RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 H7C2Y5 167 aa9.93□□□□□ -0.82
NIF3L1-201ENST00000359683 B3GALNT1O75752 331 aa9.93□□□□□ -0.82
NIF3L1-201ENST00000359683 IGKV1D-33P01593 117 aa9.93□□□□□ -0.82
NIF3L1-201ENST00000359683 IGKV1-33P01594 117 aa9.93□□□□□ -0.82
NIF3L1-201ENST00000359683 IGHV4-59P01825 116 aa9.93□□□□□ -0.82
NIF3L1-201ENST00000359683 H2AFB2P0C5Z0 115 aa9.93□□□□□ -0.82
NIF3L1-201ENST00000359683 SPNP16150 400 aa9.93□□□□□ -0.82
NIF3L1-201ENST00000359683 AKR1C4P17516 323 aa9.93□□□□□ -0.82
NIF3L1-201ENST00000359683 TAS2R31P59538 309 aa9.93□□□□□ -0.82
NIF3L1-201ENST00000359683 UBE2MP61081 183 aaKnown RBP9.93□□□□□ -0.82
NIF3L1-201ENST00000359683 SUPT4H1P63272 117 aaKnown RBP9.93□□□□□ -0.82
NIF3L1-201ENST00000359683 RTL8BQ17RB0 113 aa9.93□□□□□ -0.82
NIF3L1-201ENST00000359683 RGS21Q2M5E4 152 aa9.93□□□□□ -0.82
NIF3L1-201ENST00000359683 ZNF585BQ52M93 769 aa9.93□□□□□ -0.82
NIF3L1-201ENST00000359683 FBLN7Q53RD9 439 aa9.93□□□□□ -0.82
NIF3L1-201ENST00000359683 TMEM177Q53S58 311 aa9.93□□□□□ -0.82
NIF3L1-201ENST00000359683 DHRS7BQ6IAN0 325 aaPredicted RBP9.93□□□□□ -0.82
NIF3L1-201ENST00000359683 PLET1Q6UQ28 207 aa9.93□□□□□ -0.82
NIF3L1-201ENST00000359683 RBMS3Q6XE24 437 aaKnown RBP9.93□□□□□ -0.82
NIF3L1-201ENST00000359683 SGPP2Q8IWX5 399 aa9.93□□□□□ -0.82
NIF3L1-201ENST00000359683 SPAG16Q8N0X2 631 aa9.93□□□□□ -0.82
NIF3L1-201ENST00000359683 TMEM86BQ8N661 226 aa9.93□□□□□ -0.82
NIF3L1-201ENST00000359683 Q8N6K4 173 aa9.93□□□□□ -0.82
NIF3L1-201ENST00000359683 OR2T10Q8NGZ9 312 aa9.93□□□□□ -0.82
NIF3L1-201ENST00000359683 OR5R1Q8NH85 324 aa9.93□□□□□ -0.82
NIF3L1-201ENST00000359683 SSMEM1Q8WWF3 244 aa9.93□□□□□ -0.82
NIF3L1-201ENST00000359683 RBMXL1Q96E39 390 aaKnown RBP9.93□□□□□ -0.82
NIF3L1-201ENST00000359683 GALNT14Q96FL9 552 aa9.93□□□□□ -0.82
NIF3L1-201ENST00000359683 EAF1Q96JC9 268 aaPredicted RBP9.93□□□□□ -0.82
NIF3L1-201ENST00000359683 RNF5Q99942 180 aa9.93□□□□□ -0.82
NIF3L1-201ENST00000359683 MARVELD1Q9BSK0 173 aa9.93□□□□□ -0.82
NIF3L1-201ENST00000359683 LIN7CQ9NUP9 197 aaKnown RBP9.93□□□□□ -0.82
NIF3L1-201ENST00000359683 TCF19Q9Y242 345 aa9.93□□□□□ -0.82
NIF3L1-201ENST00000359683 COL6A5A8TX70 2615 aa9.93□□□□□ -0.82
NIF3L1-201ENST00000359683 FBN3Q75N90 2809 aa9.93□□□□□ -0.82
NIF3L1-201ENST00000359683 A6NDX4 124 aa9.93□□□□□ -0.82
NIF3L1-201ENST00000359683 H0Y980 276 aa9.93□□□□□ -0.82
NIF3L1-201ENST00000359683 HOXA3O43365 443 aaPredicted RBP9.93□□□□□ -0.82
NIF3L1-201ENST00000359683 MOSP00540 346 aa9.93□□□□□ -0.82
NIF3L1-201ENST00000359683 IGKV1-16P04430 117 aa9.93□□□□□ -0.82
NIF3L1-201ENST00000359683 ANXA7P20073 488 aaKnown RBP9.93□□□□□ -0.82
NIF3L1-201ENST00000359683 RAG2P55895 527 aa9.93□□□□□ -0.82
NIF3L1-201ENST00000359683 OR2B11Q5JQS5 317 aa9.93□□□□□ -0.82
NIF3L1-201ENST00000359683 CCBE1Q6UXH8 406 aaPredicted RBP9.93□□□□□ -0.82
NIF3L1-201ENST00000359683 OR4C13Q8NGP0 309 aa9.93□□□□□ -0.82
NIF3L1-201ENST00000359683 ZNF418Q8TF45 676 aaPredicted RBP9.93□□□□□ -0.82
NIF3L1-201ENST00000359683 GLYATL2Q8WU03 294 aa9.93□□□□□ -0.82
NIF3L1-201ENST00000359683 FLYWCH2Q96CP2 140 aaKnown RBP9.93□□□□□ -0.82
NIF3L1-201ENST00000359683 RITA1Q96K30 269 aa9.93□□□□□ -0.82
NIF3L1-201ENST00000359683 TP53RKQ96S44 253 aa9.93□□□□□ -0.82
NIF3L1-201ENST00000359683 KCNIP3Q9Y2W7 256 aa9.93□□□□□ -0.82
NIF3L1-201ENST00000359683 POMT1Q9Y6A1 747 aa9.93□□□□□ -0.82
NIF3L1-201ENST00000359683 RAMP3O60896 148 aa9.92□□□□□ -0.82
NIF3L1-201ENST00000359683 CRYZL1O95825 349 aa9.92□□□□□ -0.82
NIF3L1-201ENST00000359683 VSIG10L2P0DP72 767 aa9.92□□□□□ -0.82
NIF3L1-201ENST00000359683 UCP1P25874 307 aa9.92□□□□□ -0.82
NIF3L1-201ENST00000359683 PPP1R1AQ13522 171 aa9.92□□□□□ -0.82
NIF3L1-201ENST00000359683 HES1Q14469 280 aa9.92□□□□□ -0.82
NIF3L1-201ENST00000359683 HNF4GQ14541 408 aa9.92□□□□□ -0.82
NIF3L1-201ENST00000359683 OXA1LQ15070 435 aa9.92□□□□□ -0.82
NIF3L1-201ENST00000359683 SP6Q3SY56 376 aa9.92□□□□□ -0.82
NIF3L1-201ENST00000359683 C11orf88Q6PI97 169 aa9.92□□□□□ -0.82
NIF3L1-201ENST00000359683 OR4S2Q8NH73 311 aa9.92□□□□□ -0.82
NIF3L1-201ENST00000359683 OSR1Q8TAX0 266 aaPredicted RBP9.92□□□□□ -0.82
NIF3L1-201ENST00000359683 PLEKHA2Q9HB19 425 aa9.92□□□□□ -0.82
NIF3L1-201ENST00000359683 INMT-MINDY4F8WBC2 141 aa9.91□□□□□ -0.82
NIF3L1-201ENST00000359683 CLDN34H7C241 214 aa9.91□□□□□ -0.82
NIF3L1-201ENST00000359683 PEX14O75381 377 aa9.91□□□□□ -0.82
NIF3L1-201ENST00000359683 SFT2D2O95562 160 aa9.91□□□□□ -0.82
NIF3L1-201ENST00000359683 HPRT1P00492 218 aa9.91□□□□□ -0.82
NIF3L1-201ENST00000359683 IFNA2P01563 188 aa9.91□□□□□ -0.82
NIF3L1-201ENST00000359683 OR5AC1P0C628 307 aa9.91□□□□□ -0.82
NIF3L1-201ENST00000359683 OR4E1P0C645 316 aa9.91□□□□□ -0.82
NIF3L1-201ENST00000359683 TMEM11P17152 192 aa9.91□□□□□ -0.82
NIF3L1-201ENST00000359683 LPAR6P43657 344 aa9.91□□□□□ -0.82
NIF3L1-201ENST00000359683 LGALS7P47929 136 aa9.91□□□□□ -0.82
NIF3L1-201ENST00000359683 HILS1P60008 231 aa9.91□□□□□ -0.82
NIF3L1-201ENST00000359683 CBX3Q13185 183 aa9.91□□□□□ -0.82
NIF3L1-201ENST00000359683 TMEM187Q14656 261 aa9.91□□□□□ -0.82
NIF3L1-201ENST00000359683 SLC9A3R2Q15599 337 aa9.91□□□□□ -0.82
NIF3L1-201ENST00000359683 RBM14Q96PK6 669 aaKnown RBP9.91□□□□□ -0.82
NIF3L1-201ENST00000359683 TMEM222Q9H0R3 208 aa9.91□□□□□ -0.82
NIF3L1-201ENST00000359683 ESM1Q9NQ30 184 aa9.91□□□□□ -0.82
NIF3L1-201ENST00000359683 PLSCR3Q9NRY6 295 aa9.91□□□□□ -0.82
NIF3L1-201ENST00000359683 PITPNC1Q9UKF7 332 aa9.91□□□□□ -0.82
NIF3L1-201ENST00000359683 FBN1P35555 2871 aaKnown RBP9.91□□□□□ -0.82
NIF3L1-201ENST00000359683 A0A0A6YYJ9 748 aa9.9□□□□□ -0.82
NIF3L1-201ENST00000359683 C9orf170A2RU37 121 aa9.9□□□□□ -0.82
NIF3L1-201ENST00000359683 BTBD17A6NE02 478 aa9.9□□□□□ -0.82
NIF3L1-201ENST00000359683 SRRM4A7MD48 611 aaKnown RBP9.9□□□□□ -0.82
NIF3L1-201ENST00000359683 CDS2O95674 445 aa9.9□□□□□ -0.82
NIF3L1-201ENST00000359683 IL5P05113 134 aa9.9□□□□□ -0.82
NIF3L1-201ENST00000359683 SERPINE2P07093 398 aa9.9□□□□□ -0.82
NIF3L1-201ENST00000359683 RPA2P15927 270 aa9.9□□□□□ -0.82
NIF3L1-201ENST00000359683 F2RL1P55085 397 aa9.9□□□□□ -0.82
NIF3L1-201ENST00000359683 RAB25P57735 213 aa9.9□□□□□ -0.82
NIF3L1-201ENST00000359683 RPS16P62249 146 aaKnown RBP9.9□□□□□ -0.82
NIF3L1-201ENST00000359683 LY6EQ16553 131 aa9.9□□□□□ -0.82
NIF3L1-201ENST00000359683 NPBQ8NG41 125 aa9.9□□□□□ -0.82
NIF3L1-201ENST00000359683 OR8H1Q8NGG4 311 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms