RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 ATP6V0CP27449 155 aa9.29□□□□□ -0.92
CLCN6-202ENST00000346436 C19orf54Q5BKX5 351 aa9.29□□□□□ -0.92
CLCN6-202ENST00000346436 GLRX5Q86SX6 157 aa9.29□□□□□ -0.92
CLCN6-202ENST00000346436 OR4B1Q8NGF8 309 aa9.29□□□□□ -0.92
CLCN6-202ENST00000346436 OR2W1Q9Y3N9 320 aa9.29□□□□□ -0.92
CLCN6-202ENST00000346436 OR51B2Q9Y5P1 312 aa9.29□□□□□ -0.92
CLCN6-202ENST00000346436 LOC390937A0A1W2PQ73 354 aa9.28□□□□□ -0.92
CLCN6-202ENST00000346436 H0Y8G0 127 aa9.28□□□□□ -0.92
CLCN6-202ENST00000346436 CD33P20138 364 aa9.28□□□□□ -0.92
CLCN6-202ENST00000346436 FFAR4Q5NUL3 377 aa9.28□□□□□ -0.92
CLCN6-202ENST00000346436 APCDD1LQ8NCL9 501 aa9.28□□□□□ -0.92
CLCN6-202ENST00000346436 CALYQ9NYX4 217 aa9.28□□□□□ -0.92
CLCN6-202ENST00000346436 A0A1W2PRX2 142 aa9.28□□□□□ -0.92
CLCN6-202ENST00000346436 A8MXK9 166 aa9.28□□□□□ -0.92
CLCN6-202ENST00000346436 DEDDO75618 318 aa9.28□□□□□ -0.92
CLCN6-202ENST00000346436 CRISP2P16562 243 aa9.28□□□□□ -0.92
CLCN6-202ENST00000346436 NPY1RP25929 384 aa9.28□□□□□ -0.92
CLCN6-202ENST00000346436 DLK1P80370 383 aa9.28□□□□□ -0.92
CLCN6-202ENST00000346436 C10orf113Q5VZT2 155 aa9.28□□□□□ -0.92
CLCN6-202ENST00000346436 MRPL14Q6P1L8 145 aaKnown RBP9.28□□□□□ -0.92
CLCN6-202ENST00000346436 COMMD1Q8N668 190 aa9.28□□□□□ -0.92
CLCN6-202ENST00000346436 V9GYS6 101 aa9.28□□□□□ -0.92
CLCN6-202ENST00000346436 ODAMA1E959 279 aa9.28□□□□□ -0.92
CLCN6-202ENST00000346436 MFNGO00587 321 aa9.28□□□□□ -0.92
CLCN6-202ENST00000346436 TMEM50BP56557 158 aa9.28□□□□□ -0.92
CLCN6-202ENST00000346436 ZNF66Q6ZN08 573 aa9.28□□□□□ -0.92
CLCN6-202ENST00000346436 OR13A1Q8NGR1 328 aa9.28□□□□□ -0.92
CLCN6-202ENST00000346436 MRGPRFQ96AM1 343 aa9.28□□□□□ -0.92
CLCN6-202ENST00000346436 CACNA1BQ00975 2339 aa9.28□□□□□ -0.92
CLCN6-202ENST00000346436 SVILO95425 2214 aa9.28□□□□□ -0.92
CLCN6-202ENST00000346436 EP300Q09472 2414 aaPredicted RBP9.28□□□□□ -0.92
CLCN6-202ENST00000346436 MAP1LC3B2A6NCE7 125 aa9.28□□□□□ -0.92
CLCN6-202ENST00000346436 CD8AP01732 235 aa9.28□□□□□ -0.92
CLCN6-202ENST00000346436 SCTP09683 121 aa9.28□□□□□ -0.92
CLCN6-202ENST00000346436 RARRES2Q99969 163 aa9.28□□□□□ -0.92
CLCN6-202ENST00000346436 MAP1LC3BQ9GZQ8 125 aa9.28□□□□□ -0.92
CLCN6-202ENST00000346436 CA7P43166 264 aa9.27□□□□□ -0.92
CLCN6-202ENST00000346436 OR4X1Q8NH49 305 aa9.27□□□□□ -0.92
CLCN6-202ENST00000346436 RCC2Q9P258 522 aaKnown RBP9.27□□□□□ -0.92
CLCN6-202ENST00000346436 ICE1Q9Y2F5 2266 aa9.27□□□□□ -0.93
CLCN6-202ENST00000346436 FAM90A10PA6NDY2 464 aa9.27□□□□□ -0.93
CLCN6-202ENST00000346436 FAM90A18PA6NE21 464 aa9.27□□□□□ -0.93
CLCN6-202ENST00000346436 FAM90A16PA6NEW6 464 aa9.27□□□□□ -0.93
CLCN6-202ENST00000346436 FAM90A20PA6NIJ5 464 aa9.27□□□□□ -0.93
CLCN6-202ENST00000346436 FAM90A8PA6NJQ4 464 aa9.27□□□□□ -0.93
CLCN6-202ENST00000346436 FAM90A7PA6NKC0 464 aa9.27□□□□□ -0.93
CLCN6-202ENST00000346436 FAM90A22PA8MWA6 464 aa9.27□□□□□ -0.93
CLCN6-202ENST00000346436 FAM90A12PA8MX19 464 aa9.27□□□□□ -0.93
CLCN6-202ENST00000346436 FAM90A5PA8MXJ8 464 aa9.27□□□□□ -0.93
CLCN6-202ENST00000346436 FAM90A23PA8MXZ1 464 aa9.27□□□□□ -0.93
CLCN6-202ENST00000346436 J3KRW8 73 aa9.27□□□□□ -0.93
CLCN6-202ENST00000346436 FAM90A15PP0C7V4 464 aa9.27□□□□□ -0.93
CLCN6-202ENST00000346436 FAM90A13PP0C7W8 464 aa9.27□□□□□ -0.93
CLCN6-202ENST00000346436 FAM90A14PP0C7W9 464 aa9.27□□□□□ -0.93
CLCN6-202ENST00000346436 FAM90A24PP0C7X0 464 aa9.27□□□□□ -0.93
CLCN6-202ENST00000346436 PSG2P11465 335 aa9.27□□□□□ -0.93
CLCN6-202ENST00000346436 ERVS71-1P61550 626 aa9.27□□□□□ -0.93
CLCN6-202ENST00000346436 MEGF10Q96KG7 1140 aa9.27□□□□□ -0.93
CLCN6-202ENST00000346436 LOC102723996A0A087X1L8 192 aa9.27□□□□□ -0.93
CLCN6-202ENST00000346436 IGKV3D-11A0A0A0MRZ8 115 aa9.27□□□□□ -0.93
CLCN6-202ENST00000346436 C17orf100A8MU93 164 aa9.27□□□□□ -0.93
CLCN6-202ENST00000346436 H3BQ15 152 aa9.27□□□□□ -0.93
CLCN6-202ENST00000346436 NPPCP23582 126 aa9.27□□□□□ -0.93
CLCN6-202ENST00000346436 PTGDSP41222 190 aa9.27□□□□□ -0.93
CLCN6-202ENST00000346436 SULT1A2P50226 295 aa9.27□□□□□ -0.93
CLCN6-202ENST00000346436 RPL8P62917 257 aaKnown RBP9.27□□□□□ -0.93
CLCN6-202ENST00000346436 C19orf35Q6ZS72 473 aa9.27□□□□□ -0.93
CLCN6-202ENST00000346436 TMEM18Q96B42 140 aa9.27□□□□□ -0.93
CLCN6-202ENST00000346436 FAM103A1Q9BTL3 118 aaKnown RBP9.27□□□□□ -0.93
CLCN6-202ENST00000346436 NOTCH4Q99466 2003 aa9.27□□□□□ -0.93
CLCN6-202ENST00000346436 HELZP42694 1942 aaKnown RBP9.27□□□□□ -0.93
CLCN6-202ENST00000346436 C1QTNF9BB2RNN3 333 aa9.27□□□□□ -0.93
CLCN6-202ENST00000346436 NDUFS8O00217 210 aa9.27□□□□□ -0.93
CLCN6-202ENST00000346436 RHBDL1O75783 438 aa9.27□□□□□ -0.93
CLCN6-202ENST00000346436 C1QTNF9P0C862 333 aa9.27□□□□□ -0.93
CLCN6-202ENST00000346436 NSUN5P1Q3KNT7 163 aa9.27□□□□□ -0.93
CLCN6-202ENST00000346436 RNF144BQ7Z419 303 aa9.27□□□□□ -0.93
CLCN6-202ENST00000346436 C5orf17Q8NAS9 161 aa9.27□□□□□ -0.93
CLCN6-202ENST00000346436 IMMP1LQ96LU5 166 aa9.27□□□□□ -0.93
CLCN6-202ENST00000346436 SRXN1Q9BYN0 137 aa9.27□□□□□ -0.93
CLCN6-202ENST00000346436 AURKAIP1Q9NWT8 199 aaPredicted RBP9.27□□□□□ -0.93
CLCN6-202ENST00000346436 DTD1Q8TEA8 209 aa9.26□□□□□ -0.93
CLCN6-202ENST00000346436 ZNF837Q96EG3 531 aaPredicted RBP9.26□□□□□ -0.93
CLCN6-202ENST00000346436 KIAA1324LA8MWY0 1029 aaPredicted RBP9.26□□□□□ -0.93
CLCN6-202ENST00000346436 AP4M1O00189 453 aa9.26□□□□□ -0.93
CLCN6-202ENST00000346436 ZNF737O75373 536 aa9.26□□□□□ -0.93
CLCN6-202ENST00000346436 HYPMO75409 117 aa9.26□□□□□ -0.93
CLCN6-202ENST00000346436 FGF12P61328 243 aa9.26□□□□□ -0.93
CLCN6-202ENST00000346436 SELENOTP62341 195 aa9.26□□□□□ -0.93
CLCN6-202ENST00000346436 FAM210BQ96KR6 192 aa9.26□□□□□ -0.93
CLCN6-202ENST00000346436 JPT1Q9UK76 154 aa9.26□□□□□ -0.93
CLCN6-202ENST00000346436 NPBWR2P48146 333 aa9.26□□□□□ -0.93
CLCN6-202ENST00000346436 RBM11P57052 281 aaKnown RBP9.26□□□□□ -0.93
CLCN6-202ENST00000346436 SLC25A53Q5H9E4 307 aa9.26□□□□□ -0.93
CLCN6-202ENST00000346436 Q6ZN92 141 aa9.26□□□□□ -0.93
CLCN6-202ENST00000346436 MS4A10Q96PG2 267 aa9.26□□□□□ -0.93
CLCN6-202ENST00000346436 IGHV3-72A0A0B4J1Y9 119 aa9.26□□□□□ -0.93
CLCN6-202ENST00000346436 IGHMP01871 453 aa9.26□□□□□ -0.93
CLCN6-202ENST00000346436 IGFBP3P17936 291 aaPredicted RBP9.26□□□□□ -0.93
CLCN6-202ENST00000346436 FHL1Q13642 323 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms