RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 OR5AL1P0C617 328 aa6.9□□□□□ -1.31
UBE4B-202ENST00000343090 RPL31P62899 125 aaKnown RBP6.9□□□□□ -1.31
UBE4B-202ENST00000343090 GABRA6Q16445 453 aa6.9□□□□□ -1.31
UBE4B-202ENST00000343090 PET117Q6UWS5 81 aa6.9□□□□□ -1.31
UBE4B-202ENST00000343090 VKORC1L1Q8N0U8 176 aa6.9□□□□□ -1.31
UBE4B-202ENST00000343090 VSTM2AQ8TAG5 236 aa6.9□□□□□ -1.31
UBE4B-202ENST00000343090 P2RX4Q99571 388 aa6.9□□□□□ -1.31
UBE4B-202ENST00000343090 PARLQ9H300 379 aa6.9□□□□□ -1.31
UBE4B-202ENST00000343090 TUBD1Q9UJT1 453 aa6.9□□□□□ -1.31
UBE4B-202ENST00000343090 PXMP4Q9Y6I8 212 aa6.9□□□□□ -1.31
UBE4B-202ENST00000343090 DOCK4Q8N1I0 1966 aa6.9□□□□□ -1.31
UBE4B-202ENST00000343090 A8MWP6 167 aa6.89□□□□□ -1.31
UBE4B-202ENST00000343090 C9JQL5 133 aa6.89□□□□□ -1.31
UBE4B-202ENST00000343090 J3KRW8 73 aa6.89□□□□□ -1.31
UBE4B-202ENST00000343090 PLAUP00749 431 aa6.89□□□□□ -1.31
UBE4B-202ENST00000343090 TDGF1P3P51864 188 aa6.89□□□□□ -1.31
UBE4B-202ENST00000343090 ZNF137PP52743 207 aa6.89□□□□□ -1.31
UBE4B-202ENST00000343090 HIST3H3Q16695 136 aa6.89□□□□□ -1.31
UBE4B-202ENST00000343090 DMRTC2Q8IXT2 367 aaPredicted RBP6.89□□□□□ -1.31
UBE4B-202ENST00000343090 ITLN1Q8WWA0 313 aa6.89□□□□□ -1.31
UBE4B-202ENST00000343090 TNFRSF19Q9NS68 423 aa6.89□□□□□ -1.31
UBE4B-202ENST00000343090 SLC25A10Q9UBX3 287 aaPredicted RBP6.89□□□□□ -1.31
UBE4B-202ENST00000343090 GAGE10A6NGK3 116 aa6.89□□□□□ -1.31
UBE4B-202ENST00000343090 BMPR1BO00238 502 aa6.89□□□□□ -1.31
UBE4B-202ENST00000343090 ZG16O60844 167 aa6.89□□□□□ -1.31
UBE4B-202ENST00000343090 LTBRP36941 435 aa6.89□□□□□ -1.31
UBE4B-202ENST00000343090 RTP5Q14D33 572 aa6.89□□□□□ -1.31
UBE4B-202ENST00000343090 MIC13Q5XKP0 118 aa6.89□□□□□ -1.31
UBE4B-202ENST00000343090 NHLRC2Q8NBF2 726 aa6.89□□□□□ -1.31
UBE4B-202ENST00000343090 SMIM12Q96EX1 92 aa6.89□□□□□ -1.31
UBE4B-202ENST00000343090 SDK2Q58EX2 2172 aa6.89□□□□□ -1.31
UBE4B-202ENST00000343090 MELTFP08582 738 aa6.89□□□□□ -1.31
UBE4B-202ENST00000343090 MST1LQ2TV78 715 aa6.89□□□□□ -1.31
UBE4B-202ENST00000343090 ERASQ7Z444 233 aa6.89□□□□□ -1.31
UBE4B-202ENST00000343090 ZNF645Q8N7E2 425 aa6.89□□□□□ -1.31
UBE4B-202ENST00000343090 INSIG2Q9Y5U4 225 aa6.89□□□□□ -1.31
UBE4B-202ENST00000343090 SERF2P84101 59 aa6.89□□□□□ -1.31
UBE4B-202ENST00000343090 CDPF1Q6NVV7 123 aa6.89□□□□□ -1.31
UBE4B-202ENST00000343090 TAF15Q92804 592 aaKnown RBP eCLIP6.89□□□□□ -1.31
UBE4B-202ENST00000343090 MRPL18Q9H0U6 180 aaKnown RBP6.89□□□□□ -1.31
UBE4B-202ENST00000343090 YTHDF2Q9Y5A9 579 aaKnown RBP6.89□□□□□ -1.31
UBE4B-202ENST00000343090 TMSB15BA0A087X1C1 80 aa6.88□□□□□ -1.31
UBE4B-202ENST00000343090 S1PR2O95136 353 aa6.88□□□□□ -1.31
UBE4B-202ENST00000343090 GOSR1O95249 250 aa6.88□□□□□ -1.31
UBE4B-202ENST00000343090 CCL20P78556 96 aa6.88□□□□□ -1.31
UBE4B-202ENST00000343090 ICAM4Q14773 271 aa6.88□□□□□ -1.31
UBE4B-202ENST00000343090 C10orf91Q5T1B1 145 aa6.88□□□□□ -1.31
UBE4B-202ENST00000343090 C10orf128Q5T292 105 aa6.88□□□□□ -1.31
UBE4B-202ENST00000343090 PPP1R32Q7Z5V6 425 aa6.88□□□□□ -1.31
UBE4B-202ENST00000343090 RNF2Q99496 336 aa6.88□□□□□ -1.31
UBE4B-202ENST00000343090 RTBDNQ9BSG5 229 aaPredicted RBP6.88□□□□□ -1.31
UBE4B-202ENST00000343090 CLDN16Q9Y5I7 305 aa6.88□□□□□ -1.31
UBE4B-202ENST00000343090 SCN5AQ14524 2016 aa6.88□□□□□ -1.31
UBE4B-202ENST00000343090 GBF1Q92538 1859 aa6.88□□□□□ -1.31
UBE4B-202ENST00000343090 C16orf97H3BN30 126 aa6.88□□□□□ -1.31
UBE4B-202ENST00000343090 P01737 135 aa6.88□□□□□ -1.31
UBE4B-202ENST00000343090 VWA1Q6PCB0 445 aa6.88□□□□□ -1.31
UBE4B-202ENST00000343090 ST6GALNAC3Q8NDV1 305 aa6.88□□□□□ -1.31
UBE4B-202ENST00000343090 SIGLEC12Q96PQ1 595 aa6.88□□□□□ -1.31
UBE4B-202ENST00000343090 IGKV3-7A0A075B6H7 116 aa6.88□□□□□ -1.31
UBE4B-202ENST00000343090 WNT9BO14905 357 aa6.88□□□□□ -1.31
UBE4B-202ENST00000343090 GNG7O60262 68 aa6.88□□□□□ -1.31
UBE4B-202ENST00000343090 COL8A1P27658 744 aa6.88□□□□□ -1.31
UBE4B-202ENST00000343090 MPV17P39210 176 aa6.88□□□□□ -1.31
UBE4B-202ENST00000343090 DNLZQ5SXM8 178 aa6.88□□□□□ -1.31
UBE4B-202ENST00000343090 CALHM1Q8IU99 346 aa6.88□□□□□ -1.31
UBE4B-202ENST00000343090 OR10S1Q8NGN2 331 aa6.88□□□□□ -1.31
UBE4B-202ENST00000343090 OR1L8Q8NGR8 309 aa6.88□□□□□ -1.31
UBE4B-202ENST00000343090 CLDND2Q8NHS1 167 aa6.88□□□□□ -1.31
UBE4B-202ENST00000343090 KLF14Q8TD94 323 aaPredicted RBP6.88□□□□□ -1.31
UBE4B-202ENST00000343090 FAM222BQ8WU58 562 aa6.88□□□□□ -1.31
UBE4B-202ENST00000343090 AMMECR1Q9Y4X0 333 aaPredicted RBP6.88□□□□□ -1.31
UBE4B-202ENST00000343090 RTTNQ86VV8 2226 aa6.88□□□□□ -1.31
UBE4B-202ENST00000343090 MGST3O14880 152 aa6.88□□□□□ -1.31
UBE4B-202ENST00000343090 NPSP0C0P6 89 aa6.88□□□□□ -1.31
UBE4B-202ENST00000343090 GZMBP10144 247 aa6.88□□□□□ -1.31
UBE4B-202ENST00000343090 TCTAP57738 103 aa6.88□□□□□ -1.31
UBE4B-202ENST00000343090 PRDM14Q9GZV8 571 aa6.88□□□□□ -1.31
UBE4B-202ENST00000343090 TMEM191AQ9H0A3 160 aa6.88□□□□□ -1.31
UBE4B-202ENST00000343090 IL19Q9UHD0 177 aa6.88□□□□□ -1.31
UBE4B-202ENST00000343090 SPTA1P02549 2419 aa6.88□□□□□ -1.31
UBE4B-202ENST00000343090 ZDBF2Q9HCK1 2354 aa6.87□□□□□ -1.31
UBE4B-202ENST00000343090 IGSF23A1L1A6 192 aa6.87□□□□□ -1.31
UBE4B-202ENST00000343090 ATXN7O15265 892 aaPredicted RBP6.87□□□□□ -1.31
UBE4B-202ENST00000343090 EGR1P18146 543 aa6.87□□□□□ -1.31
UBE4B-202ENST00000343090 UCP3P55916 312 aa6.87□□□□□ -1.31
UBE4B-202ENST00000343090 RIPPLY2Q5TAB7 128 aa6.87□□□□□ -1.31
UBE4B-202ENST00000343090 RAB1CQ92928 201 aa6.87□□□□□ -1.31
UBE4B-202ENST00000343090 RASL11BQ9BPW5 248 aa6.87□□□□□ -1.31
UBE4B-202ENST00000343090 KLHDC3Q9BQ90 382 aa6.87□□□□□ -1.31
UBE4B-202ENST00000343090 SNHG12Q9BXW3 62 aa6.87□□□□□ -1.31
UBE4B-202ENST00000343090 RAB1BQ9H0U4 201 aa6.87□□□□□ -1.31
UBE4B-202ENST00000343090 LPAR2Q9HBW0 351 aa6.87□□□□□ -1.31
UBE4B-202ENST00000343090 SDF2L1Q9HCN8 221 aa6.87□□□□□ -1.31
UBE4B-202ENST00000343090 CACNA1EQ15878 2313 aa6.87□□□□□ -1.31
UBE4B-202ENST00000343090 MDC1Q14676 2089 aaKnown RBP6.87□□□□□ -1.31
UBE4B-202ENST00000343090 RHBDL1O75783 438 aa6.87□□□□□ -1.31
UBE4B-202ENST00000343090 KBTBD11O94819 623 aa6.87□□□□□ -1.31
UBE4B-202ENST00000343090 EFEMP2O95967 443 aa6.87□□□□□ -1.31
UBE4B-202ENST00000343090 ACP1P24666 158 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms