RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 SLC17A3O00476 420 aa12.03□□□□□ -0.48
SREBF1-202ENST00000355815 KLF7O75840 302 aaPredicted RBP12.03□□□□□ -0.48
SREBF1-202ENST00000355815 ZNF766Q5HY98 468 aa12.03□□□□□ -0.48
SREBF1-202ENST00000355815 TCF23Q7RTU1 214 aa12.03□□□□□ -0.48
SREBF1-202ENST00000355815 GTF3AQ92664 365 aaKnown RBP12.03□□□□□ -0.48
SREBF1-202ENST00000355815 LOC390937A0A1W2PQ73 354 aa12.03□□□□□ -0.48
SREBF1-202ENST00000355815 B4E171 279 aa12.03□□□□□ -0.48
SREBF1-202ENST00000355815 FGF16O43320 207 aa12.03□□□□□ -0.48
SREBF1-202ENST00000355815 RHBDL1O75783 438 aa12.03□□□□□ -0.48
SREBF1-202ENST00000355815 APCSP02743 223 aa12.03□□□□□ -0.48
SREBF1-202ENST00000355815 OR4B1Q8NGF8 309 aa12.03□□□□□ -0.48
SREBF1-202ENST00000355815 GALNT14Q96FL9 552 aa12.03□□□□□ -0.48
SREBF1-202ENST00000355815 RCC1LQ96I51 464 aaKnown RBP12.03□□□□□ -0.48
SREBF1-202ENST00000355815 OR2J1Q9GZK6 312 aa12.03□□□□□ -0.48
SREBF1-202ENST00000355815 WNT5BQ9H1J7 359 aa12.03□□□□□ -0.48
SREBF1-202ENST00000355815 TMSB15BA0A087X1C1 80 aa12.03□□□□□ -0.48
SREBF1-202ENST00000355815 CLEC3BP05452 202 aa12.03□□□□□ -0.48
SREBF1-202ENST00000355815 APELAP0DMC3 54 aa12.03□□□□□ -0.48
SREBF1-202ENST00000355815 F2RP25116 425 aa12.03□□□□□ -0.48
SREBF1-202ENST00000355815 CEBPDP49716 269 aaPredicted RBP12.03□□□□□ -0.48
SREBF1-202ENST00000355815 PLP1P60201 277 aa12.03□□□□□ -0.48
SREBF1-202ENST00000355815 ERVFRD-1P60508 538 aa12.03□□□□□ -0.48
SREBF1-202ENST00000355815 HES1Q14469 280 aa12.03□□□□□ -0.48
SREBF1-202ENST00000355815 BPIFA4PQ86YQ2 179 aa12.03□□□□□ -0.48
SREBF1-202ENST00000355815 IMMP1LQ96LU5 166 aa12.03□□□□□ -0.48
SREBF1-202ENST00000355815 TMEM222Q9H0R3 208 aa12.03□□□□□ -0.48
SREBF1-202ENST00000355815 RAB9BQ9NP90 201 aa12.03□□□□□ -0.48
SREBF1-202ENST00000355815 SPG11Q96JI7 2443 aa12.03□□□□□ -0.48
SREBF1-202ENST00000355815 IGLV3-12A0A075B6K2 115 aa12.03□□□□□ -0.48
SREBF1-202ENST00000355815 PRSS1P07477 247 aa12.03□□□□□ -0.48
SREBF1-202ENST00000355815 NMUP48645 174 aa12.03□□□□□ -0.48
SREBF1-202ENST00000355815 PAFAH1B2P68402 229 aa12.03□□□□□ -0.48
SREBF1-202ENST00000355815 HEPN1Q6WQI6 88 aa12.03□□□□□ -0.48
SREBF1-202ENST00000355815 TAF15Q92804 592 aaKnown RBP eCLIP12.03□□□□□ -0.485e-9■■■■□ 25.5
SREBF1-202ENST00000355815 SF3B5Q9BWJ5 86 aaKnown RBP12.03□□□□□ -0.48
SREBF1-202ENST00000355815 DEPPQ9NTK1 212 aa12.03□□□□□ -0.48
SREBF1-202ENST00000355815 MED13Q9UHV7 2174 aa12.02□□□□□ -0.48
SREBF1-202ENST00000355815 ERHP84090 104 aaKnown RBP12.02□□□□□ -0.48
SREBF1-202ENST00000355815 ZNF826PQ6ZT77 177 aa12.02□□□□□ -0.48
SREBF1-202ENST00000355815 GPR146Q96CH1 333 aa12.02□□□□□ -0.48
SREBF1-202ENST00000355815 FLYWCH2Q96CP2 140 aaKnown RBP12.02□□□□□ -0.48
SREBF1-202ENST00000355815 TAAR6Q96RI8 345 aa12.02□□□□□ -0.48
SREBF1-202ENST00000355815 RTBDNQ9BSG5 229 aaPredicted RBP12.02□□□□□ -0.48
SREBF1-202ENST00000355815 SSBP3Q9BWW4 388 aaPredicted RBP12.02□□□□□ -0.48
SREBF1-202ENST00000355815 TTTY12Q9BZ98 90 aa12.02□□□□□ -0.48
SREBF1-202ENST00000355815 HES4Q9HCC6 221 aa12.02□□□□□ -0.48
SREBF1-202ENST00000355815 YTHDF2Q9Y5A9 579 aaKnown RBP12.02□□□□□ -0.48
SREBF1-202ENST00000355815 USF3Q68DE3 2245 aa12.02□□□□□ -0.49
SREBF1-202ENST00000355815 K7EQM0 130 aa12.02□□□□□ -0.49
SREBF1-202ENST00000355815 HIST3H2BBQ8N257 126 aa12.02□□□□□ -0.49
SREBF1-202ENST00000355815 OPRK1P41145 380 aa12.02□□□□□ -0.49
SREBF1-202ENST00000355815 FAM162BQ5T6X4 162 aa12.02□□□□□ -0.49
SREBF1-202ENST00000355815 CISD2Q8N5K1 135 aaKnown RBP12.02□□□□□ -0.49
SREBF1-202ENST00000355815 EDARADDQ8WWZ3 215 aa12.02□□□□□ -0.49
SREBF1-202ENST00000355815 BOD1Q96IK1 185 aa12.02□□□□□ -0.49
SREBF1-202ENST00000355815 PGPEP1LA6NFU8 196 aa12.01□□□□□ -0.49
SREBF1-202ENST00000355815 PLAUP00749 431 aa12.01□□□□□ -0.49
SREBF1-202ENST00000355815 ANOS1P23352 680 aa12.01□□□□□ -0.49
SREBF1-202ENST00000355815 SERF2P84101 59 aa12.01□□□□□ -0.49
SREBF1-202ENST00000355815 FAM166AQ6J272 317 aa12.01□□□□□ -0.49
SREBF1-202ENST00000355815 DPF1Q92782 380 aa12.01□□□□□ -0.49
SREBF1-202ENST00000355815 RNF166Q96A37 237 aaPredicted RBP12.01□□□□□ -0.49
SREBF1-202ENST00000355815 OR2W1Q9Y3N9 320 aa12.01□□□□□ -0.49
SREBF1-202ENST00000355815 IL2RAP01589 272 aa12.01□□□□□ -0.49
SREBF1-202ENST00000355815 PTGDSP41222 190 aa12.01□□□□□ -0.49
SREBF1-202ENST00000355815 NUBP1P53384 320 aa12.01□□□□□ -0.49
SREBF1-202ENST00000355815 FOXA3P55318 350 aaPredicted RBP12.01□□□□□ -0.49
SREBF1-202ENST00000355815 MMDQ15546 238 aa12.01□□□□□ -0.49
SREBF1-202ENST00000355815 FAM216AQ8WUB2 273 aa12.01□□□□□ -0.49
SREBF1-202ENST00000355815 Q96M66 194 aa12.01□□□□□ -0.49
SREBF1-202ENST00000355815 FOXD3Q9UJU5 478 aaPredicted RBP12.01□□□□□ -0.49
SREBF1-202ENST00000355815 TMEM30CPA0ZSE6 113 aa12.01□□□□□ -0.49
SREBF1-202ENST00000355815 PINLYPA6NC86 204 aa12.01□□□□□ -0.49
SREBF1-202ENST00000355815 RBM11P57052 281 aaKnown RBP12.01□□□□□ -0.49
SREBF1-202ENST00000355815 ZNF718Q3SXZ3 478 aa12.01□□□□□ -0.49
SREBF1-202ENST00000355815 TMEM230Q96A57 120 aa12.01□□□□□ -0.49
SREBF1-202ENST00000355815 ZNF391Q9UJN7 358 aa12.01□□□□□ -0.49
SREBF1-202ENST00000355815 LOC389332A0A1B0GUA5 103 aa12□□□□□ -0.49
SREBF1-202ENST00000355815 NKX2-8O15522 239 aa12□□□□□ -0.49
SREBF1-202ENST00000355815 AMBPP02760 352 aa12□□□□□ -0.49
SREBF1-202ENST00000355815 MDP1Q86V88 176 aa12□□□□□ -0.49
SREBF1-202ENST00000355815 OR8B3Q8NGG8 313 aa12□□□□□ -0.49
SREBF1-202ENST00000355815 MUCL1Q96DR8 90 aa12□□□□□ -0.49
SREBF1-202ENST00000355815 NUDT16L1Q9BRJ7 211 aaKnown RBP12□□□□□ -0.49
SREBF1-202ENST00000355815 SH2D2AQ9NP31 389 aa12□□□□□ -0.49
SREBF1-202ENST00000355815 CFAP54Q96N23 3096 aa12□□□□□ -0.49
SREBF1-202ENST00000355815 TNFSF4P23510 183 aa12□□□□□ -0.49
SREBF1-202ENST00000355815 AESQ08117 197 aa12□□□□□ -0.49
SREBF1-202ENST00000355815 MIC13Q5XKP0 118 aa12□□□□□ -0.49
SREBF1-202ENST00000355815 ISLRO14498 428 aa12□□□□□ -0.49
SREBF1-202ENST00000355815 EREGO14944 169 aa12□□□□□ -0.49
SREBF1-202ENST00000355815 SPRY3O43610 288 aa12□□□□□ -0.49
SREBF1-202ENST00000355815 OR4A8P0C604 315 aa12□□□□□ -0.49
SREBF1-202ENST00000355815 ZNF83P51522 516 aa12□□□□□ -0.49
SREBF1-202ENST00000355815 TMEM187Q14656 261 aa12□□□□□ -0.49
SREBF1-202ENST00000355815 JOSD1Q15040 202 aaPredicted RBP12□□□□□ -0.49
SREBF1-202ENST00000355815 Q1RN00 199 aa12□□□□□ -0.49
SREBF1-202ENST00000355815 CPEB3Q8NE35 698 aaKnown RBP12□□□□□ -0.49
SREBF1-202ENST00000355815 OR2Z1Q8NG97 314 aa12□□□□□ -0.49
SREBF1-202ENST00000355815 OR51G1Q8NGK1 321 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms