RNA–Protein interactions for RNA: ENST00000358771.4

SIRPA-202, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-202ENST00000358771 TRAV38-1A0A0B4J264 116 aa11.95□□□□□ -0.5
SIRPA-202ENST00000358771 FAM87AP0C7U9 286 aa11.95□□□□□ -0.5
SIRPA-202ENST00000358771 GLRXP35754 106 aa11.95□□□□□ -0.5
SIRPA-202ENST00000358771 PRB3Q04118 309 aaPredicted RBP11.95□□□□□ -0.5
SIRPA-202ENST00000358771 TMEM241Q24JQ0 296 aa11.95□□□□□ -0.5
SIRPA-202ENST00000358771 PCSK4Q6UW60 755 aa11.95□□□□□ -0.5
SIRPA-202ENST00000358771 LILRB1Q8NHL6 650 aaPredicted RBP11.95□□□□□ -0.5
SIRPA-202ENST00000358771 CHD8Q9HCK8 2581 aa11.95□□□□□ -0.5
SIRPA-202ENST00000358771 PIEZO1Q92508 2521 aa11.95□□□□□ -0.5
SIRPA-202ENST00000358771 CLDN34H7C241 214 aa11.95□□□□□ -0.5
SIRPA-202ENST00000358771 CNIH1O95406 144 aa11.95□□□□□ -0.5
SIRPA-202ENST00000358771 BCL2P10415 239 aa11.95□□□□□ -0.5
SIRPA-202ENST00000358771 RPL30P62888 115 aaKnown RBP11.95□□□□□ -0.5
SIRPA-202ENST00000358771 TIMM23BQ5SRD1 257 aa11.95□□□□□ -0.5
SIRPA-202ENST00000358771 TMEM37Q8WXS4 190 aa11.95□□□□□ -0.5
SIRPA-202ENST00000358771 LSM10Q969L4 123 aaKnown RBP11.95□□□□□ -0.5
SIRPA-202ENST00000358771 UHRF2Q96PU4 802 aa11.95□□□□□ -0.5
SIRPA-202ENST00000358771 QTRT1Q9BXR0 403 aaKnown RBP11.95□□□□□ -0.5
SIRPA-202ENST00000358771 SSUH2Q9Y2M2 353 aa11.95□□□□□ -0.5
SIRPA-202ENST00000358771 NOTCH3Q9UM47 2321 aa11.95□□□□□ -0.5
SIRPA-202ENST00000358771 TMEM50AO95807 157 aa11.95□□□□□ -0.5
SIRPA-202ENST00000358771 IGHV3-48P01763 117 aa11.95□□□□□ -0.5
SIRPA-202ENST00000358771 ERHP84090 104 aaKnown RBP11.95□□□□□ -0.5
SIRPA-202ENST00000358771 USF2Q15853 346 aaPredicted RBP11.95□□□□□ -0.5
SIRPA-202ENST00000358771 NMSQ5H8A3 153 aa11.95□□□□□ -0.5
SIRPA-202ENST00000358771 Q6P435 159 aa11.95□□□□□ -0.5
SIRPA-202ENST00000358771 KCNIP4Q6PIL6 250 aa11.95□□□□□ -0.5
SIRPA-202ENST00000358771 MOB3BQ86TA1 216 aa11.95□□□□□ -0.5
SIRPA-202ENST00000358771 SLC35E1Q96K37 410 aa11.95□□□□□ -0.5
SIRPA-202ENST00000358771 BARX1Q9HBU1 254 aaPredicted RBP11.95□□□□□ -0.5
SIRPA-202ENST00000358771 CARHSP1Q9Y2V2 147 aaKnown RBP11.95□□□□□ -0.5
SIRPA-202ENST00000358771 ARHGAP21Q5T5U3 1957 aa11.95□□□□□ -0.5
SIRPA-202ENST00000358771 CEACAM1P13688 526 aa11.94□□□□□ -0.5
SIRPA-202ENST00000358771 CD1BP29016 333 aa11.94□□□□□ -0.5
SIRPA-202ENST00000358771 TMEM41BQ5BJD5 291 aa11.94□□□□□ -0.5
SIRPA-202ENST00000358771 RCC1LQ96I51 464 aaKnown RBP11.94□□□□□ -0.5
SIRPA-202ENST00000358771 FAM210BQ96KR6 192 aa11.94□□□□□ -0.5
SIRPA-202ENST00000358771 SLC25A10Q9UBX3 287 aaPredicted RBP11.94□□□□□ -0.5
SIRPA-202ENST00000358771 VAX2Q9UIW0 290 aa11.94□□□□□ -0.5
SIRPA-202ENST00000358771 TNCP24821 2201 aa11.94□□□□□ -0.5
SIRPA-202ENST00000358771 SPINK4O60575 86 aa11.94□□□□□ -0.5
SIRPA-202ENST00000358771 CRIP3Q6Q6R5 217 aa11.94□□□□□ -0.5
SIRPA-202ENST00000358771 VSIRQ9H7M9 311 aa11.94□□□□□ -0.5
SIRPA-202ENST00000358771 A8MXE2 369 aa11.94□□□□□ -0.5
SIRPA-202ENST00000358771 C11orf94C9JXX5 98 aa11.94□□□□□ -0.5
SIRPA-202ENST00000358771 HPRT1P00492 218 aa11.94□□□□□ -0.5
SIRPA-202ENST00000358771 IGKV1-5P01602 117 aa11.94□□□□□ -0.5
SIRPA-202ENST00000358771 HTD2P86397 168 aa11.94□□□□□ -0.5
SIRPA-202ENST00000358771 MST1LQ2TV78 715 aa11.94□□□□□ -0.5
SIRPA-202ENST00000358771 HARBI1Q96MB7 349 aa11.94□□□□□ -0.5
SIRPA-202ENST00000358771 SPRY4Q9C004 299 aa11.94□□□□□ -0.5
SIRPA-202ENST00000358771 ATP6V1FQ16864 119 aa11.94□□□□□ -0.5
SIRPA-202ENST00000358771 KHDC3LQ587J8 217 aa11.94□□□□□ -0.5
SIRPA-202ENST00000358771 TMEM140Q9NV12 185 aa11.94□□□□□ -0.5
SIRPA-202ENST00000358771 RAB29O14966 203 aa11.93□□□□□ -0.5
SIRPA-202ENST00000358771 NPY1RP25929 384 aa11.93□□□□□ -0.5
SIRPA-202ENST00000358771 SSTP61278 116 aa11.93□□□□□ -0.5
SIRPA-202ENST00000358771 SERF2P84101 59 aa11.93□□□□□ -0.5
SIRPA-202ENST00000358771 ZNF146Q15072 292 aa11.93□□□□□ -0.5
SIRPA-202ENST00000358771 HFEQ30201 348 aa11.93□□□□□ -0.5
SIRPA-202ENST00000358771 MRGPRGQ86SM5 289 aa11.93□□□□□ -0.5
SIRPA-202ENST00000358771 RAB24Q969Q5 203 aa11.93□□□□□ -0.5
SIRPA-202ENST00000358771 RALYQ9UKM9 306 aaKnown RBP11.93□□□□□ -0.5
SIRPA-202ENST00000358771 S100A12P80511 92 aa11.93□□□□□ -0.5
SIRPA-202ENST00000358771 BSXQ3C1V8 233 aa11.93□□□□□ -0.5
SIRPA-202ENST00000358771 FAM78BQ5VT40 261 aa11.93□□□□□ -0.5
SIRPA-202ENST00000358771 MIC13Q5XKP0 118 aa11.93□□□□□ -0.5
SIRPA-202ENST00000358771 MRPL37Q9BZE1 423 aaKnown RBP11.93□□□□□ -0.5
SIRPA-202ENST00000358771 J3QR06 171 aa11.93□□□□□ -0.5
SIRPA-202ENST00000358771 OPRK1P41145 380 aa11.93□□□□□ -0.5
SIRPA-202ENST00000358771 B2MP61769 119 aa11.93□□□□□ -0.5
SIRPA-202ENST00000358771 KRTCAP3Q53RY4 240 aa11.93□□□□□ -0.5
SIRPA-202ENST00000358771 ZNF66Q6ZN08 573 aa11.93□□□□□ -0.5
SIRPA-202ENST00000358771 SLC35E3Q7Z769 313 aa11.93□□□□□ -0.5
SIRPA-202ENST00000358771 WDR31Q8NA23 367 aa11.93□□□□□ -0.5
SIRPA-202ENST00000358771 GAL3ST2Q9H3Q3 398 aa11.93□□□□□ -0.5
SIRPA-202ENST00000358771 IGHV3-21A0A0B4J1V1 117 aa11.92□□□□□ -0.5
SIRPA-202ENST00000358771 DVL1O14640 695 aa11.92□□□□□ -0.5
SIRPA-202ENST00000358771 CD40P25942 277 aa11.92□□□□□ -0.5
SIRPA-202ENST00000358771 TFF3Q07654 80 aa11.92□□□□□ -0.5
SIRPA-202ENST00000358771 DHRS7BQ6IAN0 325 aaPredicted RBP11.92□□□□□ -0.5
SIRPA-202ENST00000358771 HIST1H2BAQ96A08 127 aa11.92□□□□□ -0.5
SIRPA-202ENST00000358771 ZNF251Q9BRH9 671 aa11.92□□□□□ -0.5
SIRPA-202ENST00000358771 TCEAL7Q9BRU2 100 aa11.92□□□□□ -0.5
SIRPA-202ENST00000358771 WDR61Q9GZS3 305 aaKnown RBP11.92□□□□□ -0.5
SIRPA-202ENST00000358771 ASCL3Q9NQ33 180 aa11.92□□□□□ -0.5
SIRPA-202ENST00000358771 KCNIP2Q9NS61 270 aa11.92□□□□□ -0.5
SIRPA-202ENST00000358771 USP34Q70CQ2 3546 aa11.92□□□□□ -0.5
SIRPA-202ENST00000358771 PPIAL4EA0A075B759 164 aa11.92□□□□□ -0.5
SIRPA-202ENST00000358771 ZNF320A2RRD8 509 aa11.92□□□□□ -0.5
SIRPA-202ENST00000358771 PPIAL4DF5H284 164 aa11.92□□□□□ -0.5
SIRPA-202ENST00000358771 K7N7A8 449 aa11.92□□□□□ -0.5
SIRPA-202ENST00000358771 TOX4O94842 621 aa11.92□□□□□ -0.5
SIRPA-202ENST00000358771 PPIAL4FP0DN26 164 aa11.92□□□□□ -0.5
SIRPA-202ENST00000358771 MRPL41Q8IXM3 137 aaKnown RBP11.92□□□□□ -0.5
SIRPA-202ENST00000358771 C1orf162Q8NEQ5 155 aaPredicted RBP11.92□□□□□ -0.5
SIRPA-202ENST00000358771 CA5BP1Q8WTZ4 195 aa11.92□□□□□ -0.5
SIRPA-202ENST00000358771 PPIAL4AQ9Y536 164 aa11.92□□□□□ -0.5
SIRPA-202ENST00000358771 CTXND1A0A1B0GTU2 59 aa11.92□□□□□ -0.5
SIRPA-202ENST00000358771 OR4P4Q8NGL7 312 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms