RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 FAM209AQ5JX71 171 aa11.58□□□□□ -0.55
SMC6-201ENST00000351948 PLPPR1Q8TBJ4 325 aa11.58□□□□□ -0.55
SMC6-201ENST00000351948 JPT1Q9UK76 154 aa11.58□□□□□ -0.55
SMC6-201ENST00000351948 ZNF729A6NN14 1252 aaPredicted RBP11.58□□□□□ -0.56
SMC6-201ENST00000351948 J3QRE1 110 aa11.58□□□□□ -0.56
SMC6-201ENST00000351948 LY86O95711 162 aa11.58□□□□□ -0.56
SMC6-201ENST00000351948 SELLP14151 372 aa11.58□□□□□ -0.56
SMC6-201ENST00000351948 UNQ5815/PRO19632Q6UWF5 114 aa11.58□□□□□ -0.56
SMC6-201ENST00000351948 TMEM252Q8N6L7 170 aa11.58□□□□□ -0.56
SMC6-201ENST00000351948 SHANK1Q9Y566 2161 aa11.58□□□□□ -0.56
SMC6-201ENST00000351948 IGFBP3P17936 291 aaPredicted RBP11.58□□□□□ -0.56
SMC6-201ENST00000351948 TFPI2P48307 235 aa11.58□□□□□ -0.56
SMC6-201ENST00000351948 EFNB1P98172 346 aa11.58□□□□□ -0.56
SMC6-201ENST00000351948 TEPPQ6URK8 271 aa11.58□□□□□ -0.56
SMC6-201ENST00000351948 FAM168AQ92567 244 aa11.58□□□□□ -0.56
SMC6-201ENST00000351948 RBKSQ9H477 322 aa11.58□□□□□ -0.56
SMC6-201ENST00000351948 MMP26Q9NRE1 261 aa11.58□□□□□ -0.56
SMC6-201ENST00000351948 CLCF1Q9UBD9 225 aa11.58□□□□□ -0.56
SMC6-201ENST00000351948 TIMP3P35625 211 aa11.58□□□□□ -0.56
SMC6-201ENST00000351948 Q8WTZ3 238 aa11.58□□□□□ -0.56
SMC6-201ENST00000351948 TMEM208Q9BTX3 173 aa11.58□□□□□ -0.56
SMC6-201ENST00000351948 KIAA1671Q9BY89 1806 aa11.58□□□□□ -0.56
SMC6-201ENST00000351948 KIF26AQ9ULI4 1882 aaPredicted RBP11.58□□□□□ -0.56
SMC6-201ENST00000351948 FBP1P09467 338 aa11.57□□□□□ -0.56
SMC6-201ENST00000351948 CXCL2P19875 107 aa11.57□□□□□ -0.56
SMC6-201ENST00000351948 CD24P25063 80 aa11.57□□□□□ -0.56
SMC6-201ENST00000351948 GTF3C1Q12789 2109 aa11.57□□□□□ -0.56
SMC6-201ENST00000351948 SELENOHQ8IZQ5 122 aaKnown RBP11.57□□□□□ -0.56
SMC6-201ENST00000351948 GTF3AQ92664 365 aaKnown RBP11.57□□□□□ -0.56
SMC6-201ENST00000351948 PLSCR4Q9NRQ2 329 aa11.57□□□□□ -0.56
SMC6-201ENST00000351948 IGF2RP11717 2491 aa11.57□□□□□ -0.56
SMC6-201ENST00000351948 CRYGSP22914 178 aa11.57□□□□□ -0.56
SMC6-201ENST00000351948 PAX5Q02548 391 aa11.57□□□□□ -0.56
SMC6-201ENST00000351948 SLC35E4Q6ICL7 350 aa11.57□□□□□ -0.56
SMC6-201ENST00000351948 WDR82Q6UXN9 313 aa11.57□□□□□ -0.56
SMC6-201ENST00000351948 RNF144BQ7Z419 303 aa11.57□□□□□ -0.56
SMC6-201ENST00000351948 MYPOPQ86VE0 399 aaPredicted RBP11.57□□□□□ -0.56
SMC6-201ENST00000351948 GRAMD2BQ96HH9 432 aa11.57□□□□□ -0.56
SMC6-201ENST00000351948 SSBP3Q9BWW4 388 aaPredicted RBP11.57□□□□□ -0.56
SMC6-201ENST00000351948 S4R3C0 116 aa11.57□□□□□ -0.56
SMC6-201ENST00000351948 DOCK10Q96BY6 2186 aa11.57□□□□□ -0.56
SMC6-201ENST00000351948 IFNL4K9M1U5 179 aa11.57□□□□□ -0.56
SMC6-201ENST00000351948 LILRA1O75019 489 aa11.57□□□□□ -0.56
SMC6-201ENST00000351948 LY6HO94772 140 aa11.57□□□□□ -0.56
SMC6-201ENST00000351948 TGFAP01135 160 aa11.57□□□□□ -0.56
SMC6-201ENST00000351948 PAX6P26367 422 aa11.57□□□□□ -0.56
SMC6-201ENST00000351948 CD1BP29016 333 aa11.57□□□□□ -0.56
SMC6-201ENST00000351948 PEAR1Q5VY43 1037 aaPredicted RBP11.57□□□□□ -0.56
SMC6-201ENST00000351948 PDPNQ86YL7 162 aa11.57□□□□□ -0.56
SMC6-201ENST00000351948 TNFSF18Q9UNG2 199 aa11.57□□□□□ -0.56
SMC6-201ENST00000351948 OR10J1P30954 320 aa11.57□□□□□ -0.56
SMC6-201ENST00000351948 K7ENP7 123 aa11.56□□□□□ -0.56
SMC6-201ENST00000351948 GNG4P50150 75 aa11.56□□□□□ -0.56
SMC6-201ENST00000351948 AARDQ4LEZ3 155 aa11.56□□□□□ -0.56
SMC6-201ENST00000351948 LINC00052Q96N35 136 aa11.56□□□□□ -0.56
SMC6-201ENST00000351948 NBL1P41271 181 aa11.56□□□□□ -0.56
SMC6-201ENST00000351948 LOXL3P58215 753 aa11.56□□□□□ -0.56
SMC6-201ENST00000351948 C10orf113Q5VZT2 155 aa11.56□□□□□ -0.56
SMC6-201ENST00000351948 TECRQ9NZ01 308 aaKnown RBP11.56□□□□□ -0.56
SMC6-201ENST00000351948 CEACAM18A8MTB9 384 aa11.56□□□□□ -0.56
SMC6-201ENST00000351948 PAGE4O60829 102 aa11.56□□□□□ -0.56
SMC6-201ENST00000351948 PGA5P0DJD9 388 aa11.56□□□□□ -0.56
SMC6-201ENST00000351948 C2orf16Q68DN1 1984 aa11.56□□□□□ -0.56
SMC6-201ENST00000351948 FOXH1O75593 365 aa11.56□□□□□ -0.56
SMC6-201ENST00000351948 OR5R1Q8NH85 324 aa11.56□□□□□ -0.56
SMC6-201ENST00000351948 AP1S3Q96PC3 154 aa11.56□□□□□ -0.56
SMC6-201ENST00000351948 NUDT16L1Q9BRJ7 211 aaKnown RBP11.56□□□□□ -0.56
SMC6-201ENST00000351948 PTPN13Q12923 2485 aa11.55□□□□□ -0.56
SMC6-201ENST00000351948 IGKV1-12A0A0C4DH73 117 aa11.55□□□□□ -0.56
SMC6-201ENST00000351948 G3V3Q6 166 aa11.55□□□□□ -0.56
SMC6-201ENST00000351948 PPP1R2P9O14990 202 aa11.55□□□□□ -0.56
SMC6-201ENST00000351948 IGKV1D-12P01611 117 aa11.55□□□□□ -0.56
SMC6-201ENST00000351948 GFI1Q99684 422 aa11.55□□□□□ -0.56
SMC6-201ENST00000351948 TM2D1Q9BX74 207 aa11.55□□□□□ -0.56
SMC6-201ENST00000351948 C11orf94C9JXX5 98 aa11.55□□□□□ -0.56
SMC6-201ENST00000351948 CD74P04233 296 aa11.55□□□□□ -0.56
SMC6-201ENST00000351948 WT1P19544 449 aaPredicted RBP11.55□□□□□ -0.56
SMC6-201ENST00000351948 RND2P52198 227 aa11.55□□□□□ -0.56
SMC6-201ENST00000351948 SPCS3P61009 180 aa11.55□□□□□ -0.56
SMC6-201ENST00000351948 ZNF474Q6S9Z5 364 aaPredicted RBP11.55□□□□□ -0.56
SMC6-201ENST00000351948 MMD2Q8IY49 270 aa11.55□□□□□ -0.56
SMC6-201ENST00000351948 FAM103A1Q9BTL3 118 aaKnown RBP11.55□□□□□ -0.56
SMC6-201ENST00000351948 SLC35B3Q9H1N7 401 aa11.55□□□□□ -0.56
SMC6-201ENST00000351948 PIEZO2Q9H5I5 2752 aa11.55□□□□□ -0.56
SMC6-201ENST00000351948 RBFOX3A6NFN3 312 aa11.55□□□□□ -0.56
SMC6-201ENST00000351948 OR2A4O95047 310 aa11.55□□□□□ -0.56
SMC6-201ENST00000351948 IGHV1-46P01743 117 aa11.55□□□□□ -0.56
SMC6-201ENST00000351948 TCL1AP56279 114 aa11.55□□□□□ -0.56
SMC6-201ENST00000351948 RANP62826 216 aaKnown RBP11.55□□□□□ -0.56
SMC6-201ENST00000351948 C1QTNF12Q5T7M4 302 aa11.55□□□□□ -0.56
SMC6-201ENST00000351948 OR2A7Q96R45 310 aa11.55□□□□□ -0.56
SMC6-201ENST00000351948 NEUROG1Q92886 237 aa11.55□□□□□ -0.56
SMC6-201ENST00000351948 DEDDO75618 318 aa11.54□□□□□ -0.56
SMC6-201ENST00000351948 NRIP2Q9BQI9 281 aa11.54□□□□□ -0.56
SMC6-201ENST00000351948 C7orf69Q9H7B7 122 aa11.54□□□□□ -0.56
SMC6-201ENST00000351948 IGHV3OR16-13A0A075B7E8 117 aa11.54□□□□□ -0.56
SMC6-201ENST00000351948 IGHV3-74A0A0B4J1X5 117 aa11.54□□□□□ -0.56
SMC6-201ENST00000351948 XKRY2A2RUG3 117 aa11.54□□□□□ -0.56
SMC6-201ENST00000351948 F8VVB4 439 aa11.54□□□□□ -0.56
SMC6-201ENST00000351948 F8VWA3 439 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms