RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 LINC00312Q9Y6C7 94 aa11.63□□□□□ -0.55
CDK5RAP1-202ENST00000346416 LRBAP50851 2863 aa11.63□□□□□ -0.55
CDK5RAP1-202ENST00000346416 SAA2-SAA4A0A096LPE2 208 aa11.63□□□□□ -0.55
CDK5RAP1-202ENST00000346416 TRIM77I1YAP6 450 aa11.63□□□□□ -0.55
CDK5RAP1-202ENST00000346416 SAA2P0DJI9 122 aaPredicted RBP11.63□□□□□ -0.55
CDK5RAP1-202ENST00000346416 ADCYAP1P18509 176 aa11.63□□□□□ -0.55
CDK5RAP1-202ENST00000346416 PRAMEF5Q5TYX0 476 aa11.63□□□□□ -0.55
CDK5RAP1-202ENST00000346416 HAPLN4Q86UW8 402 aa11.63□□□□□ -0.55
CDK5RAP1-202ENST00000346416 ZNF439Q8NDP4 499 aa11.63□□□□□ -0.55
CDK5RAP1-202ENST00000346416 S1PR3Q99500 378 aa11.63□□□□□ -0.55
CDK5RAP1-202ENST00000346416 UQCC1Q9NVA1 299 aa11.63□□□□□ -0.55
CDK5RAP1-202ENST00000346416 PRELID3BQ9Y3B1 194 aa11.63□□□□□ -0.55
CDK5RAP1-202ENST00000346416 UMAD1C9J7I0 102 aa11.62□□□□□ -0.55
CDK5RAP1-202ENST00000346416 RBFOX2O43251 390 aaKnown RBP eCLIP11.62□□□□□ -0.55
CDK5RAP1-202ENST00000346416 GNG10P50151 68 aa11.62□□□□□ -0.55
CDK5RAP1-202ENST00000346416 HBG1P69891 147 aa11.62□□□□□ -0.55
CDK5RAP1-202ENST00000346416 HBG2P69892 147 aa11.62□□□□□ -0.55
CDK5RAP1-202ENST00000346416 LYG1Q8N1E2 194 aa11.62□□□□□ -0.55
CDK5RAP1-202ENST00000346416 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.62□□□□□ -0.55
CDK5RAP1-202ENST00000346416 FAM213BQ8TBF2 198 aa11.62□□□□□ -0.55
CDK5RAP1-202ENST00000346416 PRORYQ9H606 182 aa11.62□□□□□ -0.55
CDK5RAP1-202ENST00000346416 RPUSD1Q9UJJ7 312 aaKnown RBP11.62□□□□□ -0.55
CDK5RAP1-202ENST00000346416 CACNA1AO00555 2505 aa11.62□□□□□ -0.55
CDK5RAP1-202ENST00000346416 RNASEK-C17orf49H0YIS7 233 aa11.62□□□□□ -0.55
CDK5RAP1-202ENST00000346416 TNFRSF13BO14836 293 aaPredicted RBP11.62□□□□□ -0.55
CDK5RAP1-202ENST00000346416 IFNA5P01569 189 aa11.62□□□□□ -0.55
CDK5RAP1-202ENST00000346416 ERVFRD-1P60508 538 aa11.62□□□□□ -0.55
CDK5RAP1-202ENST00000346416 MRPS11P82912 194 aaKnown RBP11.62□□□□□ -0.55
CDK5RAP1-202ENST00000346416 MEF2CQ06413 473 aaPredicted RBP11.62□□□□□ -0.55
CDK5RAP1-202ENST00000346416 TMEM30BQ3MIR4 351 aa11.62□□□□□ -0.55
CDK5RAP1-202ENST00000346416 SLC25A24Q6NUK1 477 aa11.62□□□□□ -0.55
CDK5RAP1-202ENST00000346416 LYPD2Q6UXB3 125 aa11.62□□□□□ -0.55
CDK5RAP1-202ENST00000346416 TMEM14EPQ6UXP3 125 aa11.62□□□□□ -0.55
CDK5RAP1-202ENST00000346416 SSX9Q7RTT3 188 aa11.62□□□□□ -0.55
CDK5RAP1-202ENST00000346416 DDB2Q92466 427 aa11.62□□□□□ -0.55
CDK5RAP1-202ENST00000346416 ZDHHC16Q969W1 377 aa11.62□□□□□ -0.55
CDK5RAP1-202ENST00000346416 ZNF251Q9BRH9 671 aa11.62□□□□□ -0.55
CDK5RAP1-202ENST00000346416 IGHV1-69-2A0A0G2JMI3 117 aa11.61□□□□□ -0.55
CDK5RAP1-202ENST00000346416 F8W036 122 aa11.61□□□□□ -0.55
CDK5RAP1-202ENST00000346416 ZG16O60844 167 aa11.61□□□□□ -0.55
CDK5RAP1-202ENST00000346416 CD5P06127 495 aa11.61□□□□□ -0.55
CDK5RAP1-202ENST00000346416 OR9G9P0C7N8 305 aa11.61□□□□□ -0.55
CDK5RAP1-202ENST00000346416 C10orf91Q5T1B1 145 aa11.61□□□□□ -0.55
CDK5RAP1-202ENST00000346416 VKORC1L1Q8N0U8 176 aa11.61□□□□□ -0.55
CDK5RAP1-202ENST00000346416 MUC15Q8N387 334 aa11.61□□□□□ -0.55
CDK5RAP1-202ENST00000346416 LILRB2Q8N423 598 aa11.61□□□□□ -0.55
CDK5RAP1-202ENST00000346416 ZNF525Q8N782 197 aa11.61□□□□□ -0.55
CDK5RAP1-202ENST00000346416 DTD1Q8TEA8 209 aa11.61□□□□□ -0.55
CDK5RAP1-202ENST00000346416 GAL3ST2Q9H3Q3 398 aa11.61□□□□□ -0.55
CDK5RAP1-202ENST00000346416 CARHSP1Q9Y2V2 147 aaKnown RBP11.61□□□□□ -0.55
CDK5RAP1-202ENST00000346416 SPTBN1Q01082 2364 aaKnown RBP11.61□□□□□ -0.55
CDK5RAP1-202ENST00000346416 DNASE2O00115 360 aaPredicted RBP11.6□□□□□ -0.55
CDK5RAP1-202ENST00000346416 NDUFB3O43676 98 aa11.6□□□□□ -0.55
CDK5RAP1-202ENST00000346416 SNCAP37840 140 aa11.6□□□□□ -0.55
CDK5RAP1-202ENST00000346416 KIR2DS2P43631 304 aa11.6□□□□□ -0.55
CDK5RAP1-202ENST00000346416 THNSL2Q86YJ6 484 aa11.6□□□□□ -0.55
CDK5RAP1-202ENST00000346416 QTRT1Q9BXR0 403 aaKnown RBP11.6□□□□□ -0.55
CDK5RAP1-202ENST00000346416 SEC11CQ9BY50 192 aa11.6□□□□□ -0.55
CDK5RAP1-202ENST00000346416 HIVEP3Q5T1R4 2406 aa11.6□□□□□ -0.55
CDK5RAP1-202ENST00000346416 NUPL2O15504 423 aaKnown RBP11.6□□□□□ -0.55
CDK5RAP1-202ENST00000346416 SFTPCP11686 197 aa11.6□□□□□ -0.55
CDK5RAP1-202ENST00000346416 NQO2P16083 231 aa11.6□□□□□ -0.55
CDK5RAP1-202ENST00000346416 CCL3L1P16619 93 aa11.6□□□□□ -0.55
CDK5RAP1-202ENST00000346416 DVL1P1P54792 670 aaPredicted RBP11.6□□□□□ -0.55
CDK5RAP1-202ENST00000346416 OR2B8PP59922 312 aa11.6□□□□□ -0.55
CDK5RAP1-202ENST00000346416 LRRC10Q5BKY1 277 aa11.6□□□□□ -0.55
CDK5RAP1-202ENST00000346416 SPINK9Q5DT21 86 aa11.6□□□□□ -0.55
CDK5RAP1-202ENST00000346416 TMEM200BQ69YZ2 307 aa11.6□□□□□ -0.55
CDK5RAP1-202ENST00000346416 OR8G2PQ6IF36 304 aa11.6□□□□□ -0.55
CDK5RAP1-202ENST00000346416 SLC25A48Q6ZT89 311 aaKnown RBP11.6□□□□□ -0.55
CDK5RAP1-202ENST00000346416 COMMD1Q8N668 190 aa11.6□□□□□ -0.55
CDK5RAP1-202ENST00000346416 OR4S2Q8NH73 311 aa11.6□□□□□ -0.55
CDK5RAP1-202ENST00000346416 H1FXQ92522 213 aaKnown RBP11.6□□□□□ -0.55
CDK5RAP1-202ENST00000346416 ZNF714Q96N38 554 aa11.6□□□□□ -0.55
CDK5RAP1-202ENST00000346416 OR4C12Q96R67 309 aa11.6□□□□□ -0.55
CDK5RAP1-202ENST00000346416 CTSZQ9UBR2 303 aa11.6□□□□□ -0.55
CDK5RAP1-202ENST00000346416 FBXO7Q9Y3I1 522 aa11.6□□□□□ -0.55
CDK5RAP1-202ENST00000346416 FAM90A9PA6NNJ1 464 aa11.59□□□□□ -0.55
CDK5RAP1-202ENST00000346416 CEBPZOSA8MTT3 80 aa11.59□□□□□ -0.55
CDK5RAP1-202ENST00000346416 C9JQL5 133 aa11.59□□□□□ -0.55
CDK5RAP1-202ENST00000346416 ERVK-16P61578 105 aa11.59□□□□□ -0.55
CDK5RAP1-202ENST00000346416 SLC38A11Q08AI6 406 aa11.59□□□□□ -0.55
CDK5RAP1-202ENST00000346416 HFEQ30201 348 aa11.59□□□□□ -0.55
CDK5RAP1-202ENST00000346416 ZNF672Q499Z4 452 aaPredicted RBP11.59□□□□□ -0.55
CDK5RAP1-202ENST00000346416 HEPN1Q6WQI6 88 aa11.59□□□□□ -0.55
CDK5RAP1-202ENST00000346416 ZNF383Q8NA42 475 aa11.59□□□□□ -0.55
CDK5RAP1-202ENST00000346416 SCGB1C1Q8TD33 95 aa11.59□□□□□ -0.55
CDK5RAP1-202ENST00000346416 CIB3Q96Q77 187 aaPredicted RBP11.59□□□□□ -0.55
CDK5RAP1-202ENST00000346416 ZNRD1Q9P1U0 126 aa11.59□□□□□ -0.55
CDK5RAP1-202ENST00000346416 PKD1L2Q7Z442 2459 aa11.59□□□□□ -0.55
CDK5RAP1-202ENST00000346416 A0A1B0GV50 99 aa11.59□□□□□ -0.55
CDK5RAP1-202ENST00000346416 DVL1O14640 695 aa11.59□□□□□ -0.55
CDK5RAP1-202ENST00000346416 THBS3P49746 956 aa11.59□□□□□ -0.55
CDK5RAP1-202ENST00000346416 GUCA2BQ16661 112 aa11.59□□□□□ -0.55
CDK5RAP1-202ENST00000346416 AARDQ4LEZ3 155 aa11.59□□□□□ -0.55
CDK5RAP1-202ENST00000346416 AKR1C8PQ5T2L2 129 aa11.59□□□□□ -0.55
CDK5RAP1-202ENST00000346416 OR10A7Q8NGE5 316 aa11.59□□□□□ -0.55
CDK5RAP1-202ENST00000346416 OR4A16Q8NH70 328 aa11.59□□□□□ -0.55
CDK5RAP1-202ENST00000346416 RSG1Q9BU20 258 aa11.59□□□□□ -0.55
CDK5RAP1-202ENST00000346416 KAAG1Q9UBP8 84 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms