RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 ZNF729A6NN14 1252 aaPredicted RBP16.81■□□□□ 0.28
HDAC4-201ENST00000345617 ARHGAP21Q5T5U3 1957 aa16.81■□□□□ 0.28
HDAC4-201ENST00000345617 MMD2Q8IY49 270 aa16.81■□□□□ 0.28
HDAC4-201ENST00000345617 CDIPTO14735 213 aa16.81■□□□□ 0.28
HDAC4-201ENST00000345617 VSIG10L2P0DP72 767 aa16.81■□□□□ 0.28
HDAC4-201ENST00000345617 RHBDD2Q6NTF9 364 aa16.81■□□□□ 0.28
HDAC4-201ENST00000345617 SAXO1Q8IYX7 474 aa16.81■□□□□ 0.28
HDAC4-201ENST00000345617 SMIM8Q96KF7 97 aa16.81■□□□□ 0.28
HDAC4-201ENST00000345617 TUBA4BQ9H853 241 aa16.81■□□□□ 0.28
HDAC4-201ENST00000345617 RIF1Q5UIP0 2472 aaKnown RBP16.81■□□□□ 0.28
HDAC4-201ENST00000345617 EML5Q05BV3 1969 aa16.81■□□□□ 0.28
HDAC4-201ENST00000345617 WNT5AP41221 380 aa16.81■□□□□ 0.28
HDAC4-201ENST00000345617 NUBP1P53384 320 aa16.81■□□□□ 0.28
HDAC4-201ENST00000345617 TMEM91Q6ZNR0 172 aa16.81■□□□□ 0.28
HDAC4-201ENST00000345617 GCSAMQ8N6F7 178 aa16.81■□□□□ 0.28
HDAC4-201ENST00000345617 IMMP2LQ96T52 175 aa16.81■□□□□ 0.28
HDAC4-201ENST00000345617 ODAMA1E959 279 aa16.8■□□□□ 0.28
HDAC4-201ENST00000345617 GPBAR1Q8TDU6 330 aa16.8■□□□□ 0.28
HDAC4-201ENST00000345617 DERL1Q9BUN8 251 aa16.8■□□□□ 0.28
HDAC4-201ENST00000345617 A0A1B0GTH9 108 aa16.8■□□□□ 0.28
HDAC4-201ENST00000345617 FGF12P61328 243 aa16.8■□□□□ 0.28
HDAC4-201ENST00000345617 ZNF441Q8N8Z8 693 aa16.8■□□□□ 0.28
HDAC4-201ENST00000345617 ZNF576Q9H609 170 aa16.8■□□□□ 0.28
HDAC4-201ENST00000345617 PCOLCE2Q9UKZ9 415 aa16.8■□□□□ 0.28
HDAC4-201ENST00000345617 ANAPC1Q9H1A4 1944 aa16.8■□□□□ 0.28
HDAC4-201ENST00000345617 MARCH11A6NNE9 402 aa16.8■□□□□ 0.28
HDAC4-201ENST00000345617 RPL31P62899 125 aaKnown RBP16.8■□□□□ 0.28
HDAC4-201ENST00000345617 WDR54Q9H977 334 aa16.8■□□□□ 0.28
HDAC4-201ENST00000345617 OR2K2Q8NGT1 345 aa16.8■□□□□ 0.28
HDAC4-201ENST00000345617 SPANXCQ9NY87 97 aa16.8■□□□□ 0.28
HDAC4-201ENST00000345617 GLI3P10071 1580 aa16.8■□□□□ 0.28
HDAC4-201ENST00000345617 NGFRP08138 427 aa16.8■□□□□ 0.28
HDAC4-201ENST00000345617 TNFRSF9Q07011 255 aa16.8■□□□□ 0.28
HDAC4-201ENST00000345617 CA1P00915 261 aaPredicted RBP16.8■□□□□ 0.28
HDAC4-201ENST00000345617 ANOS1P23352 680 aa16.8■□□□□ 0.28
HDAC4-201ENST00000345617 ASIPP42127 132 aa16.8■□□□□ 0.28
HDAC4-201ENST00000345617 ID4P47928 161 aa16.8■□□□□ 0.28
HDAC4-201ENST00000345617 F11RQ9Y624 299 aaKnown RBP16.8■□□□□ 0.28
HDAC4-201ENST00000345617 RSPO2Q6UXX9 243 aaPredicted RBP16.79■□□□□ 0.28
HDAC4-201ENST00000345617 OR4C13Q8NGP0 309 aa16.79■□□□□ 0.28
HDAC4-201ENST00000345617 COX14Q96I36 57 aa16.79■□□□□ 0.28
HDAC4-201ENST00000345617 LPAR2Q9HBW0 351 aa16.79■□□□□ 0.28
HDAC4-201ENST00000345617 A0A1B0GWB2 263 aa16.79■□□□□ 0.28
HDAC4-201ENST00000345617 PDCD1Q15116 288 aa16.79■□□□□ 0.28
HDAC4-201ENST00000345617 DCAF12L2Q5VW00 463 aa16.79■□□□□ 0.28
HDAC4-201ENST00000345617 RABAC1Q9UI14 185 aa16.79■□□□□ 0.28
HDAC4-201ENST00000345617 COL18A1P39060 1754 aa16.79■□□□□ 0.28
HDAC4-201ENST00000345617 RNASE1P07998 156 aaKnown RBP16.79■□□□□ 0.28
HDAC4-201ENST00000345617 MMDQ15546 238 aa16.79■□□□□ 0.28
HDAC4-201ENST00000345617 OR51G1Q8NGK1 321 aa16.79■□□□□ 0.28
HDAC4-201ENST00000345617 PGLYRP4Q96LB8 373 aa16.79■□□□□ 0.28
HDAC4-201ENST00000345617 SPCS1Q9Y6A9 102 aa16.79■□□□□ 0.28
HDAC4-201ENST00000345617 FZR1Q9UM11 496 aa16.79■□□□□ 0.28
HDAC4-201ENST00000345617 HOXD4P09016 255 aaPredicted RBP16.79■□□□□ 0.28
HDAC4-201ENST00000345617 CCL7P80098 99 aa16.79■□□□□ 0.28
HDAC4-201ENST00000345617 ZNF418Q8TF45 676 aaPredicted RBP16.79■□□□□ 0.28
HDAC4-201ENST00000345617 TBL2Q9Y4P3 447 aaKnown RBP16.79■□□□□ 0.28
HDAC4-201ENST00000345617 A0A1W2PPC1 479 aa16.79■□□□□ 0.28
HDAC4-201ENST00000345617 C7orf71A4D174 169 aa16.79■□□□□ 0.28
HDAC4-201ENST00000345617 LINC01555Q8NAE3 123 aa16.79■□□□□ 0.28
HDAC4-201ENST00000345617 NUDT11Q96G61 164 aa16.79■□□□□ 0.28
HDAC4-201ENST00000345617 C5orf30Q96GV9 206 aa16.79■□□□□ 0.28
HDAC4-201ENST00000345617 SDHCQ99643 169 aaPredicted RBP16.79■□□□□ 0.28
HDAC4-201ENST00000345617 TMIGD3P0DMS9 266 aaPredicted RBP16.78■□□□□ 0.28
HDAC4-201ENST00000345617 ANAPC13Q9BS18 74 aa16.78■□□□□ 0.28
HDAC4-201ENST00000345617 ZSWIM8A7E2V4 1837 aa16.78■□□□□ 0.28
HDAC4-201ENST00000345617 C21orf140B9A014 251 aa16.78■□□□□ 0.28
HDAC4-201ENST00000345617 MT-CO3P00414 261 aa16.78■□□□□ 0.28
HDAC4-201ENST00000345617 OR4X2Q8NGF9 303 aa16.78■□□□□ 0.28
HDAC4-201ENST00000345617 LTBP4Q8N2S1 1624 aa16.78■□□□□ 0.28
HDAC4-201ENST00000345617 SIGMAR1Q99720 223 aa16.78■□□□□ 0.28
HDAC4-201ENST00000345617 PLXNB3Q9ULL4 1909 aa16.78■□□□□ 0.28
HDAC4-201ENST00000345617 ZNF658BQ4V348 819 aaPredicted RBP16.78■□□□□ 0.28
HDAC4-201ENST00000345617 FMC1Q96HJ9 113 aa16.78■□□□□ 0.28
HDAC4-201ENST00000345617 TNFSF14O43557 240 aa16.78■□□□□ 0.28
HDAC4-201ENST00000345617 FAM106CPP0CH98 169 aa16.78■□□□□ 0.28
HDAC4-201ENST00000345617 FAM27BQ5VT28 67 aa16.78■□□□□ 0.28
HDAC4-201ENST00000345617 MS4A5Q9H3V2 200 aa16.78■□□□□ 0.28
HDAC4-201ENST00000345617 NDUFA2O43678 99 aa16.78■□□□□ 0.28
HDAC4-201ENST00000345617 HTN1P15515 57 aa16.78■□□□□ 0.28
HDAC4-201ENST00000345617 SSBP4Q9BWG4 385 aaPredicted RBP16.78■□□□□ 0.28
HDAC4-201ENST00000345617 PRR13Q9NZ81 148 aa16.78■□□□□ 0.28
HDAC4-201ENST00000345617 TICRRQ7Z2Z1 1910 aa16.78■□□□□ 0.28
HDAC4-201ENST00000345617 A8MXK9 166 aa16.77■□□□□ 0.28
HDAC4-201ENST00000345617 ZIC1Q15915 447 aa16.77■□□□□ 0.28
HDAC4-201ENST00000345617 GPR82Q96P67 336 aa16.77■□□□□ 0.28
HDAC4-201ENST00000345617 CHODLQ9H9P2 273 aa16.77■□□□□ 0.28
HDAC4-201ENST00000345617 RND3P61587 244 aa16.77■□□□□ 0.28
HDAC4-201ENST00000345617 TRBV5-5A0A0J9YX44 114 aa16.77■□□□□ 0.28
HDAC4-201ENST00000345617 SLC25A20O43772 301 aa16.77■□□□□ 0.27
HDAC4-201ENST00000345617 C8orf88P0DMB2 117 aa16.77■□□□□ 0.27
HDAC4-201ENST00000345617 TMEM252Q8N6L7 170 aa16.77■□□□□ 0.27
HDAC4-201ENST00000345617 RBMY1BA6NDE4 496 aaKnown RBP16.76■□□□□ 0.27
HDAC4-201ENST00000345617 RBMY1EA6NEQ0 496 aaKnown RBP16.76■□□□□ 0.27
HDAC4-201ENST00000345617 RBMY1DP0C7P1 496 aaKnown RBP16.76■□□□□ 0.27
HDAC4-201ENST00000345617 RBMY1A1P0DJD3 496 aaKnown RBP16.76■□□□□ 0.27
HDAC4-201ENST00000345617 RBMY1CP0DJD4 496 aa16.76■□□□□ 0.27
HDAC4-201ENST00000345617 ZNF146Q15072 292 aa16.76■□□□□ 0.27
HDAC4-201ENST00000345617 TTC9CQ8N5M4 171 aa16.76■□□□□ 0.27
HDAC4-201ENST00000345617 SEC11AP67812 179 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms