RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 FAM131AQ6UXB0 335 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 C4orf22Q6V702 233 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 C3orf62Q6ZUJ4 267 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 FAM183BPQ6ZVS7 135 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 SMIM5Q71RC9 77 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 WDR86Q86TI4 376 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 COMMD7Q86VX2 200 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 DHFR2Q86XF0 187 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 SLC13A5Q86YT5 568 aaPredicted RBP1.06□□□□□ -2.24
BRCA1-202ENST00000354071 TMEM75Q8N9X5 138 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 UBAC2Q8NBM4 344 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 LINC00301Q8NCQ3 95 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 BPIFB6Q8NFQ5 453 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 SPPL2BQ8TCT7 592 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 C1orf54Q8WWF1 131 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 TESCQ96BS2 214 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 OR2A7Q96R45 310 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 CHST5Q9GZS9 411 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 OR51I1Q9H343 314 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 BIN3Q9NQY0 253 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 FAM49BQ9NUQ9 324 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 ENOPH1Q9UHY7 261 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 GNG8Q9UK08 70 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 RPL26L1Q9UNX3 145 aaKnown RBP1.06□□□□□ -2.24
BRCA1-202ENST00000354071 HEY1Q9Y5J3 304 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 INSIG2Q9Y5U4 225 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 ABCC12Q96J65 1359 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 IGLV11-55A0A075B6I3 123 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 OR6C70A6NIJ9 312 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 TSTD3H0UI37 97 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 SLC31A1O15431 190 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 ORC5O43913 435 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 UPK1BO75841 260 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 SNAPC5O75971 98 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 HLA-DRAP01903 254 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 PRH1P02810 166 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 CTXN2P0C2S0 81 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 OR56A5P0C7T3 313 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 CGB3P0DN86 165 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 CGB7P0DN87 165 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 SLC2A1P11166 492 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 PYCR1P32322 319 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 FAUP35544 74 aaKnown RBP1.06□□□□□ -2.24
BRCA1-202ENST00000354071 KRTAP10-7P60409 375 aaPredicted RBP1.06□□□□□ -2.24
BRCA1-202ENST00000354071 TFAMQ00059 246 aaKnown RBP1.06□□□□□ -2.24
BRCA1-202ENST00000354071 LOXL1Q08397 574 aaPredicted RBP1.06□□□□□ -2.24
BRCA1-202ENST00000354071 BIKQ13323 160 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 NAB1Q13506 487 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 FAM53BQ14153 422 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 DEFB116Q30KQ4 102 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 TEX30Q5JUR7 227 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 ZNF684Q5T5D7 378 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 OGFRL1Q5TC84 451 aaPredicted RBP1.06□□□□□ -2.24
BRCA1-202ENST00000354071 EIF5AL1Q6IS14 154 aaKnown RBP1.06□□□□□ -2.24
BRCA1-202ENST00000354071 DPPA2Q7Z7J5 298 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 ZNF101Q8IZC7 436 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 STK40Q8N2I9 435 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 Q8N402 240 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 COQ8AQ8NI60 647 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 STOML3Q8TAV4 291 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 TWIST2Q8WVJ9 160 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 PYDC1Q8WXC3 89 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 KLK6Q92876 244 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 KLF6Q99612 283 aaPredicted RBP1.06□□□□□ -2.24
BRCA1-202ENST00000354071 PRSS27Q9BQR3 290 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 VPS25Q9BRG1 176 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 TCEAL7Q9BRU2 100 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 LINC00574Q9H8X3 128 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 GINS2Q9Y248 185 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 CCDC141Q6ZP82 1450 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 E9PCH4 1651 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 PPLO60437 1756 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 NUP205Q92621 2012 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 IGHV1OR15-9A0A0B4J2B8 117 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 KANTRA0A1W2PQU2 76 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 C1orf196B1AJZ1 125 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 DISC1C4P0D8 188 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 C4orf51C9J302 202 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 K7EQS6 105 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 UPK1AO00322 258 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 MFNGO00587 321 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 COX7A2P2O60397 106 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 CNMDO75829 334 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 WISP3O95389 354 aaPredicted RBP1.05□□□□□ -2.24
BRCA1-202ENST00000354071 CNIH1O95406 144 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 ZNF682O95780 498 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 IFNA10P01566 189 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 APOC3P02656 99 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 IFNA4P05014 189 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 CDK1P06493 297 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 COX4I1P13073 169 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 RPL12P30050 165 aaKnown RBP1.05□□□□□ -2.24
BRCA1-202ENST00000354071 GUCA1AP43080 201 aaPredicted RBP1.05□□□□□ -2.24
BRCA1-202ENST00000354071 TTPAP49638 278 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 AP3S2P59780 193 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 KRTAP10-5P60370 271 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 PFN3P60673 137 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 SPCS2Q15005 226 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 RSU1Q15404 277 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 ATP6AP1LQ52LC2 224 aa1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms