RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 LIPT2A6NK58 231 aa6.1□□□□□ -1.43
ZNF540-202ENST00000343599 TNFRSF13BO14836 293 aaPredicted RBP6.1□□□□□ -1.43
ZNF540-202ENST00000343599 RBFOX2O43251 390 aaKnown RBP eCLIP6.1□□□□□ -1.43
ZNF540-202ENST00000343599 OR7C2O60412 319 aa6.1□□□□□ -1.43
ZNF540-202ENST00000343599 LDB3O75112 727 aa6.1□□□□□ -1.43
ZNF540-202ENST00000343599 TOX4O94842 621 aa6.1□□□□□ -1.43
ZNF540-202ENST00000343599 NANOS3P60323 173 aaKnown RBP6.1□□□□□ -1.43
ZNF540-202ENST00000343599 PCK2Q16822 640 aa6.1□□□□□ -1.43
ZNF540-202ENST00000343599 MPV17LQ2QL34 196 aa6.1□□□□□ -1.43
ZNF540-202ENST00000343599 LRRC10Q5BKY1 277 aa6.1□□□□□ -1.43
ZNF540-202ENST00000343599 Q6ZN92 141 aa6.1□□□□□ -1.43
ZNF540-202ENST00000343599 C16orf82Q7Z2V1 217 aa6.1□□□□□ -1.43
ZNF540-202ENST00000343599 CALHM1Q8IU99 346 aa6.1□□□□□ -1.43
ZNF540-202ENST00000343599 ASB10Q8WXI3 467 aa6.1□□□□□ -1.43
ZNF540-202ENST00000343599 TMEM230Q96A57 120 aa6.1□□□□□ -1.43
ZNF540-202ENST00000343599 OXGR1Q96P68 337 aa6.1□□□□□ -1.43
ZNF540-202ENST00000343599 WNT10AQ9GZT5 417 aa6.1□□□□□ -1.43
ZNF540-202ENST00000343599 SH3BGRL3Q9H299 93 aa6.1□□□□□ -1.43
ZNF540-202ENST00000343599 FBLN5Q9UBX5 448 aa6.1□□□□□ -1.43
ZNF540-202ENST00000343599 LAMP3Q9UQV4 416 aa6.1□□□□□ -1.43
ZNF540-202ENST00000343599 IGHV2-26A0A0B4J1V2 119 aa6.1□□□□□ -1.43
ZNF540-202ENST00000343599 FAM90A18PA6NE21 464 aa6.1□□□□□ -1.43
ZNF540-202ENST00000343599 FAM90A16PA6NEW6 464 aa6.1□□□□□ -1.43
ZNF540-202ENST00000343599 FAM90A9PA6NNJ1 464 aa6.1□□□□□ -1.43
ZNF540-202ENST00000343599 FAM90A5PA8MXJ8 464 aa6.1□□□□□ -1.43
ZNF540-202ENST00000343599 J3QR06 171 aa6.1□□□□□ -1.43
ZNF540-202ENST00000343599 THY1P04216 161 aa6.1□□□□□ -1.43
ZNF540-202ENST00000343599 FAM90A15PP0C7V4 464 aa6.1□□□□□ -1.43
ZNF540-202ENST00000343599 FAM90A14PP0C7W9 464 aa6.1□□□□□ -1.43
ZNF540-202ENST00000343599 MFAP4P55083 255 aa6.1□□□□□ -1.43
ZNF540-202ENST00000343599 TIRAPP58753 221 aa6.1□□□□□ -1.43
ZNF540-202ENST00000343599 TAS2R30P59541 319 aa6.1□□□□□ -1.43
ZNF540-202ENST00000343599 FAM27E3Q08E93 113 aa6.1□□□□□ -1.43
ZNF540-202ENST00000343599 ZNF684Q5T5D7 378 aa6.1□□□□□ -1.43
ZNF540-202ENST00000343599 C9orf135Q5VTT2 229 aa6.1□□□□□ -1.43
ZNF540-202ENST00000343599 LINC00114Q6XXX2 140 aa6.1□□□□□ -1.43
ZNF540-202ENST00000343599 SLC35F2Q8IXU6 374 aa6.1□□□□□ -1.43
ZNF540-202ENST00000343599 SAXO1Q8IYX7 474 aa6.1□□□□□ -1.43
ZNF540-202ENST00000343599 OR5B3Q8NH48 314 aa6.1□□□□□ -1.43
ZNF540-202ENST00000343599 TMEM37Q8WXS4 190 aa6.1□□□□□ -1.43
ZNF540-202ENST00000343599 IL22RA2Q969J5 263 aa6.1□□□□□ -1.43
ZNF540-202ENST00000343599 FAM3DQ96BQ1 224 aa6.1□□□□□ -1.43
ZNF540-202ENST00000343599 RBMXL1Q96E39 390 aaKnown RBP6.1□□□□□ -1.43
ZNF540-202ENST00000343599 MACROD1Q9BQ69 325 aa6.1□□□□□ -1.43
ZNF540-202ENST00000343599 ABHD6Q9BV23 337 aa6.1□□□□□ -1.43
ZNF540-202ENST00000343599 SIRT3Q9NTG7 399 aaPredicted RBP6.1□□□□□ -1.43
ZNF540-202ENST00000343599 PRSS50Q9UI38 385 aa6.1□□□□□ -1.43
ZNF540-202ENST00000343599 HEATR5AQ86XA9 2040 aa6.09□□□□□ -1.43
ZNF540-202ENST00000343599 TRAV8-7A0A075B6U6 113 aa6.09□□□□□ -1.43
ZNF540-202ENST00000343599 TRAV26-1A0A087WT03 109 aa6.09□□□□□ -1.43
ZNF540-202ENST00000343599 RIIAD1A6NNX1 92 aa6.09□□□□□ -1.43
ZNF540-202ENST00000343599 SRRM5B3KS81 715 aa6.09□□□□□ -1.43
ZNF540-202ENST00000343599 TRAPPC2LH3BP13 241 aa6.09□□□□□ -1.43
ZNF540-202ENST00000343599 J3QL48 77 aa6.09□□□□□ -1.43
ZNF540-202ENST00000343599 NUPR1O60356 82 aa6.09□□□□□ -1.43
ZNF540-202ENST00000343599 GABRA3P34903 492 aa6.09□□□□□ -1.43
ZNF540-202ENST00000343599 TPPP2P59282 170 aa6.09□□□□□ -1.43
ZNF540-202ENST00000343599 SRPXP78539 464 aa6.09□□□□□ -1.43
ZNF540-202ENST00000343599 EXOSC7Q15024 291 aaKnown RBP6.09□□□□□ -1.43
ZNF540-202ENST00000343599 ANKRD55Q3KP44 614 aa6.09□□□□□ -1.43
ZNF540-202ENST00000343599 TMEM256Q8N2U0 113 aa6.09□□□□□ -1.43
ZNF540-202ENST00000343599 Q8N976 141 aa6.09□□□□□ -1.43
ZNF540-202ENST00000343599 OR4F5Q8NH21 305 aa6.09□□□□□ -1.43
ZNF540-202ENST00000343599 GLIPR2Q9H4G4 154 aa6.09□□□□□ -1.43
ZNF540-202ENST00000343599 Q9N2K0 584 aa6.09□□□□□ -1.43
ZNF540-202ENST00000343599 TMEM140Q9NV12 185 aa6.09□□□□□ -1.43
ZNF540-202ENST00000343599 GOLGA4Q13439 2230 aaKnown RBP6.09□□□□□ -1.43
ZNF540-202ENST00000343599 A0A1W2PRX2 142 aa6.09□□□□□ -1.44
ZNF540-202ENST00000343599 CPSF4LA6NMK7 179 aaKnown RBP6.09□□□□□ -1.44
ZNF540-202ENST00000343599 SLC17A2O00624 439 aa6.09□□□□□ -1.44
ZNF540-202ENST00000343599 ZNF43P17038 809 aa6.09□□□□□ -1.44
ZNF540-202ENST00000343599 CD33P20138 364 aa6.09□□□□□ -1.44
ZNF540-202ENST00000343599 TSPOP30536 169 aa6.09□□□□□ -1.44
ZNF540-202ENST00000343599 CFHR2P36980 270 aa6.09□□□□□ -1.44
ZNF540-202ENST00000343599 CEBPDP49716 269 aaPredicted RBP6.09□□□□□ -1.44
ZNF540-202ENST00000343599 SUPT4H1P63272 117 aaKnown RBP6.09□□□□□ -1.44
ZNF540-202ENST00000343599 TSTA3Q13630 321 aaPredicted RBP6.09□□□□□ -1.44
ZNF540-202ENST00000343599 SPATA45Q537H7 98 aa6.09□□□□□ -1.44
ZNF540-202ENST00000343599 MRPL21Q7Z2W9 205 aaKnown RBP6.09□□□□□ -1.44
ZNF540-202ENST00000343599 CIARTQ8N365 385 aaPredicted RBP6.09□□□□□ -1.44
ZNF540-202ENST00000343599 TMEM255BQ8WV15 326 aa6.09□□□□□ -1.44
ZNF540-202ENST00000343599 OR7D2Q96RA2 312 aa6.09□□□□□ -1.44
ZNF540-202ENST00000343599 SMIM3Q9BZL3 60 aa6.09□□□□□ -1.44
ZNF540-202ENST00000343599 KAAG1Q9UBP8 84 aa6.09□□□□□ -1.44
ZNF540-202ENST00000343599 RHBDD3Q9Y3P4 386 aa6.09□□□□□ -1.44
ZNF540-202ENST00000343599 RFNGQ9Y644 331 aa6.09□□□□□ -1.44
ZNF540-202ENST00000343599 MAST4O15021 2626 aa6.09□□□□□ -1.44
ZNF540-202ENST00000343599 USP9XQ93008 2570 aaPredicted RBP6.09□□□□□ -1.44
ZNF540-202ENST00000343599 LOC102723971A0A1B0GUV8 181 aa6.08□□□□□ -1.44
ZNF540-202ENST00000343599 OR6C6A6NF89 314 aa6.08□□□□□ -1.44
ZNF540-202ENST00000343599 SAP30O75446 220 aa6.08□□□□□ -1.44
ZNF540-202ENST00000343599 ABHD16AO95870 558 aa6.08□□□□□ -1.44
ZNF540-202ENST00000343599 NGFP01138 241 aa6.08□□□□□ -1.44
ZNF540-202ENST00000343599 CCNOP22674 350 aa6.08□□□□□ -1.44
ZNF540-202ENST00000343599 HINT1P49773 126 aaPredicted RBP6.08□□□□□ -1.44
ZNF540-202ENST00000343599 RAB9AP51151 201 aa6.08□□□□□ -1.44
ZNF540-202ENST00000343599 LMO4P61968 165 aa6.08□□□□□ -1.44
ZNF540-202ENST00000343599 GPR157Q5UAW9 335 aa6.08□□□□□ -1.44
ZNF540-202ENST00000343599 WBP2NLQ6ICG8 309 aa6.08□□□□□ -1.44
ZNF540-202ENST00000343599 DPPA3Q6W0C5 159 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms