.3
CBWD3-201ENST00000360171 C1orf174Q8IYL3 243 aa16.94■□□□□ 0.3
CBWD3-201ENST00000360171 GPR61Q9BZJ8 451 aa16.94■□□□□ 0.3
CBWD3-201ENST00000360171 HSPB7Q9UBY9 170 aa16.94■□□□□ 0.3
CBWD3-201ENST00000360171 KCNS2Q9ULS6 477 aa16.94■□□□□ 0.3
CBWD3-201ENST00000360171 PLCE1Q9P212 2302 aa16.93■□□□□ 0.3
CBWD3-201ENST00000360171 IGSF10Q6WRI0 2623 aa16.93■□□□□ 0.3
CBWD3-201ENST00000360171 DIDO1Q9BTC0 2240 aaKnown RBP16.93■□□□□ 0.3
CBWD3-201ENST00000360171 CHRNB4P30926 498 aa16.93■□□□□ 0.3
CBWD3-201ENST00000360171 CDSNQ15517 529 aa16.93■□□□□ 0.3
CBWD3-201ENST00000360171 SPANXN5Q5MJ07 72 aa16.93■□□□□ 0.3
CBWD3-201ENST00000360171 FGFRL1Q8N441 504 aa16.93■□□□□ 0.3
CBWD3-201ENST00000360171 PFDN5Q99471 154 aa16.93■□□□□ 0.3
CBWD3-201ENST00000360171 PYGO2Q9BRQ0 406 aa16.93■□□□□ 0.3
CBWD3-201ENST00000360171 C3orf80F5H4A9 247 aa16.92■□□□□ 0.3
CBWD3-201ENST00000360171 TMEM250H0YL14 139 aa16.92■□□□□ 0.3
CBWD3-201ENST00000360171 ZNF737O75373 536 aa16.92■□□□□ 0.3
CBWD3-201ENST00000360171 TNFRSF9Q07011 255 aa16.92■□□□□ 0.3
CBWD3-201ENST00000360171 ZNF383Q8NA42 475 aa16.92■□□□□ 0.3
CBWD3-201ENST00000360171 WFIKKN1Q96NZ8 548 aa16.92■□□□□ 0.3
CBWD3-201ENST00000360171 RBKSQ9H477 322 aa16.92■□□□□ 0.3
CBWD3-201ENST00000360171 MSL2Q9HCI7 577 aa16.92■□□□□ 0.3
CBWD3-201ENST00000360171 SLC39A9Q9NUM3 307 aa16.92■□□□□ 0.3
CBWD3-201ENST00000360171 PITPNC1Q9UKF7 332 aa16.92■□□□□ 0.3
CBWD3-201ENST00000360171 TRBV23-1A0A0A0MS06 115 aa16.92■□□□□ 0.3
CBWD3-201ENST00000360171 IGHV3-64DA0A0J9YX35 117 aa16.92■□□□□ 0.3
CBWD3-201ENST00000360171 SIRPB1O00241 398 aa16.92■□□□□ 0.3
CBWD3-201ENST00000360171 GLRXP35754 106 aa16.92■□□□□ 0.3
CBWD3-201ENST00000360171 MEF2BQ02080 365 aaPredicted RBP16.92■□□□□ 0.3
CBWD3-201ENST00000360171 VHLLQ6RSH7 139 aa16.92■□□□□ 0.3
CBWD3-201ENST00000360171 LHX4Q969G2 390 aa16.92■□□□□ 0.3
CBWD3-201ENST00000360171 PRDM13Q9H4Q3 707 aa16.92■□□□□ 0.3
CBWD3-201ENST00000360171 DPRXA6NFQ7 191 aa16.91■□□□□ 0.3
CBWD3-201ENST00000360171 MBP02144 154 aa16.91■□□□□ 0.3
CBWD3-201ENST00000360171 P0C879 139 aa16.91■□□□□ 0.3
CBWD3-201ENST00000360171 PGA5P0DJD9 388 aa16.91■□□□□ 0.3
CBWD3-201ENST00000360171 MSMO1Q15800 293 aa16.91■□□□□ 0.3
CBWD3-201ENST00000360171 RPP25LQ8N5L8 163 aaKnown RBP16.91■□□□□ 0.3
CBWD3-201ENST00000360171 SCCPDHQ8NBX0 429 aa16.91■□□□□ 0.3
CBWD3-201ENST00000360171 SRD5A3Q9H8P0 318 aa16.91■□□□□ 0.3
CBWD3-201ENST00000360171 GFOD1Q9NXC2 390 aa16.91■□□□□ 0.3
CBWD3-201ENST00000360171 SMG1Q96Q15 3661 aaKnown RBP16.91■□□□□ 0.3
CBWD3-201ENST00000360171 SH2D1BO14796 132 aa16.91■□□□□ 0.3
CBWD3-201ENST00000360171 KBTBD11O94819 623 aa16.91■□□□□ 0.3
CBWD3-201ENST00000360171 ZNF16P17020 682 aaPredicted RBP16.91■□□□□ 0.3
CBWD3-201ENST00000360171 CEACAM6P40199 344 aa16.91■□□□□ 0.3
CBWD3-201ENST00000360171 GFI1BQ5VTD9 330 aa16.91■□□□□ 0.3
CBWD3-201ENST00000360171 NCR3LG1Q68D85 454 aa16.91■□□□□ 0.3
CBWD3-201ENST00000360171 TMEM108Q6UXF1 575 aa16.91■□□□□ 0.3
CBWD3-201ENST00000360171 ZNF645Q8N7E2 425 aa16.91■□□□□ 0.3
CBWD3-201ENST00000360171 OR10A7Q8NGE5 316 aa16.91■□□□□ 0.3
CBWD3-201ENST00000360171 SMIM7Q9BQ49 75 aa16.91■□□□□ 0.3
CBWD3-201ENST00000360171 CTXND1A0A1B0GTU2 59 aa16.9■□□□□ 0.3
CBWD3-201ENST00000360171 UBE2L5PA0A1B0GUS4 154 aa16.9■□□□□ 0.3
CBWD3-201ENST00000360171 GRNP28799 593 aaKnown RBP16.9■□□□□ 0.3
CBWD3-201ENST00000360171 TMEM241Q24JQ0 296 aa16.9■□□□□ 0.3
CBWD3-201ENST00000360171 FBXL19-AS1Q494R0 122 aa16.9■□□□□ 0.3
CBWD3-201ENST00000360171 TGIF2LYQ8IUE0 185 aa16.9■□□□□ 0.3
CBWD3-201ENST00000360171 PRR18Q8N4B5 295 aa16.9■□□□□ 0.3
CBWD3-201ENST00000360171 DUSP13Q9UII6 198 aa16.9■□□□□ 0.3
CBWD3-201ENST00000360171 HIVEP3Q5T1R4 2406 aa16.9■□□□□ 0.3
CBWD3-201ENST00000360171 TRAV39A0A0B4J263 110 aa16.89■□□□□ 0.3
CBWD3-201ENST00000360171 PFN1P07737 140 aaKnown RBP16.89■□□□□ 0.3
CBWD3-201ENST00000360171 BSPH1Q075Z2 132 aa16.89■□□□□ 0.3
CBWD3-201ENST00000360171 TMEM147Q9BVK8 224 aa16.89■□□□□ 0.3
CBWD3-201ENST00000360171 MRPL37Q9BZE1 423 aaKnown RBP16.89■□□□□ 0.3
CBWD3-201ENST00000360171 A0A1B0GWJ7 208 aa16.89■□□□□ 0.29
CBWD3-201ENST00000360171 ELLP55199 621 aaPredicted RBP16.89■□□□□ 0.29
CBWD3-201ENST00000360171 EIF4EBP1Q13541 118 aaPredicted RBP16.89■□□□□ 0.29
CBWD3-201ENST00000360171 TCTEX1D1Q8N7M0 179 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms