RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 TIMM9Q9Y5J7 89 aa17.77■□□□□ 0.43
CCDC38-201ENST00000344280 GVINP1Q7Z2Y8 2422 aa17.76■□□□□ 0.43
CCDC38-201ENST00000344280 IGF2-ASQ6U949 168 aa17.76■□□□□ 0.43
CCDC38-201ENST00000344280 C1orf229Q6ZS94 237 aaPredicted RBP17.76■□□□□ 0.43
CCDC38-201ENST00000344280 SLC16A13Q7RTY0 426 aa17.76■□□□□ 0.43
CCDC38-201ENST00000344280 MRGPRGQ86SM5 289 aa17.76■□□□□ 0.43
CCDC38-201ENST00000344280 MRPL37Q9BZE1 423 aaKnown RBP17.76■□□□□ 0.43
CCDC38-201ENST00000344280 EDDM3BP56851 147 aa17.75■□□□□ 0.43
CCDC38-201ENST00000344280 LOXL3P58215 753 aa17.75■□□□□ 0.43
CCDC38-201ENST00000344280 C1QL4Q86Z23 238 aa17.75■□□□□ 0.43
CCDC38-201ENST00000344280 TCTEX1D1Q8N7M0 179 aa17.75■□□□□ 0.43
CCDC38-201ENST00000344280 LEAP2Q969E1 77 aa17.75■□□□□ 0.43
CCDC38-201ENST00000344280 MEGF10Q96KG7 1140 aa17.75■□□□□ 0.43
CCDC38-201ENST00000344280 VAX2Q9UIW0 290 aa17.75■□□□□ 0.43
CCDC38-201ENST00000344280 WASF3Q9UPY6 502 aa17.75■□□□□ 0.43
CCDC38-201ENST00000344280 CD81P60033 236 aa17.75■□□□□ 0.43
CCDC38-201ENST00000344280 MZT1Q08AG7 82 aa17.75■□□□□ 0.43
CCDC38-201ENST00000344280 DUX4L9Q6RFH8 374 aaPredicted RBP17.75■□□□□ 0.43
CCDC38-201ENST00000344280 GATAD1Q8WUU5 269 aa17.75■□□□□ 0.43
CCDC38-201ENST00000344280 SNX22Q96L94 193 aa17.75■□□□□ 0.43
CCDC38-201ENST00000344280 NPCDR1Q9BY65 106 aa17.75■□□□□ 0.43
CCDC38-201ENST00000344280 C15orf62A8K5M9 175 aa17.74■□□□□ 0.43
CCDC38-201ENST00000344280 TM4SF5O14894 197 aa17.74■□□□□ 0.43
CCDC38-201ENST00000344280 IFNA17P01571 189 aa17.74■□□□□ 0.43
CCDC38-201ENST00000344280 GZMHP20718 246 aa17.74■□□□□ 0.43
CCDC38-201ENST00000344280 TIMM23BQ5SRD1 257 aa17.74■□□□□ 0.43
CCDC38-201ENST00000344280 C1orf174Q8IYL3 243 aa17.74■□□□□ 0.43
CCDC38-201ENST00000344280 ITLN1Q8WWA0 313 aa17.74■□□□□ 0.43
CCDC38-201ENST00000344280 LAMP3Q9UQV4 416 aa17.74■□□□□ 0.43
CCDC38-201ENST00000344280 M0R1X1 148 aa17.74■□□□□ 0.43
CCDC38-201ENST00000344280 MGST3O14880 152 aa17.74■□□□□ 0.43
CCDC38-201ENST00000344280 SLC31A2O15432 143 aa17.74■□□□□ 0.43
CCDC38-201ENST00000344280 NKX6-1P78426 367 aaPredicted RBP17.74■□□□□ 0.43
CCDC38-201ENST00000344280 ATP6V1FQ16864 119 aa17.74■□□□□ 0.43
CCDC38-201ENST00000344280 FFAR4Q5NUL3 377 aa17.74■□□□□ 0.43
CCDC38-201ENST00000344280 TRAT1Q6PIZ9 186 aa17.74■□□□□ 0.43
CCDC38-201ENST00000344280 EDARADDQ8WWZ3 215 aa17.74■□□□□ 0.43
CCDC38-201ENST00000344280 AP4M1O00189 453 aa17.73■□□□□ 0.43
CCDC38-201ENST00000344280 CRYAAP02489 173 aa17.73■□□□□ 0.43
CCDC38-201ENST00000344280 CFHR2P36980 270 aa17.73■□□□□ 0.43
CCDC38-201ENST00000344280 KLF3P57682 345 aaPredicted RBP17.73■□□□□ 0.43
CCDC38-201ENST00000344280 NCMAPQ5T1S8 102 aa17.73■□□□□ 0.43
CCDC38-201ENST00000344280 IGFL3Q6UXB1 125 aa17.73■□□□□ 0.43
CCDC38-201ENST00000344280 OR10G9Q8NGN4 311 aa17.73■□□□□ 0.43
CCDC38-201ENST00000344280 OR10G7Q8NGN6 311 aa17.73■□□□□ 0.43
CCDC38-201ENST00000344280 CIB3Q96Q77 187 aaPredicted RBP17.73■□□□□ 0.43
CCDC38-201ENST00000344280 SSX3Q99909 188 aa17.73■□□□□ 0.43
CCDC38-201ENST00000344280 IFI27L2Q9H2X8 130 aa17.73■□□□□ 0.43
CCDC38-201ENST00000344280 SDF2L1Q9HCN8 221 aa17.73■□□□□ 0.43
CCDC38-201ENST00000344280 SIRT7Q9NRC8 400 aa17.73■□□□□ 0.43
CCDC38-201ENST00000344280 JPT1Q9UK76 154 aa17.73■□□□□ 0.43
CCDC38-201ENST00000344280 DCHS1Q96JQ0 3298 aa17.73■□□□□ 0.43
CCDC38-201ENST00000344280 LHBP01229 141 aa17.73■□□□□ 0.43
CCDC38-201ENST00000344280 WDR25Q64LD2 544 aaPredicted RBP17.73■□□□□ 0.43
CCDC38-201ENST00000344280 NANPQ8TBE9 248 aa17.73■□□□□ 0.43
CCDC38-201ENST00000344280 P2RX4Q99571 388 aa17.73■□□□□ 0.43
CCDC38-201ENST00000344280 ANKRD11Q6UB99 2663 aaPredicted RBP17.72■□□□□ 0.43
CCDC38-201ENST00000344280 TRAV3A0A0B4J244 114 aa17.72■□□□□ 0.43
CCDC38-201ENST00000344280 CXorf65A6NEN9 183 aa17.72■□□□□ 0.43
CCDC38-201ENST00000344280 GLRXP35754 106 aa17.72■□□□□ 0.43
CCDC38-201ENST00000344280 ZNF674Q2M3X9 581 aa17.72■□□□□ 0.43
CCDC38-201ENST00000344280 VWC2Q2TAL6 325 aa17.72■□□□□ 0.43
CCDC38-201ENST00000344280 CR1LQ2VPA4 569 aa17.72■□□□□ 0.43
CCDC38-201ENST00000344280 SEBOXQ9HB31 216 aaPredicted RBP17.72■□□□□ 0.43
CCDC38-201ENST00000344280 OR6C3Q9NZP0 311 aa17.72■□□□□ 0.43
CCDC38-201ENST00000344280 SPTBN2O15020 2390 aa17.72■□□□□ 0.43
CCDC38-201ENST00000344280 CYB5BO43169 146 aa17.72■□□□□ 0.43
CCDC38-201ENST00000344280 YPEL1O60688 119 aa17.72■□□□□ 0.43
CCDC38-201ENST00000344280 MDKP21741 143 aaPredicted RBP17.72■□□□□ 0.43
CCDC38-201ENST00000344280 Q6ZS92 163 aa17.72■□□□□ 0.43
CCDC38-201ENST00000344280 Q8N7P7 452 aa17.72■□□□□ 0.43
CCDC38-201ENST00000344280 YPEL2Q96QA6 119 aa17.72■□□□□ 0.43
CCDC38-201ENST00000344280 TET2Q6N021 2002 aaPredicted RBP17.71■□□□□ 0.43
CCDC38-201ENST00000344280 MEF2BQ02080 365 aaPredicted RBP17.71■□□□□ 0.43
CCDC38-201ENST00000344280 FAM27E3Q08E93 113 aa17.71■□□□□ 0.43
CCDC38-201ENST00000344280 KIAA0141Q14154 515 aaPredicted RBP17.71■□□□□ 0.43
CCDC38-201ENST00000344280 ROS1P08922 2347 aa17.71■□□□□ 0.43
CCDC38-201ENST00000344280 CTXND1A0A1B0GTU2 59 aa17.7■□□□□ 0.42
CCDC38-201ENST00000344280 F2RL2O00254 374 aa17.7■□□□□ 0.42
CCDC38-201ENST00000344280 CLN5O75503 358 aa17.7■□□□□ 0.42
CCDC38-201ENST00000344280 HPRT1P00492 218 aa17.7■□□□□ 0.42
CCDC38-201ENST00000344280 GNB2P62879 340 aa17.7■□□□□ 0.42
CCDC38-201ENST00000344280 RBMXL3Q8N7X1 1067 aaKnown RBP17.7■□□□□ 0.42
CCDC38-201ENST00000344280 RAB24Q969Q5 203 aa17.7■□□□□ 0.42
CCDC38-201ENST00000344280 CALYQ9NYX4 217 aa17.7■□□□□ 0.42
CCDC38-201ENST00000344280 B4DEV8 164 aa17.7■□□□□ 0.42
CCDC38-201ENST00000344280 IFNA1P01562 189 aa17.7■□□□□ 0.42
CCDC38-201ENST00000344280 GCSAMLQ5JQS6 135 aa17.7■□□□□ 0.42
CCDC38-201ENST00000344280 C1orf185Q5T7R7 199 aa17.7■□□□□ 0.42
CCDC38-201ENST00000344280 PRAMEF5Q5TYX0 476 aa17.7■□□□□ 0.42
CCDC38-201ENST00000344280 DMXL2Q8TDJ6 3036 aa17.7■□□□□ 0.42
CCDC38-201ENST00000344280 ADGRG4Q8IZF6 3080 aa17.69■□□□□ 0.42
CCDC38-201ENST00000344280 IGLV3-9A0A075B6K5 115 aa17.69■□□□□ 0.42
CCDC38-201ENST00000344280 YIF1AO95070 293 aa17.69■□□□□ 0.42
CCDC38-201ENST00000344280 CYB5R3P00387 301 aaPredicted RBP17.69■□□□□ 0.42
CCDC38-201ENST00000344280 S100A8P05109 93 aa17.69■□□□□ 0.42
CCDC38-201ENST00000344280 PNRC1Q12796 327 aaPredicted RBP17.69■□□□□ 0.42
CCDC38-201ENST00000344280 C17orf58Q2M2W7 97 aa17.69■□□□□ 0.42
CCDC38-201ENST00000344280 TGIF2LYQ8IUE0 185 aa17.69■□□□□ 0.42
CCDC38-201ENST00000344280 PPP1R35Q8TAP8 253 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms