RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 NUP43Q8NFH3 380 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 HOXD9P28356 352 aaPredicted RBP3.26□□□□□ -1.89
SYNE2-202ENST00000344113 TIAL1Q01085 375 aaKnown RBP eCLIP3.26□□□□□ -1.89
SYNE2-202ENST00000344113 ZNF585BQ52M93 769 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 LHX8Q68G74 356 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 KIR3DL3Q8N743 410 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 CST5P28325 142 aaPredicted RBP3.26□□□□□ -1.89
SYNE2-202ENST00000344113 OPRM1P35372 400 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 PSG9Q00887 426 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 DIO2Q92813 273 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 FAM181BA6NEQ2 426 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 CCL25O15444 150 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 NR0B2Q15466 257 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 UNQ5815/PRO19632Q6UWF5 114 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 AMTNQ6UX39 209 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 CT55Q8WUE5 264 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 FZD8Q9H461 694 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 A0A0A6YYC8 382 aaPredicted RBP3.25□□□□□ -1.89
SYNE2-202ENST00000344113 NPIPB13A6NJU9 1138 aa3.25□□□□□ -1.89
SYNE2-202ENST00000344113 NPIPB4C9JG80 1138 aa3.25□□□□□ -1.89
SYNE2-202ENST00000344113 NPIPB6E9PJ23 425 aa3.25□□□□□ -1.89
SYNE2-202ENST00000344113 I3L1I5 382 aaPredicted RBP3.25□□□□□ -1.89
SYNE2-202ENST00000344113 ELAVL3Q14576 367 aaKnown RBP3.25□□□□□ -1.89
SYNE2-202ENST00000344113 PRSS36Q5K4E3 855 aa3.25□□□□□ -1.89
SYNE2-202ENST00000344113 FBXL14Q8N1E6 418 aa3.25□□□□□ -1.89
SYNE2-202ENST00000344113 ABHD14AQ9BUJ0 271 aa3.25□□□□□ -1.89
SYNE2-202ENST00000344113 DUOX1Q9NRD9 1551 aa3.25□□□□□ -1.89
SYNE2-202ENST00000344113 CFHP08603 1231 aa3.25□□□□□ -1.89
SYNE2-202ENST00000344113 RPS4XP62701 263 aaKnown RBP3.25□□□□□ -1.89
SYNE2-202ENST00000344113 GLIPR1L1Q6UWM5 242 aa3.25□□□□□ -1.89
SYNE2-202ENST00000344113 CKS2P33552 79 aa3.25□□□□□ -1.89
SYNE2-202ENST00000344113 CLDND1Q9NY35 253 aa3.25□□□□□ -1.89
SYNE2-202ENST00000344113 RAXQ9Y2V3 346 aa3.25□□□□□ -1.89
SYNE2-202ENST00000344113 TRPM6Q9BX84 2022 aa3.25□□□□□ -1.89
SYNE2-202ENST00000344113 KNCNA6PVL3 124 aa3.25□□□□□ -1.89
SYNE2-202ENST00000344113 HGFACQ04756 655 aa3.25□□□□□ -1.89
SYNE2-202ENST00000344113 ZNF141Q15928 474 aa3.25□□□□□ -1.89
SYNE2-202ENST00000344113 CDCP2Q5VXM1 449 aa3.25□□□□□ -1.89
SYNE2-202ENST00000344113 DUX4L9Q6RFH8 374 aaPredicted RBP3.25□□□□□ -1.89
SYNE2-202ENST00000344113 HSD17B10Q99714 261 aaKnown RBP3.25□□□□□ -1.89
SYNE2-202ENST00000344113 ZNF219Q9P2Y4 722 aaPredicted RBP3.25□□□□□ -1.89
SYNE2-202ENST00000344113 H3BMG7 143 aa3.25□□□□□ -1.89
SYNE2-202ENST00000344113 PAPPAQ13219 1627 aa3.25□□□□□ -1.89
SYNE2-202ENST00000344113 M0R2P5 195 aa3.25□□□□□ -1.89
SYNE2-202ENST00000344113 RNF182Q8N6D2 247 aa3.25□□□□□ -1.89
SYNE2-202ENST00000344113 C8orf44Q96CB5 159 aa3.25□□□□□ -1.89
SYNE2-202ENST00000344113 KLHDC7BQ96G42 594 aa3.25□□□□□ -1.89
SYNE2-202ENST00000344113 IP6K3Q96PC2 410 aa3.25□□□□□ -1.89
SYNE2-202ENST00000344113 GGTLC3B5MD39 225 aa3.25□□□□□ -1.89
SYNE2-202ENST00000344113 FAM72CH0Y354 149 aa3.25□□□□□ -1.89
SYNE2-202ENST00000344113 EIF4EBP3O60516 100 aaPredicted RBP3.25□□□□□ -1.89
SYNE2-202ENST00000344113 FAM72DQ6L9T8 149 aa3.25□□□□□ -1.89
SYNE2-202ENST00000344113 AMN1Q8IY45 258 aa3.25□□□□□ -1.89
SYNE2-202ENST00000344113 FNDC10F2Z333 226 aa3.25□□□□□ -1.89
SYNE2-202ENST00000344113 EDN1P05305 212 aa3.25□□□□□ -1.89
SYNE2-202ENST00000344113 KLK2P20151 261 aa3.25□□□□□ -1.89
SYNE2-202ENST00000344113 CNTFRP26992 372 aa3.25□□□□□ -1.89
SYNE2-202ENST00000344113 FUT6P51993 359 aa3.25□□□□□ -1.89
SYNE2-202ENST00000344113 C1orf220Q5T0J3 134 aa3.25□□□□□ -1.89
SYNE2-202ENST00000344113 PLA2G12AQ9BZM1 189 aa3.25□□□□□ -1.89
SYNE2-202ENST00000344113 MEIG1Q5JSS6 88 aa3.25□□□□□ -1.89
SYNE2-202ENST00000344113 GPX1P07203 203 aa3.25□□□□□ -1.89
SYNE2-202ENST00000344113 CRYBA4P53673 196 aa3.25□□□□□ -1.89
SYNE2-202ENST00000344113 TMEM30BQ3MIR4 351 aa3.25□□□□□ -1.89
SYNE2-202ENST00000344113 KIRREL2Q6UWL6 708 aa3.25□□□□□ -1.89
SYNE2-202ENST00000344113 WNT1P04628 370 aa3.25□□□□□ -1.89
SYNE2-202ENST00000344113 BAHD1Q8TBE0 780 aaPredicted RBP3.25□□□□□ -1.89
SYNE2-202ENST00000344113 PELI1Q96FA3 418 aa3.25□□□□□ -1.89
SYNE2-202ENST00000344113 TNFRSF19Q9NS68 423 aa3.25□□□□□ -1.89
SYNE2-202ENST00000344113 HIGD1BQ9P298 99 aa3.25□□□□□ -1.89
SYNE2-202ENST00000344113 SHISA7A6NL88 538 aa3.25□□□□□ -1.89
SYNE2-202ENST00000344113 WNT2P09544 360 aa3.25□□□□□ -1.89
SYNE2-202ENST00000344113 APRG1Q8IVJ8 170 aa3.25□□□□□ -1.89
SYNE2-202ENST00000344113 WDYHV1Q96HA8 205 aa3.25□□□□□ -1.89
SYNE2-202ENST00000344113 HLA-DRB4P13762 266 aa3.25□□□□□ -1.89
SYNE2-202ENST00000344113 PKDCCQ504Y2 493 aa3.25□□□□□ -1.89
SYNE2-202ENST00000344113 ATP5EP2Q5VTU8 51 aa3.25□□□□□ -1.89
SYNE2-202ENST00000344113 PLPP7Q8NBV4 271 aa3.25□□□□□ -1.89
SYNE2-202ENST00000344113 TMEM171Q8WVE6 324 aa3.25□□□□□ -1.89
SYNE2-202ENST00000344113 SH3BGRL3Q9H299 93 aa3.25□□□□□ -1.89
SYNE2-202ENST00000344113 HLA-DRB4X5D2U9 266 aa3.25□□□□□ -1.89
SYNE2-202ENST00000344113 UBR1Q8IWV7 1749 aa3.25□□□□□ -1.89
SYNE2-202ENST00000344113 TP53BP1Q12888 1972 aaPredicted RBP3.25□□□□□ -1.89
SYNE2-202ENST00000344113 IGHV1-24A0A0C4DH33 117 aa3.25□□□□□ -1.89
SYNE2-202ENST00000344113 PPIAL4DF5H284 164 aa3.25□□□□□ -1.89
SYNE2-202ENST00000344113 GAS1P54826 345 aa3.25□□□□□ -1.89
SYNE2-202ENST00000344113 C1orf100Q5SVJ3 147 aa3.25□□□□□ -1.89
SYNE2-202ENST00000344113 IBA57Q5T440 356 aaKnown RBP3.25□□□□□ -1.89
SYNE2-202ENST00000344113 PXMP4Q9Y6I8 212 aa3.25□□□□□ -1.89
SYNE2-202ENST00000344113 TAX1BP3O14907 124 aa3.25□□□□□ -1.89
SYNE2-202ENST00000344113 SRIP30626 198 aa3.25□□□□□ -1.89
SYNE2-202ENST00000344113 ACVRL1P37023 503 aa3.25□□□□□ -1.89
SYNE2-202ENST00000344113 DCAF12Q5T6F0 453 aa3.25□□□□□ -1.89
SYNE2-202ENST00000344113 PHLDA1Q8WV24 401 aaPredicted RBP3.25□□□□□ -1.89
SYNE2-202ENST00000344113 HYPMO75409 117 aa3.25□□□□□ -1.89
SYNE2-202ENST00000344113 SPEM2Q0P670 501 aa3.25□□□□□ -1.89
SYNE2-202ENST00000344113 OR1B1Q8NGR6 318 aa3.25□□□□□ -1.89
SYNE2-202ENST00000344113 CLEC1BQ9P126 229 aa3.25□□□□□ -1.89
SYNE2-202ENST00000344113 NKX2-2O95096 273 aa3.25□□□□□ -1.89
SYNE2-202ENST00000344113 Q71RC1 249 aaPredicted RBP3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 358.3 ms