RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 ODAMA1E959 279 aa15.76■□□□□ 0.11
SHANK1-202ENST00000359082 HLA-DQA1P01909 254 aa15.76■□□□□ 0.11
SHANK1-202ENST00000359082 HLA-DQB1P01920 261 aa15.76■□□□□ 0.11
SHANK1-202ENST00000359082 SOD3P08294 240 aa15.76■□□□□ 0.11
SHANK1-202ENST00000359082 KIAA1644Q3SXP7 199 aa15.76■□□□□ 0.11
SHANK1-202ENST00000359082 STRCP1A6NGW2 1772 aa15.76■□□□□ 0.11
SHANK1-202ENST00000359082 UBR3Q6ZT12 1888 aa15.76■□□□□ 0.11
SHANK1-202ENST00000359082 PF4P02776 101 aa15.75■□□□□ 0.11
SHANK1-202ENST00000359082 NGFRP08138 427 aa15.75■□□□□ 0.11
SHANK1-202ENST00000359082 OR4D5Q8NGN0 318 aa15.75■□□□□ 0.11
SHANK1-202ENST00000359082 CACNA1CQ13936 2221 aa15.75■□□□□ 0.11
SHANK1-202ENST00000359082 CDCP2Q5VXM1 449 aa15.75■□□□□ 0.11
SHANK1-202ENST00000359082 DDA1Q9BW61 102 aa15.75■□□□□ 0.11
SHANK1-202ENST00000359082 TNFRSF9Q07011 255 aa15.75■□□□□ 0.11
SHANK1-202ENST00000359082 C19orf48Q6RUI8 117 aa15.75■□□□□ 0.11
SHANK1-202ENST00000359082 PNKDQ8N490 385 aa15.75■□□□□ 0.11
SHANK1-202ENST00000359082 KLF14Q8TD94 323 aaPredicted RBP15.75■□□□□ 0.11
SHANK1-202ENST00000359082 PARD6GQ9BYG4 376 aaPredicted RBP15.75■□□□□ 0.11
SHANK1-202ENST00000359082 GEMIN7Q9H840 131 aaKnown RBP15.75■□□□□ 0.11
SHANK1-202ENST00000359082 ZNF818PQ6ZRF7 136 aa15.75■□□□□ 0.11
SHANK1-202ENST00000359082 SCN1AP35498 2009 aa15.74■□□□□ 0.11
SHANK1-202ENST00000359082 IGHV3-35A0A0C4DH35 117 aa15.74■□□□□ 0.11
SHANK1-202ENST00000359082 FOXI3A8MTJ6 420 aaPredicted RBP15.74■□□□□ 0.11
SHANK1-202ENST00000359082 ATP5J2P56134 94 aa15.74■□□□□ 0.11
SHANK1-202ENST00000359082 IFITM3Q01628 133 aa15.74■□□□□ 0.11
SHANK1-202ENST00000359082 PMCHL1Q16048 86 aa15.74■□□□□ 0.11
SHANK1-202ENST00000359082 MARCH11A6NNE9 402 aa15.74■□□□□ 0.11
SHANK1-202ENST00000359082 LHFPL6Q9Y693 200 aa15.74■□□□□ 0.11
SHANK1-202ENST00000359082 A0A0B4J293 547 aa15.74■□□□□ 0.11
SHANK1-202ENST00000359082 C8orf88P0DMB2 117 aa15.74■□□□□ 0.11
SHANK1-202ENST00000359082 FUT5Q11128 374 aa15.74■□□□□ 0.11
SHANK1-202ENST00000359082 COPS9Q8WXC6 57 aa15.74■□□□□ 0.11
SHANK1-202ENST00000359082 FAM206AQ9NX38 181 aa15.74■□□□□ 0.11
SHANK1-202ENST00000359082 PILRAQ9UKJ1 303 aa15.74■□□□□ 0.11
SHANK1-202ENST00000359082 COL24A1Q17RW2 1714 aa15.74■□□□□ 0.11
SHANK1-202ENST00000359082 PSMB11A5LHX3 300 aa15.74■□□□□ 0.11
SHANK1-202ENST00000359082 GLIPR1P48060 266 aa15.74■□□□□ 0.11
SHANK1-202ENST00000359082 MOSP00540 346 aa15.74■□□□□ 0.11
SHANK1-202ENST00000359082 HIST1H1AQ02539 215 aaPredicted RBP15.74■□□□□ 0.11
SHANK1-202ENST00000359082 MESP2Q0VG99 397 aa15.74■□□□□ 0.11
SHANK1-202ENST00000359082 TSPAN13O95857 204 aa15.73■□□□□ 0.11
SHANK1-202ENST00000359082 NMBP08949 121 aa15.73■□□□□ 0.11
SHANK1-202ENST00000359082 FOLR2P14207 255 aa15.73■□□□□ 0.11
SHANK1-202ENST00000359082 PUSL1Q8N0Z8 303 aaKnown RBP15.73■□□□□ 0.11
SHANK1-202ENST00000359082 RNF115Q9Y4L5 304 aa15.73■□□□□ 0.11
SHANK1-202ENST00000359082 TTC32Q5I0X7 151 aa15.73■□□□□ 0.11
SHANK1-202ENST00000359082 GOLT1AQ6ZVE7 132 aa15.73■□□□□ 0.11
SHANK1-202ENST00000359082 ZCCHC14Q8WYQ9 949 aaKnown RBP15.73■□□□□ 0.11
SHANK1-202ENST00000359082 ISG15P05161 165 aa15.73■□□□□ 0.11
SHANK1-202ENST00000359082 ADAMTSL1Q8N6G6 1762 aa15.73■□□□□ 0.11
SHANK1-202ENST00000359082 IGLV1-36A0A0B4J1U3 117 aa15.73■□□□□ 0.11
SHANK1-202ENST00000359082 C17orf51A8MQB3 221 aa15.73■□□□□ 0.11
SHANK1-202ENST00000359082 ZNF660Q6AZW8 331 aaPredicted RBP15.73■□□□□ 0.11
SHANK1-202ENST00000359082 OR4C13Q8NGP0 309 aa15.73■□□□□ 0.11
SHANK1-202ENST00000359082 GRIFINA4D1Z8 144 aa15.73■□□□□ 0.11
SHANK1-202ENST00000359082 NPIPB8E9PQR5 432 aa15.73■□□□□ 0.11
SHANK1-202ENST00000359082 IFNL4K9M1U5 179 aa15.73■□□□□ 0.11
SHANK1-202ENST00000359082 HSPE1P61604 102 aaKnown RBP15.73■□□□□ 0.11
SHANK1-202ENST00000359082 JOSD1Q15040 202 aaPredicted RBP15.73■□□□□ 0.11
SHANK1-202ENST00000359082 SP7Q8TDD2 431 aaPredicted RBP15.73■□□□□ 0.11
SHANK1-202ENST00000359082 MRPS16Q9Y3D3 137 aaKnown RBP15.73■□□□□ 0.11
SHANK1-202ENST00000359082 IGHV1-69-2A0A0G2JMI3 117 aa15.72■□□□□ 0.11
SHANK1-202ENST00000359082 CXorf65A6NEN9 183 aa15.72■□□□□ 0.11
SHANK1-202ENST00000359082 AGAP20933 346 aa15.72■□□□□ 0.11
SHANK1-202ENST00000359082 PKIBQ9C010 78 aa15.72■□□□□ 0.11
SHANK1-202ENST00000359082 C9JCJ5 164 aa15.72■□□□□ 0.11
SHANK1-202ENST00000359082 NPPCP23582 126 aa15.72■□□□□ 0.11
SHANK1-202ENST00000359082 PDLIM4P50479 330 aa15.72■□□□□ 0.11
SHANK1-202ENST00000359082 C12orf54Q6X4T0 127 aa15.72■□□□□ 0.11
SHANK1-202ENST00000359082 WFDC6Q9BQY6 131 aa15.72■□□□□ 0.11
SHANK1-202ENST00000359082 IGHV3OR16-13A0A075B7E8 117 aa15.72■□□□□ 0.11
SHANK1-202ENST00000359082 IGHV3-74A0A0B4J1X5 117 aa15.72■□□□□ 0.11
SHANK1-202ENST00000359082 DDTP30046 118 aa15.72■□□□□ 0.11
SHANK1-202ENST00000359082 TSPOP30536 169 aa15.72■□□□□ 0.11
SHANK1-202ENST00000359082 SLC25A34Q6PIV7 304 aa15.72■□□□□ 0.11
SHANK1-202ENST00000359082 BIVMQ86UB2 503 aa15.72■□□□□ 0.11
SHANK1-202ENST00000359082 OR10AG1Q8NH19 301 aa15.72■□□□□ 0.11
SHANK1-202ENST00000359082 FAM131CQ96AQ9 280 aa15.72■□□□□ 0.11
SHANK1-202ENST00000359082 PPP1R3EQ9H7J1 279 aa15.72■□□□□ 0.11
SHANK1-202ENST00000359082 NPBWR2P48146 333 aa15.72■□□□□ 0.11
SHANK1-202ENST00000359082 SNRPD3P62318 126 aaKnown RBP15.72■□□□□ 0.11
SHANK1-202ENST00000359082 UQCR10Q9UDW1 63 aa15.72■□□□□ 0.11
SHANK1-202ENST00000359082 S4R3C0 116 aa15.72■□□□□ 0.11
SHANK1-202ENST00000359082 MIA3Q5JRA6 1907 aa15.72■□□□□ 0.11
SHANK1-202ENST00000359082 SPSB4Q96A44 273 aa15.72■□□□□ 0.11
SHANK1-202ENST00000359082 SSBP3Q9BWW4 388 aaPredicted RBP15.72■□□□□ 0.11
SHANK1-202ENST00000359082 CLEC7AQ9BXN2 247 aa15.72■□□□□ 0.11
SHANK1-202ENST00000359082 JPT1Q9UK76 154 aa15.72■□□□□ 0.11
SHANK1-202ENST00000359082 ADAMTS7Q9UKP4 1686 aa15.71■□□□□ 0.11
SHANK1-202ENST00000359082 OR51G1Q8NGK1 321 aa15.71■□□□□ 0.11
SHANK1-202ENST00000359082 NPIPB11E5RHQ5 1161 aa15.71■□□□□ 0.11
SHANK1-202ENST00000359082 COX6A1P12074 109 aa15.71■□□□□ 0.11
SHANK1-202ENST00000359082 SUMO2P61956 95 aaKnown RBP15.71■□□□□ 0.11
SHANK1-202ENST00000359082 TGIF1Q15583 401 aa15.71■□□□□ 0.11
SHANK1-202ENST00000359082 ERASQ7Z444 233 aa15.71■□□□□ 0.11
SHANK1-202ENST00000359082 FAM159AQ6UWV7 190 aa15.71■□□□□ 0.11
SHANK1-202ENST00000359082 LINC00305Q7Z4B0 112 aa15.71■□□□□ 0.11
SHANK1-202ENST00000359082 TMEM160Q9NX00 188 aa15.71■□□□□ 0.11
SHANK1-202ENST00000359082 TRBV20OR9-2A0A075B6H5 130 aa15.71■□□□□ 0.11
SHANK1-202ENST00000359082 NDUFA2O43678 99 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms