RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 K7EN84 100 aa8.09□□□□□ -1.11
HOXA1-201ENST00000343060 K7EP13 123 aa8.09□□□□□ -1.11
HOXA1-201ENST00000343060 OPRK1P41145 380 aa8.09□□□□□ -1.11
HOXA1-201ENST00000343060 MLF1P58340 268 aa8.09□□□□□ -1.11
HOXA1-201ENST00000343060 BRWD1-AS2P59051 145 aa8.09□□□□□ -1.11
HOXA1-201ENST00000343060 RPL30P62888 115 aaKnown RBP8.09□□□□□ -1.11
HOXA1-201ENST00000343060 HLA-BQ31612 363 aa8.09□□□□□ -1.11
HOXA1-201ENST00000343060 KRTCAP3Q53RY4 240 aa8.09□□□□□ -1.11
HOXA1-201ENST00000343060 GCSAMLQ5JQS6 135 aa8.09□□□□□ -1.11
HOXA1-201ENST00000343060 OR10J3Q5JRS4 329 aa8.09□□□□□ -1.11
HOXA1-201ENST00000343060 BAGE3Q86Y29 109 aa8.09□□□□□ -1.11
HOXA1-201ENST00000343060 BAGE2Q86Y30 109 aa8.09□□□□□ -1.11
HOXA1-201ENST00000343060 STPG4Q8N801 248 aa8.09□□□□□ -1.11
HOXA1-201ENST00000343060 OR2M7Q8NG81 312 aa8.09□□□□□ -1.11
HOXA1-201ENST00000343060 TMEM204Q9BSN7 226 aa8.09□□□□□ -1.11
HOXA1-201ENST00000343060 KCNIP1Q9NZI2 227 aa8.09□□□□□ -1.11
HOXA1-201ENST00000343060 DOCK11Q5JSL3 2073 aa8.09□□□□□ -1.11
HOXA1-201ENST00000343060 NCKAP5O14513 1909 aa8.09□□□□□ -1.11
HOXA1-201ENST00000343060 IGKV3D-15A0A087WSY6 115 aa8.08□□□□□ -1.12
HOXA1-201ENST00000343060 C5orf49A4QMS7 147 aa8.08□□□□□ -1.12
HOXA1-201ENST00000343060 HYPMO75409 117 aa8.08□□□□□ -1.12
HOXA1-201ENST00000343060 S1PR2O95136 353 aa8.08□□□□□ -1.12
HOXA1-201ENST00000343060 MT-ND6P03923 174 aa8.08□□□□□ -1.12
HOXA1-201ENST00000343060 GNG10P50151 68 aa8.08□□□□□ -1.12
HOXA1-201ENST00000343060 KLF3P57682 345 aaPredicted RBP8.08□□□□□ -1.12
HOXA1-201ENST00000343060 ARF1P84077 181 aaKnown RBP8.08□□□□□ -1.12
HOXA1-201ENST00000343060 MMDQ15546 238 aa8.08□□□□□ -1.12
HOXA1-201ENST00000343060 SPATA45Q537H7 98 aa8.08□□□□□ -1.12
HOXA1-201ENST00000343060 SAPCD1Q5SSQ6 148 aa8.08□□□□□ -1.12
HOXA1-201ENST00000343060 YRDCQ86U90 279 aaKnown RBP8.08□□□□□ -1.12
HOXA1-201ENST00000343060 SIGLECL1Q8N7X8 197 aa8.08□□□□□ -1.12
HOXA1-201ENST00000343060 KCNS1Q96KK3 526 aa8.08□□□□□ -1.12
HOXA1-201ENST00000343060 AKIRIN1Q9H9L7 192 aaPredicted RBP8.08□□□□□ -1.12
HOXA1-201ENST00000343060 GNB4Q9HAV0 340 aa8.08□□□□□ -1.12
HOXA1-201ENST00000343060 TRAPPC2LQ9UL33 140 aa8.08□□□□□ -1.12
HOXA1-201ENST00000343060 A0A0G2JMM0 328 aa8.08□□□□□ -1.12
HOXA1-201ENST00000343060 IGHV5-10-1A0A0J9YXX1 117 aa8.08□□□□□ -1.12
HOXA1-201ENST00000343060 A0A1W2PPB8 328 aa8.08□□□□□ -1.12
HOXA1-201ENST00000343060 A0A1W2PRS3 328 aa8.08□□□□□ -1.12
HOXA1-201ENST00000343060 NKX6-3A6NJ46 265 aa8.08□□□□□ -1.12
HOXA1-201ENST00000343060 KIR3DP1A8MWS1 328 aa8.08□□□□□ -1.12
HOXA1-201ENST00000343060 FCN1O00602 326 aa8.08□□□□□ -1.12
HOXA1-201ENST00000343060 OR2H2O95918 312 aa8.08□□□□□ -1.12
HOXA1-201ENST00000343060 CXorf1O96002 111 aa8.08□□□□□ -1.12
HOXA1-201ENST00000343060 OR5G3P0C626 314 aa8.08□□□□□ -1.12
HOXA1-201ENST00000343060 OR10J4P0C629 311 aa8.08□□□□□ -1.12
HOXA1-201ENST00000343060 ARL14EPLP0DKL9 152 aa8.08□□□□□ -1.12
HOXA1-201ENST00000343060 BMP5P22003 454 aa8.08□□□□□ -1.12
HOXA1-201ENST00000343060 ERVK11-1P61568 191 aa8.08□□□□□ -1.12
HOXA1-201ENST00000343060 TGFBR3Q03167 851 aa8.08□□□□□ -1.12
HOXA1-201ENST00000343060 CATR1Q13166 79 aa8.08□□□□□ -1.12
HOXA1-201ENST00000343060 HLA-DRB5Q30154 266 aa8.08□□□□□ -1.12
HOXA1-201ENST00000343060 DCAF12Q5T6F0 453 aa8.08□□□□□ -1.12
HOXA1-201ENST00000343060 POM121L2Q96KW2 1035 aa8.08□□□□□ -1.12
HOXA1-201ENST00000343060 PRRG4Q9BZD6 226 aa8.08□□□□□ -1.12
HOXA1-201ENST00000343060 LAMTOR2Q9Y2Q5 125 aa8.08□□□□□ -1.12
HOXA1-201ENST00000343060 TRGV10A0A0A0MS01 117 aa8.07□□□□□ -1.12
HOXA1-201ENST00000343060 A0A1W2PPV4 95 aa8.07□□□□□ -1.12
HOXA1-201ENST00000343060 C20orf202A1L168 122 aa8.07□□□□□ -1.12
HOXA1-201ENST00000343060 ANKRD30BLA7E2S9 258 aa8.07□□□□□ -1.12
HOXA1-201ENST00000343060 ZNF253O75346 499 aa8.07□□□□□ -1.12
HOXA1-201ENST00000343060 RHBDL1O75783 438 aa8.07□□□□□ -1.12
HOXA1-201ENST00000343060 SUMO1P63165 101 aaKnown RBP8.07□□□□□ -1.12
HOXA1-201ENST00000343060 COX19Q49B96 90 aa8.07□□□□□ -1.12
HOXA1-201ENST00000343060 MORN2Q502X0 79 aa8.07□□□□□ -1.12
HOXA1-201ENST00000343060 LEMD1Q68G75 181 aa8.07□□□□□ -1.12
HOXA1-201ENST00000343060 RPS19BP1Q86WX3 136 aaKnown RBP8.07□□□□□ -1.12
HOXA1-201ENST00000343060 WDR31Q8NA23 367 aa8.07□□□□□ -1.12
HOXA1-201ENST00000343060 RNASE8Q8TDE3 154 aaKnown RBP8.07□□□□□ -1.12
HOXA1-201ENST00000343060 ABHD3Q8WU67 409 aa8.07□□□□□ -1.12
HOXA1-201ENST00000343060 NRN1Q9NPD7 142 aa8.07□□□□□ -1.12
HOXA1-201ENST00000343060 TBL2Q9Y4P3 447 aaKnown RBP8.07□□□□□ -1.12
HOXA1-201ENST00000343060 V9GYV3 84 aa8.07□□□□□ -1.12
HOXA1-201ENST00000343060 CEP192Q8TEP8 1941 aa8.07□□□□□ -1.12
HOXA1-201ENST00000343060 A0A1W2PQM1 296 aa8.07□□□□□ -1.12
HOXA1-201ENST00000343060 ZNF503-AS2A6NEH8 195 aa8.07□□□□□ -1.12
HOXA1-201ENST00000343060 SNURFLB1AK76 121 aa8.07□□□□□ -1.12
HOXA1-201ENST00000343060 C2CD4DB7Z1M9 353 aa8.07□□□□□ -1.12
HOXA1-201ENST00000343060 RRHO14718 337 aa8.07□□□□□ -1.12
HOXA1-201ENST00000343060 CDIPTO14735 213 aa8.07□□□□□ -1.12
HOXA1-201ENST00000343060 CCL25O15444 150 aa8.07□□□□□ -1.12
HOXA1-201ENST00000343060 NEURL1O76050 574 aa8.07□□□□□ -1.12
HOXA1-201ENST00000343060 NGFP01138 241 aa8.07□□□□□ -1.12
HOXA1-201ENST00000343060 IER3P46695 156 aa8.07□□□□□ -1.12
HOXA1-201ENST00000343060 THBS3P49746 956 aa8.07□□□□□ -1.12
HOXA1-201ENST00000343060 TMPRSS3P57727 454 aa8.07□□□□□ -1.12
HOXA1-201ENST00000343060 ZNF816Q0VGE8 651 aaPredicted RBP8.07□□□□□ -1.12
HOXA1-201ENST00000343060 RPEL1Q2QD12 228 aa8.07□□□□□ -1.12
HOXA1-201ENST00000343060 CNTRLQ7Z7A1 2325 aa8.07□□□□□ -1.12
HOXA1-201ENST00000343060 Q8IYB0 196 aa8.07□□□□□ -1.12
HOXA1-201ENST00000343060 C22orf15Q8WYQ4 148 aa8.07□□□□□ -1.12
HOXA1-201ENST00000343060 STARD4Q96DR4 205 aa8.07□□□□□ -1.12
HOXA1-201ENST00000343060 TAAR6Q96RI8 345 aa8.07□□□□□ -1.12
HOXA1-201ENST00000343060 YTHDF2Q9Y5A9 579 aaKnown RBP8.07□□□□□ -1.12
HOXA1-201ENST00000343060 FAM166BA8MTA8 275 aa8.06□□□□□ -1.12
HOXA1-201ENST00000343060 C17orf98A8MV24 154 aa8.06□□□□□ -1.12
HOXA1-201ENST00000343060 PRSS46E5RG02 174 aa8.06□□□□□ -1.12
HOXA1-201ENST00000343060 C3orf80F5H4A9 247 aa8.06□□□□□ -1.12
HOXA1-201ENST00000343060 SLC17A3O00476 420 aa8.06□□□□□ -1.12
HOXA1-201ENST00000343060 TRAPPC6AO75865 159 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms