RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 SSMEM1Q8WWF3 244 aa8.49□□□□□ -1.05
PTPRA-203ENST00000356147 HSPB9Q9BQS6 159 aa8.49□□□□□ -1.05
PTPRA-203ENST00000356147 TMEM208Q9BTX3 173 aa8.49□□□□□ -1.05
PTPRA-203ENST00000356147 UBE2ZQ9H832 354 aaPredicted RBP8.49□□□□□ -1.05
PTPRA-203ENST00000356147 HSPB7Q9UBY9 170 aa8.49□□□□□ -1.05
PTPRA-203ENST00000356147 RNF114Q9Y508 228 aa8.49□□□□□ -1.05
PTPRA-203ENST00000356147 A0A1W2PPV4 95 aa8.49□□□□□ -1.05
PTPRA-203ENST00000356147 LRP5LA4QPB2 252 aa8.49□□□□□ -1.05
PTPRA-203ENST00000356147 AQP7O14520 342 aa8.49□□□□□ -1.05
PTPRA-203ENST00000356147 DNPH1O43598 174 aa8.49□□□□□ -1.05
PTPRA-203ENST00000356147 CCKARP32238 428 aa8.49□□□□□ -1.05
PTPRA-203ENST00000356147 SSTR5P35346 364 aa8.49□□□□□ -1.05
PTPRA-203ENST00000356147 GFRA1P56159 465 aa8.49□□□□□ -1.05
PTPRA-203ENST00000356147 ZNF497Q6ZNH5 498 aa8.49□□□□□ -1.05
PTPRA-203ENST00000356147 PPP1R32Q7Z5V6 425 aa8.49□□□□□ -1.05
PTPRA-203ENST00000356147 DIRC2Q96SL1 478 aa8.49□□□□□ -1.05
PTPRA-203ENST00000356147 DUSP23Q9BVJ7 150 aa8.49□□□□□ -1.05
PTPRA-203ENST00000356147 OR2J1Q9GZK6 312 aa8.49□□□□□ -1.05
PTPRA-203ENST00000356147 TP53TG3Q9ULZ0 132 aa8.49□□□□□ -1.05
PTPRA-203ENST00000356147 LINC00473A8K010 186 aa8.49□□□□□ -1.05
PTPRA-203ENST00000356147 C12orf77C9JDV5 145 aa8.49□□□□□ -1.05
PTPRA-203ENST00000356147 SERF1AO75920 110 aa8.49□□□□□ -1.05
PTPRA-203ENST00000356147 SYNGR4O95473 234 aa8.49□□□□□ -1.05
PTPRA-203ENST00000356147 ARL14EPLP0DKL9 152 aa8.49□□□□□ -1.05
PTPRA-203ENST00000356147 BTF3P20290 206 aaKnown RBP8.49□□□□□ -1.05
PTPRA-203ENST00000356147 SRP14P37108 136 aaKnown RBP8.49□□□□□ -1.05
PTPRA-203ENST00000356147 KIAA1644Q3SXP7 199 aa8.49□□□□□ -1.05
PTPRA-203ENST00000356147 PRR31Q5SQ13 230 aa8.49□□□□□ -1.05
PTPRA-203ENST00000356147 LYSMD4Q5XG99 296 aa8.49□□□□□ -1.05
PTPRA-203ENST00000356147 MIC13Q5XKP0 118 aa8.49□□□□□ -1.05
PTPRA-203ENST00000356147 LINC00696Q6ZRV3 163 aa8.49□□□□□ -1.05
PTPRA-203ENST00000356147 H2BFWTQ7Z2G1 175 aa8.49□□□□□ -1.05
PTPRA-203ENST00000356147 QTRT1Q9BXR0 403 aaKnown RBP8.49□□□□□ -1.05
PTPRA-203ENST00000356147 FZR1Q9UM11 496 aa8.49□□□□□ -1.05
PTPRA-203ENST00000356147 PXMP4Q9Y6I8 212 aa8.49□□□□□ -1.05
PTPRA-203ENST00000356147 RP1L1Q8IWN7 2480 aaPredicted RBP8.49□□□□□ -1.05
PTPRA-203ENST00000356147 SMG1Q96Q15 3661 aaKnown RBP8.48□□□□□ -1.05
PTPRA-203ENST00000356147 F6UZH7 168 aa8.48□□□□□ -1.05
PTPRA-203ENST00000356147 RRHO14718 337 aa8.48□□□□□ -1.05
PTPRA-203ENST00000356147 MBP02144 154 aa8.48□□□□□ -1.05
PTPRA-203ENST00000356147 WNT2P09544 360 aa8.48□□□□□ -1.05
PTPRA-203ENST00000356147 KITLGP21583 273 aa8.48□□□□□ -1.05
PTPRA-203ENST00000356147 GABRA2P47869 451 aa8.48□□□□□ -1.05
PTPRA-203ENST00000356147 CXCL12P48061 93 aa8.48□□□□□ -1.05
PTPRA-203ENST00000356147 OCC1Q8TAD7 63 aa8.48□□□□□ -1.05
PTPRA-203ENST00000356147 APH1AQ96BI3 265 aa8.48□□□□□ -1.05
PTPRA-203ENST00000356147 SFRP2Q96HF1 295 aa8.48□□□□□ -1.05
PTPRA-203ENST00000356147 PHF7Q9BWX1 381 aaPredicted RBP8.48□□□□□ -1.05
PTPRA-203ENST00000356147 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.48□□□□□ -1.05
PTPRA-203ENST00000356147 ELOVL5Q9NYP7 299 aa8.48□□□□□ -1.05
PTPRA-203ENST00000356147 MDFIC2A0A1B0GVS7 189 aa8.48□□□□□ -1.05
PTPRA-203ENST00000356147 RAC2P15153 192 aa8.48□□□□□ -1.05
PTPRA-203ENST00000356147 RAB4AP20338 218 aa8.48□□□□□ -1.05
PTPRA-203ENST00000356147 LINC00310P59036 64 aa8.48□□□□□ -1.05
PTPRA-203ENST00000356147 ZNF90Q03938 601 aa8.48□□□□□ -1.05
PTPRA-203ENST00000356147 OR5I1Q13606 314 aa8.48□□□□□ -1.05
PTPRA-203ENST00000356147 MDP1Q86V88 176 aa8.48□□□□□ -1.05
PTPRA-203ENST00000356147 ZCCHC14Q8WYQ9 949 aaKnown RBP8.48□□□□□ -1.05
PTPRA-203ENST00000356147 RYDENQ9NUL5 291 aaKnown RBP8.48□□□□□ -1.05
PTPRA-203ENST00000356147 SPENQ96T58 3664 aaKnown RBP8.47□□□□□ -1.05
PTPRA-203ENST00000356147 MLNRO43193 412 aa8.47□□□□□ -1.05
PTPRA-203ENST00000356147 OR10J1P30954 320 aa8.47□□□□□ -1.05
PTPRA-203ENST00000356147 LHX2P50458 406 aa8.47□□□□□ -1.05
PTPRA-203ENST00000356147 TNFSF10P50591 281 aa8.47□□□□□ -1.05
PTPRA-203ENST00000356147 IL11RAQ14626 422 aa8.47□□□□□ -1.05
PTPRA-203ENST00000356147 MSMO1Q15800 293 aa8.47□□□□□ -1.05
PTPRA-203ENST00000356147 SPATA31B1PQ5VZV4 182 aa8.47□□□□□ -1.05
PTPRA-203ENST00000356147 Q6ZR03 302 aa8.47□□□□□ -1.05
PTPRA-203ENST00000356147 METRNQ9UJH8 293 aa8.47□□□□□ -1.05
PTPRA-203ENST00000356147 PSG11Q9UQ72 335 aa8.47□□□□□ -1.05
PTPRA-203ENST00000356147 ARFGEF3Q5TH69 2177 aa8.47□□□□□ -1.05
PTPRA-203ENST00000356147 CADP27708 2225 aa8.47□□□□□ -1.05
PTPRA-203ENST00000356147 J3QT63 122 aa8.47□□□□□ -1.05
PTPRA-203ENST00000356147 K7ESF4 209 aa8.47□□□□□ -1.05
PTPRA-203ENST00000356147 CLDN14O95500 239 aa8.47□□□□□ -1.05
PTPRA-203ENST00000356147 HBZP02008 142 aa8.47□□□□□ -1.05
PTPRA-203ENST00000356147 TYMSP04818 313 aa8.47□□□□□ -1.05
PTPRA-203ENST00000356147 IER3P46695 156 aa8.47□□□□□ -1.05
PTPRA-203ENST00000356147 SOX8P57073 446 aa8.47□□□□□ -1.05
PTPRA-203ENST00000356147 TMEM144Q7Z5S9 345 aa8.47□□□□□ -1.05
PTPRA-203ENST00000356147 BAGE3Q86Y29 109 aa8.47□□□□□ -1.05
PTPRA-203ENST00000356147 BAGE2Q86Y30 109 aa8.47□□□□□ -1.05
PTPRA-203ENST00000356147 ABHD12Q8N2K0 398 aa8.47□□□□□ -1.05
PTPRA-203ENST00000356147 SAMD10Q9BYL1 202 aa8.47□□□□□ -1.05
PTPRA-203ENST00000356147 PCED1AQ9H1Q7 454 aa8.47□□□□□ -1.05
PTPRA-203ENST00000356147 TIMM9Q9Y5J7 89 aa8.47□□□□□ -1.05
PTPRA-203ENST00000356147 TRBV6-6A0A0A6YYG2 114 aa8.47□□□□□ -1.05
PTPRA-203ENST00000356147 KIR2DL5BA0A0G2JN68 375 aa8.47□□□□□ -1.05
PTPRA-203ENST00000356147 KIR2DL5BA0A0G2JPC4 375 aa8.47□□□□□ -1.05
PTPRA-203ENST00000356147 OR5B21A6NL26 309 aa8.47□□□□□ -1.05
PTPRA-203ENST00000356147 IGHEP01854 428 aa8.47□□□□□ -1.05
PTPRA-203ENST00000356147 OR9G9P0C7N8 305 aa8.47□□□□□ -1.05
PTPRA-203ENST00000356147 KRTDAPP60985 99 aa8.47□□□□□ -1.05
PTPRA-203ENST00000356147 EDDM3AQ14507 147 aa8.47□□□□□ -1.05
PTPRA-203ENST00000356147 ACSF3Q4G176 576 aaPredicted RBP8.47□□□□□ -1.05
PTPRA-203ENST00000356147 KRTCAP3Q53RY4 240 aa8.47□□□□□ -1.05
PTPRA-203ENST00000356147 KIR2DL5AQ8N109 375 aa8.47□□□□□ -1.05
PTPRA-203ENST00000356147 SPEM1Q8N4L4 309 aa8.47□□□□□ -1.05
PTPRA-203ENST00000356147 Q8N7P7 452 aa8.47□□□□□ -1.05
PTPRA-203ENST00000356147 GALMQ96C23 342 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms