RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 A1L4Q6 167 aa12.79□□□□□ -0.36
LMX1B-201ENST00000355497 ZG16O60844 167 aa12.79□□□□□ -0.36
LMX1B-201ENST00000355497 ISG15P05161 165 aa12.79□□□□□ -0.36
LMX1B-201ENST00000355497 EEF1AKMT3Q96AZ1 226 aa12.79□□□□□ -0.36
LMX1B-201ENST00000355497 TLNRD1Q9H1K6 362 aa12.79□□□□□ -0.36
LMX1B-201ENST00000355497 URB1O60287 2271 aaKnown RBP12.79□□□□□ -0.36
LMX1B-201ENST00000355497 JKAMPQ9P055 326 aa12.79□□□□□ -0.36
LMX1B-201ENST00000355497 A0A1W2PP11 408 aa12.79□□□□□ -0.36
LMX1B-201ENST00000355497 ATOH7Q8N100 152 aa12.79□□□□□ -0.36
LMX1B-201ENST00000355497 SH3BGRL3Q9H299 93 aa12.79□□□□□ -0.36
LMX1B-201ENST00000355497 TRBV20OR9-2A0A075B6H5 130 aa12.79□□□□□ -0.36
LMX1B-201ENST00000355497 PRR33A8MZF0 331 aa12.79□□□□□ -0.36
LMX1B-201ENST00000355497 TSPAN7P41732 249 aa12.79□□□□□ -0.36
LMX1B-201ENST00000355497 SLC25A47Q6Q0C1 308 aa12.79□□□□□ -0.36
LMX1B-201ENST00000355497 KIAA1644Q3SXP7 199 aa12.78□□□□□ -0.36
LMX1B-201ENST00000355497 C10orf128Q5T292 105 aa12.78□□□□□ -0.36
LMX1B-201ENST00000355497 BIVMQ86UB2 503 aa12.78□□□□□ -0.36
LMX1B-201ENST00000355497 JPT1Q9UK76 154 aa12.78□□□□□ -0.36
LMX1B-201ENST00000355497 SDK1Q7Z5N4 2213 aa12.78□□□□□ -0.36
LMX1B-201ENST00000355497 SLX4Q8IY92 1834 aa12.78□□□□□ -0.36
LMX1B-201ENST00000355497 ODAMA1E959 279 aa12.78□□□□□ -0.36
LMX1B-201ENST00000355497 REG1AP05451 166 aa12.78□□□□□ -0.36
LMX1B-201ENST00000355497 PRELID3AQ96N28 172 aa12.78□□□□□ -0.36
LMX1B-201ENST00000355497 DLL3Q9NYJ7 618 aa12.78□□□□□ -0.36
LMX1B-201ENST00000355497 DMRT1Q9Y5R6 373 aa12.78□□□□□ -0.36
LMX1B-201ENST00000355497 MYO5AQ9Y4I1 1855 aaKnown RBP12.78□□□□□ -0.36
LMX1B-201ENST00000355497 MARCH11A6NNE9 402 aa12.78□□□□□ -0.36
LMX1B-201ENST00000355497 SNRPD3P62318 126 aaKnown RBP12.78□□□□□ -0.36
LMX1B-201ENST00000355497 TMEM101Q96IK0 257 aa12.78□□□□□ -0.36
LMX1B-201ENST00000355497 SFXN3Q9BWM7 321 aa12.78□□□□□ -0.36
LMX1B-201ENST00000355497 EVPLQ92817 2033 aa12.78□□□□□ -0.36
LMX1B-201ENST00000355497 BTAF1O14981 1849 aa12.78□□□□□ -0.36
LMX1B-201ENST00000355497 PEF1Q9UBV8 284 aaKnown RBP12.78□□□□□ -0.36
LMX1B-201ENST00000355497 PPIAL4CA0A0B4J2A2 164 aa12.77□□□□□ -0.36
LMX1B-201ENST00000355497 A0A1W2PQM1 296 aa12.77□□□□□ -0.36
LMX1B-201ENST00000355497 AHRRA9YTQ3 701 aa12.77□□□□□ -0.36
LMX1B-201ENST00000355497 EIF3GO75821 320 aaKnown RBP eCLIP12.77□□□□□ -0.36
LMX1B-201ENST00000355497 RECKO95980 971 aa12.77□□□□□ -0.36
LMX1B-201ENST00000355497 PPIAL4GP0DN37 164 aa12.77□□□□□ -0.36
LMX1B-201ENST00000355497 LIMS1P48059 325 aa12.77□□□□□ -0.36
LMX1B-201ENST00000355497 GLIPR1P48060 266 aa12.77□□□□□ -0.36
LMX1B-201ENST00000355497 HBBP68871 147 aa12.77□□□□□ -0.36
LMX1B-201ENST00000355497 TFF2Q03403 129 aa12.77□□□□□ -0.36
LMX1B-201ENST00000355497 TMEM95Q3KNT9 176 aa12.77□□□□□ -0.36
LMX1B-201ENST00000355497 GRIFINA4D1Z8 144 aa12.77□□□□□ -0.36
LMX1B-201ENST00000355497 NPPCP23582 126 aa12.77□□□□□ -0.36
LMX1B-201ENST00000355497 FAM159AQ6UWV7 190 aa12.77□□□□□ -0.36
LMX1B-201ENST00000355497 SAXO1Q8IYX7 474 aa12.77□□□□□ -0.36
LMX1B-201ENST00000355497 SMIM8Q96KF7 97 aa12.77□□□□□ -0.36
LMX1B-201ENST00000355497 PLSCR2Q9NRY7 297 aa12.77□□□□□ -0.36
LMX1B-201ENST00000355497 TMEM160Q9NX00 188 aa12.77□□□□□ -0.36
LMX1B-201ENST00000355497 OR11H12B2RN74 326 aa12.77□□□□□ -0.37
LMX1B-201ENST00000355497 PATE3B3GLJ2 98 aa12.77□□□□□ -0.37
LMX1B-201ENST00000355497 ZNF146Q15072 292 aa12.77□□□□□ -0.37
LMX1B-201ENST00000355497 ABHD12Q8N2K0 398 aa12.77□□□□□ -0.37
LMX1B-201ENST00000355497 OR11H1Q8NG94 326 aa12.77□□□□□ -0.37
LMX1B-201ENST00000355497 OR11H2Q8NH07 326 aa12.77□□□□□ -0.37
LMX1B-201ENST00000355497 KCNK17Q96T54 332 aa12.77□□□□□ -0.37
LMX1B-201ENST00000355497 A0A1B0GV90 55 aa12.77□□□□□ -0.37
LMX1B-201ENST00000355497 H3BTX0 84 aa12.77□□□□□ -0.37
LMX1B-201ENST00000355497 ZNHIT1O43257 154 aa12.77□□□□□ -0.37
LMX1B-201ENST00000355497 LCN2P80188 198 aa12.77□□□□□ -0.37
LMX1B-201ENST00000355497 GOLT1AQ6ZVE7 132 aa12.77□□□□□ -0.37
LMX1B-201ENST00000355497 MOSPD3O75425 235 aa12.77□□□□□ -0.37
LMX1B-201ENST00000355497 C1orf100Q5SVJ3 147 aa12.77□□□□□ -0.37
LMX1B-201ENST00000355497 ZNF501Q96CX3 271 aaPredicted RBP12.77□□□□□ -0.37
LMX1B-201ENST00000355497 CHODLQ9H9P2 273 aa12.77□□□□□ -0.37
LMX1B-201ENST00000355497 DMRTA2Q96SC8 542 aa12.76□□□□□ -0.37
LMX1B-201ENST00000355497 DANCRP0C864 163 aa12.76□□□□□ -0.37
LMX1B-201ENST00000355497 IFITM3Q01628 133 aa12.76□□□□□ -0.37
LMX1B-201ENST00000355497 LY6EQ16553 131 aa12.76□□□□□ -0.37
LMX1B-201ENST00000355497 WNT2BQ93097 391 aa12.76□□□□□ -0.37
LMX1B-201ENST00000355497 NPIPB11E5RHQ5 1161 aa12.76□□□□□ -0.37
LMX1B-201ENST00000355497 ZNF414Q96IQ9 312 aa12.76□□□□□ -0.37
LMX1B-201ENST00000355497 WFIKKN1Q96NZ8 548 aa12.76□□□□□ -0.37
LMX1B-201ENST00000355497 NABP2Q9BQ15 211 aa12.76□□□□□ -0.37
LMX1B-201ENST00000355497 GON4LQ3T8J9 2241 aa12.76□□□□□ -0.37
LMX1B-201ENST00000355497 TMEM30BQ3MIR4 351 aa12.76□□□□□ -0.37
LMX1B-201ENST00000355497 ZNF324BQ6AW86 544 aaPredicted RBP12.76□□□□□ -0.37
LMX1B-201ENST00000355497 TBL2Q9Y4P3 447 aaKnown RBP12.76□□□□□ -0.37
LMX1B-201ENST00000355497 SNAI3Q3KNW1 292 aa12.75□□□□□ -0.37
LMX1B-201ENST00000355497 TMEM170BQ5T4T1 132 aa12.75□□□□□ -0.37
LMX1B-201ENST00000355497 TMEM186Q96B77 213 aa12.75□□□□□ -0.37
LMX1B-201ENST00000355497 FOXI3A8MTJ6 420 aaPredicted RBP12.75□□□□□ -0.37
LMX1B-201ENST00000355497 OR9G1Q8NH87 305 aa12.75□□□□□ -0.37
LMX1B-201ENST00000355497 TRBV5-7A0A0A0MS05 114 aa12.75□□□□□ -0.37
LMX1B-201ENST00000355497 PSMB11A5LHX3 300 aa12.75□□□□□ -0.37
LMX1B-201ENST00000355497 GCHFRP30047 84 aa12.75□□□□□ -0.37
LMX1B-201ENST00000355497 LIPFP07098 398 aa12.75□□□□□ -0.37
LMX1B-201ENST00000355497 CELA2AP08217 269 aa12.75□□□□□ -0.37
LMX1B-201ENST00000355497 SAPCD1Q5SSQ6 148 aa12.75□□□□□ -0.37
LMX1B-201ENST00000355497 AMELYQ99218 206 aa12.75□□□□□ -0.37
LMX1B-201ENST00000355497 TCF19Q9Y242 345 aa12.75□□□□□ -0.37
LMX1B-201ENST00000355497 PAPPA2Q9BXP8 1791 aa12.75□□□□□ -0.37
LMX1B-201ENST00000355497 DOCK2Q92608 1830 aa12.75□□□□□ -0.37
LMX1B-201ENST00000355497 OR5A1Q8NGJ0 315 aa12.75□□□□□ -0.37
LMX1B-201ENST00000355497 IGLV1-36A0A0B4J1U3 117 aa12.74□□□□□ -0.37
LMX1B-201ENST00000355497 ZNF729A6NN14 1252 aaPredicted RBP12.74□□□□□ -0.37
LMX1B-201ENST00000355497 TMEM187Q14656 261 aa12.74□□□□□ -0.37
LMX1B-201ENST00000355497 CENPWQ5EE01 88 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms