RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 REG1BP48304 166 aa14.73□□□□□ -0.05
SMARCD3-202ENST00000356800 LDLRAD2Q5SZI1 272 aa14.73□□□□□ -0.05
SMARCD3-202ENST00000356800 TMEM186Q96B77 213 aa14.73□□□□□ -0.05
SMARCD3-202ENST00000356800 RBMXL1Q96E39 390 aaKnown RBP14.73□□□□□ -0.05
SMARCD3-202ENST00000356800 PCGF1Q9BSM1 259 aa14.73□□□□□ -0.05
SMARCD3-202ENST00000356800 GON7Q9BXV9 100 aa14.73□□□□□ -0.05
SMARCD3-202ENST00000356800 MRPL20Q9BYC9 149 aaKnown RBP14.73□□□□□ -0.05
SMARCD3-202ENST00000356800 HEXA-AS1Q9H8Q6 139 aa14.73□□□□□ -0.05
SMARCD3-202ENST00000356800 PRELID3BQ9Y3B1 194 aa14.73□□□□□ -0.05
SMARCD3-202ENST00000356800 PRRC2AP48634 2157 aaKnown RBP14.73□□□□□ -0.05
SMARCD3-202ENST00000356800 ODF3BA8MYP8 253 aa14.72□□□□□ -0.05
SMARCD3-202ENST00000356800 RNF223E7ERA6 249 aa14.72□□□□□ -0.05
SMARCD3-202ENST00000356800 RNASEK-C17orf49H0YIS7 233 aa14.72□□□□□ -0.05
SMARCD3-202ENST00000356800 BUB1B-PAK6H3BSN5 160 aa14.72□□□□□ -0.05
SMARCD3-202ENST00000356800 L7N2F9 121 aa14.72□□□□□ -0.05
SMARCD3-202ENST00000356800 TOX4O94842 621 aa14.72□□□□□ -0.05
SMARCD3-202ENST00000356800 IGKV1-5P01602 117 aa14.72□□□□□ -0.05
SMARCD3-202ENST00000356800 MBPP02686 304 aaPredicted RBP14.72□□□□□ -0.05
SMARCD3-202ENST00000356800 THBS3P49746 956 aa14.72□□□□□ -0.05
SMARCD3-202ENST00000356800 PAX8Q06710 450 aa14.72□□□□□ -0.05
SMARCD3-202ENST00000356800 ZNF816Q0VGE8 651 aaPredicted RBP14.72□□□□□ -0.05
SMARCD3-202ENST00000356800 THOC7Q6I9Y2 204 aaKnown RBP14.72□□□□□ -0.05
SMARCD3-202ENST00000356800 FAM71F2Q6NXP2 309 aa14.72□□□□□ -0.05
SMARCD3-202ENST00000356800 FAM219AQ8IW50 185 aa14.72□□□□□ -0.05
SMARCD3-202ENST00000356800 GPR146Q96CH1 333 aa14.72□□□□□ -0.05
SMARCD3-202ENST00000356800 RRNAD1Q96FB5 475 aaKnown RBP14.72□□□□□ -0.05
SMARCD3-202ENST00000356800 MFFQ9GZY8 342 aa14.72□□□□□ -0.05
SMARCD3-202ENST00000356800 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.72□□□□□ -0.05
SMARCD3-202ENST00000356800 A0A0G2JRQ6 117 aa14.71□□□□□ -0.05
SMARCD3-202ENST00000356800 LY6LH3BQJ8 138 aa14.71□□□□□ -0.05
SMARCD3-202ENST00000356800 FCGR3BO75015 233 aa14.71□□□□□ -0.05
SMARCD3-202ENST00000356800 PITX3O75364 302 aa14.71□□□□□ -0.05
SMARCD3-202ENST00000356800 DEDDO75618 318 aa14.71□□□□□ -0.05
SMARCD3-202ENST00000356800 S1PR2O95136 353 aa14.71□□□□□ -0.05
SMARCD3-202ENST00000356800 MSMBP08118 114 aa14.71□□□□□ -0.05
SMARCD3-202ENST00000356800 AKR1C2P52895 323 aa14.71□□□□□ -0.05
SMARCD3-202ENST00000356800 S100A10P60903 97 aa14.71□□□□□ -0.05
SMARCD3-202ENST00000356800 IFITM2Q01629 132 aa14.71□□□□□ -0.05
SMARCD3-202ENST00000356800 LOXL1Q08397 574 aaPredicted RBP14.71□□□□□ -0.05
SMARCD3-202ENST00000356800 ZNF345Q14585 488 aa14.71□□□□□ -0.05
SMARCD3-202ENST00000356800 PDZD9Q8IXQ8 264 aa14.71□□□□□ -0.05
SMARCD3-202ENST00000356800 MAPK1IP1LQ8NDC0 245 aa14.71□□□□□ -0.05
SMARCD3-202ENST00000356800 Q96MF0 132 aa14.71□□□□□ -0.05
SMARCD3-202ENST00000356800 REG4Q9BYZ8 158 aa14.71□□□□□ -0.05
SMARCD3-202ENST00000356800 PLEKHA2Q9HB19 425 aa14.71□□□□□ -0.05
SMARCD3-202ENST00000356800 MMP24Q9Y5R2 645 aa14.71□□□□□ -0.05
SMARCD3-202ENST00000356800 OR2F2O95006 317 aa14.71□□□□□ -0.06
SMARCD3-202ENST00000356800 RLN2P04090 185 aa14.71□□□□□ -0.06
SMARCD3-202ENST00000356800 ARG1P05089 322 aa14.71□□□□□ -0.06
SMARCD3-202ENST00000356800 OR2F1Q13607 317 aa14.71□□□□□ -0.06
SMARCD3-202ENST00000356800 SMCO1Q147U7 214 aa14.71□□□□□ -0.06
SMARCD3-202ENST00000356800 ACOT7LQ6ZUV0 252 aa14.71□□□□□ -0.06
SMARCD3-202ENST00000356800 DCUN1D4Q92564 292 aa14.71□□□□□ -0.06
SMARCD3-202ENST00000356800 SLA2Q9H6Q3 261 aa14.71□□□□□ -0.06
SMARCD3-202ENST00000356800 OR5AC2Q9NZP5 309 aa14.71□□□□□ -0.06
SMARCD3-202ENST00000356800 POMT1Q9Y6A1 747 aa14.71□□□□□ -0.06
SMARCD3-202ENST00000356800 A0A0D9SG52 128 aa14.7□□□□□ -0.06
SMARCD3-202ENST00000356800 RNF222A6NCQ9 220 aa14.7□□□□□ -0.06
SMARCD3-202ENST00000356800 B4DSR2 109 aa14.7□□□□□ -0.06
SMARCD3-202ENST00000356800 K7EPK0 472 aa14.7□□□□□ -0.06
SMARCD3-202ENST00000356800 ST8SIA3O43173 380 aa14.7□□□□□ -0.06
SMARCD3-202ENST00000356800 HPRT1P00492 218 aa14.7□□□□□ -0.06
SMARCD3-202ENST00000356800 P0C879 139 aa14.7□□□□□ -0.06
SMARCD3-202ENST00000356800 IL3RAP26951 378 aa14.7□□□□□ -0.06
SMARCD3-202ENST00000356800 S100A11P31949 105 aa14.7□□□□□ -0.06
SMARCD3-202ENST00000356800 ID3Q02535 119 aa14.7□□□□□ -0.06
SMARCD3-202ENST00000356800 FAM71E2Q8N5Q1 922 aa14.7□□□□□ -0.06
SMARCD3-202ENST00000356800 INO80EQ8NBZ0 244 aaPredicted RBP14.7□□□□□ -0.06
SMARCD3-202ENST00000356800 OR1S1Q8NH92 325 aa14.7□□□□□ -0.06
SMARCD3-202ENST00000356800 RNASE11Q8TAA1 199 aaKnown RBP14.7□□□□□ -0.06
SMARCD3-202ENST00000356800 NABP2Q9BQ15 211 aa14.7□□□□□ -0.06
SMARCD3-202ENST00000356800 COA4Q9NYJ1 87 aa14.7□□□□□ -0.06
SMARCD3-202ENST00000356800 A0A1W2PRD5 423 aa14.69□□□□□ -0.06
SMARCD3-202ENST00000356800 A0A1W2PRF3 423 aa14.69□□□□□ -0.06
SMARCD3-202ENST00000356800 A0A1W2PRM7 423 aa14.69□□□□□ -0.06
SMARCD3-202ENST00000356800 NKX2-1P43699 371 aaPredicted RBP14.69□□□□□ -0.06
SMARCD3-202ENST00000356800 IZUMO4Q1ZYL8 232 aa14.69□□□□□ -0.06
SMARCD3-202ENST00000356800 Q6ZRM9 215 aa14.69□□□□□ -0.06
SMARCD3-202ENST00000356800 TMUB2Q71RG4 321 aa14.69□□□□□ -0.06
SMARCD3-202ENST00000356800 KCNRGQ8N5I3 272 aa14.69□□□□□ -0.06
SMARCD3-202ENST00000356800 AMMECR1Q9Y4X0 333 aaPredicted RBP14.69□□□□□ -0.06
SMARCD3-202ENST00000356800 H0YJW9 148 aa14.68□□□□□ -0.06
SMARCD3-202ENST00000356800 RGS13O14921 159 aa14.68□□□□□ -0.06
SMARCD3-202ENST00000356800 SCGB1D2O95969 90 aa14.68□□□□□ -0.06
SMARCD3-202ENST00000356800 KRASP01116 189 aa14.68□□□□□ -0.06
SMARCD3-202ENST00000356800 OPCMLQ14982 345 aa14.68□□□□□ -0.06
SMARCD3-202ENST00000356800 TGIF2LXQ8IUE1 241 aa14.68□□□□□ -0.06
SMARCD3-202ENST00000356800 OR5AN1Q8NGI8 311 aa14.68□□□□□ -0.06
SMARCD3-202ENST00000356800 OR4S2Q8NH73 311 aa14.68□□□□□ -0.06
SMARCD3-202ENST00000356800 LHX4Q969G2 390 aa14.68□□□□□ -0.06
SMARCD3-202ENST00000356800 LSM5Q9Y4Y9 91 aaKnown RBP14.68□□□□□ -0.06
SMARCD3-202ENST00000356800 ZANQ9Y493 2812 aa14.68□□□□□ -0.06
SMARCD3-202ENST00000356800 E5RGE8 158 aa14.68□□□□□ -0.06
SMARCD3-202ENST00000356800 HTR1DP28221 377 aa14.68□□□□□ -0.06
SMARCD3-202ENST00000356800 G6PCP35575 357 aa14.68□□□□□ -0.06
SMARCD3-202ENST00000356800 TAGLNQ01995 201 aaKnown RBP14.68□□□□□ -0.06
SMARCD3-202ENST00000356800 LHFPL4Q7Z7J7 247 aa14.68□□□□□ -0.06
SMARCD3-202ENST00000356800 FOXRED2Q8IWF2 684 aa14.68□□□□□ -0.06
SMARCD3-202ENST00000356800 LINC01356Q8N9X3 169 aa14.68□□□□□ -0.06
SMARCD3-202ENST00000356800 WFDC11Q8NEX6 87 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms