RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 MRPL54Q6P161 138 aaKnown RBP12.53□□□□□ -0.4
NUP50-201ENST00000347635 CYP2G1PQ6ZSU1 146 aa12.53□□□□□ -0.4
NUP50-201ENST00000347635 BRWD1Q9NSI6 2320 aa12.53□□□□□ -0.4
NUP50-201ENST00000347635 IGKV1D-13A0A0B4J2D9 117 aa12.53□□□□□ -0.4
NUP50-201ENST00000347635 IGKV1-13P0DP09 117 aa12.53□□□□□ -0.4
NUP50-201ENST00000347635 PAX5Q02548 391 aa12.53□□□□□ -0.4
NUP50-201ENST00000347635 NRN1LQ496H8 165 aa12.53□□□□□ -0.4
NUP50-201ENST00000347635 SCNM1Q9BWG6 230 aa12.53□□□□□ -0.4
NUP50-201ENST00000347635 C1QL4Q86Z23 238 aa12.52□□□□□ -0.4
NUP50-201ENST00000347635 ZNF525Q8N782 197 aa12.52□□□□□ -0.4
NUP50-201ENST00000347635 NABP1Q96AH0 204 aa12.52□□□□□ -0.4
NUP50-201ENST00000347635 CRYGSP22914 178 aa12.52□□□□□ -0.41
NUP50-201ENST00000347635 PRDX2P32119 198 aa12.52□□□□□ -0.41
NUP50-201ENST00000347635 CSN1S1P47710 185 aa12.52□□□□□ -0.41
NUP50-201ENST00000347635 PRRX1P54821 245 aa12.52□□□□□ -0.41
NUP50-201ENST00000347635 MOGAT3Q86VF5 341 aa12.52□□□□□ -0.41
NUP50-201ENST00000347635 WIPI2Q9Y4P8 454 aa12.52□□□□□ -0.41
NUP50-201ENST00000347635 SLC31A2O15432 143 aa12.52□□□□□ -0.41
NUP50-201ENST00000347635 VENTXO95231 258 aa12.52□□□□□ -0.41
NUP50-201ENST00000347635 ETFRF1Q6IPR1 90 aa12.52□□□□□ -0.41
NUP50-201ENST00000347635 SMIM15Q7Z3B0 74 aa12.52□□□□□ -0.41
NUP50-201ENST00000347635 REPIN1Q9BWE0 567 aaKnown RBP12.52□□□□□ -0.41
NUP50-201ENST00000347635 M0R2Z0 102 aa12.52□□□□□ -0.41
NUP50-201ENST00000347635 HIST1H2BKO60814 126 aa12.52□□□□□ -0.41
NUP50-201ENST00000347635 HIST1H2BJP06899 126 aa12.52□□□□□ -0.41
NUP50-201ENST00000347635 HIST1H2BOP23527 126 aa12.52□□□□□ -0.41
NUP50-201ENST00000347635 HIST1H2BBP33778 126 aa12.52□□□□□ -0.41
NUP50-201ENST00000347635 HIST1H2BDP58876 126 aa12.52□□□□□ -0.41
NUP50-201ENST00000347635 HIST1H2BCP62807 126 aa12.52□□□□□ -0.41
NUP50-201ENST00000347635 SCGB2A2Q13296 93 aa12.52□□□□□ -0.41
NUP50-201ENST00000347635 HIST2H2BEQ16778 126 aa12.52□□□□□ -0.41
NUP50-201ENST00000347635 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.52□□□□□ -0.41
NUP50-201ENST00000347635 HIST1H2BHQ93079 126 aa12.52□□□□□ -0.41
NUP50-201ENST00000347635 HIST1H2BNQ99877 126 aa12.52□□□□□ -0.41
NUP50-201ENST00000347635 HIST1H2BMQ99879 126 aa12.52□□□□□ -0.41
NUP50-201ENST00000347635 SERTM2A0A1B0GWG4 89 aa12.51□□□□□ -0.41
NUP50-201ENST00000347635 C5orf63A6NC05 138 aa12.51□□□□□ -0.41
NUP50-201ENST00000347635 MARCH11A6NNE9 402 aa12.51□□□□□ -0.41
NUP50-201ENST00000347635 BLNKQ8WV28 456 aa12.51□□□□□ -0.41
NUP50-201ENST00000347635 PROB1E7EW31 1015 aa12.51□□□□□ -0.41
NUP50-201ENST00000347635 CEACAM3P40198 252 aa12.51□□□□□ -0.41
NUP50-201ENST00000347635 ID3Q02535 119 aa12.51□□□□□ -0.41
NUP50-201ENST00000347635 SPNS3Q6ZMD2 512 aa12.51□□□□□ -0.41
NUP50-201ENST00000347635 ZNF826PQ6ZT77 177 aa12.51□□□□□ -0.41
NUP50-201ENST00000347635 STARD4Q96DR4 205 aa12.51□□□□□ -0.41
NUP50-201ENST00000347635 HSPB9Q9BQS6 159 aa12.51□□□□□ -0.41
NUP50-201ENST00000347635 OPN3Q9H1Y3 402 aaPredicted RBP12.51□□□□□ -0.41
NUP50-201ENST00000347635 IGKV1-12A0A0C4DH73 117 aa12.51□□□□□ -0.41
NUP50-201ENST00000347635 A0A0G2JMM0 328 aa12.51□□□□□ -0.41
NUP50-201ENST00000347635 A0A1W2PPB8 328 aa12.51□□□□□ -0.41
NUP50-201ENST00000347635 A0A1W2PRS3 328 aa12.51□□□□□ -0.41
NUP50-201ENST00000347635 CEACAM18A8MTB9 384 aa12.51□□□□□ -0.41
NUP50-201ENST00000347635 KIR3DP1A8MWS1 328 aa12.51□□□□□ -0.41
NUP50-201ENST00000347635 IGKV1D-12P01611 117 aa12.51□□□□□ -0.41
NUP50-201ENST00000347635 CAMPP49913 170 aa12.51□□□□□ -0.41
NUP50-201ENST00000347635 MISP3Q96FF7 219 aa12.51□□□□□ -0.41
NUP50-201ENST00000347635 SIGLEC12Q96PQ1 595 aa12.51□□□□□ -0.41
NUP50-201ENST00000347635 IL19Q9UHD0 177 aa12.51□□□□□ -0.41
NUP50-201ENST00000347635 IGHV3OR15-7A0A075B7D8 119 aa12.51□□□□□ -0.41
NUP50-201ENST00000347635 APCSP02743 223 aa12.51□□□□□ -0.41
NUP50-201ENST00000347635 MIC13Q5XKP0 118 aa12.51□□□□□ -0.41
NUP50-201ENST00000347635 OR8B3Q8NGG8 313 aa12.51□□□□□ -0.41
NUP50-201ENST00000347635 OR8B2Q96RD0 313 aa12.51□□□□□ -0.41
NUP50-201ENST00000347635 OR51B2Q9Y5P1 312 aa12.51□□□□□ -0.41
NUP50-201ENST00000347635 AHCTF1Q8WYP5 2266 aa12.5□□□□□ -0.41
NUP50-201ENST00000347635 IGKV1-27A0A075B6S5 117 aa12.5□□□□□ -0.41
NUP50-201ENST00000347635 KLF7O75840 302 aaPredicted RBP12.5□□□□□ -0.41
NUP50-201ENST00000347635 ARL14EPLP0DKL9 152 aa12.5□□□□□ -0.41
NUP50-201ENST00000347635 NPCDR1Q9BY65 106 aa12.5□□□□□ -0.41
NUP50-201ENST00000347635 DIRC3C9JPN6 131 aa12.5□□□□□ -0.41
NUP50-201ENST00000347635 BRS3P32247 399 aa12.5□□□□□ -0.41
NUP50-201ENST00000347635 PTGDSP41222 190 aa12.5□□□□□ -0.41
NUP50-201ENST00000347635 ZNF524Q96C55 264 aa12.5□□□□□ -0.41
NUP50-201ENST00000347635 OR4C5Q8NGB2 326 aa12.5□□□□□ -0.41
NUP50-201ENST00000347635 BET1LQ9NYM9 111 aa12.5□□□□□ -0.41
NUP50-201ENST00000347635 RTP5Q14D33 572 aa12.5□□□□□ -0.41
NUP50-201ENST00000347635 ABLIM2Q6H8Q1 611 aa12.5□□□□□ -0.41
NUP50-201ENST00000347635 ANAPC10Q9UM13 185 aa12.5□□□□□ -0.41
NUP50-201ENST00000347635 C10orf91Q5T1B1 145 aa12.49□□□□□ -0.41
NUP50-201ENST00000347635 SFRP2Q96HF1 295 aa12.49□□□□□ -0.41
NUP50-201ENST00000347635 MRPL18Q9H0U6 180 aaKnown RBP12.49□□□□□ -0.41
NUP50-201ENST00000347635 FREM3P0C091 2139 aa12.49□□□□□ -0.41
NUP50-201ENST00000347635 RHBDL1O75783 438 aa12.49□□□□□ -0.41
NUP50-201ENST00000347635 PDPNQ86YL7 162 aa12.49□□□□□ -0.41
NUP50-201ENST00000347635 TGIF2LYQ8IUE0 185 aa12.49□□□□□ -0.41
NUP50-201ENST00000347635 TMEM171Q8WVE6 324 aa12.49□□□□□ -0.41
NUP50-201ENST00000347635 J3QR06 171 aa12.49□□□□□ -0.41
NUP50-201ENST00000347635 C1orf162Q8NEQ5 155 aaPredicted RBP12.49□□□□□ -0.41
NUP50-201ENST00000347635 HELZP42694 1942 aaKnown RBP12.49□□□□□ -0.41
NUP50-201ENST00000347635 CXCL1P09341 107 aa12.49□□□□□ -0.41
NUP50-201ENST00000347635 Q6ZT83 130 aa12.49□□□□□ -0.41
NUP50-201ENST00000347635 WFIKKN1Q96NZ8 548 aa12.49□□□□□ -0.41
NUP50-201ENST00000347635 QTRT1Q9BXR0 403 aaKnown RBP12.49□□□□□ -0.41
NUP50-201ENST00000347635 KIF26BQ2KJY2 2108 aa12.48□□□□□ -0.41
NUP50-201ENST00000347635 A0A1W2PN81 502 aa12.48□□□□□ -0.41
NUP50-201ENST00000347635 A0A1W2PPE3 182 aa12.48□□□□□ -0.41
NUP50-201ENST00000347635 MT-ND6P03923 174 aa12.48□□□□□ -0.41
NUP50-201ENST00000347635 PEAR1Q5VY43 1037 aaPredicted RBP12.48□□□□□ -0.41
NUP50-201ENST00000347635 ZIC4Q8N9L1 334 aa12.48□□□□□ -0.41
NUP50-201ENST00000347635 MGST3O14880 152 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms