RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 BTF3P20290 206 aaKnown RBP12.83□□□□□ -0.36
UBE3B-202ENST00000342494 RAB9AP51151 201 aa12.83□□□□□ -0.36
UBE3B-202ENST00000342494 C10orf128Q5T292 105 aa12.83□□□□□ -0.36
UBE3B-202ENST00000342494 MIC13Q5XKP0 118 aa12.83□□□□□ -0.36
UBE3B-202ENST00000342494 RBM38Q9H0Z9 239 aaKnown RBP12.83□□□□□ -0.36
UBE3B-202ENST00000342494 BET1LQ9NYM9 111 aa12.83□□□□□ -0.36
UBE3B-202ENST00000342494 HSF4Q9ULV5 492 aa12.83□□□□□ -0.36
UBE3B-202ENST00000342494 IGKV1D-42A0A075B6H8 117 aa12.82□□□□□ -0.36
UBE3B-202ENST00000342494 IGHV3-35A0A0C4DH35 117 aa12.82□□□□□ -0.36
UBE3B-202ENST00000342494 CX3CL1P78423 397 aa12.82□□□□□ -0.36
UBE3B-202ENST00000342494 C1orf100Q5SVJ3 147 aa12.82□□□□□ -0.36
UBE3B-202ENST00000342494 STRCP1A6NGW2 1772 aa12.82□□□□□ -0.36
UBE3B-202ENST00000342494 PQLC2Q6ZP29 291 aa12.82□□□□□ -0.36
UBE3B-202ENST00000342494 KBTBD11O94819 623 aa12.82□□□□□ -0.36
UBE3B-202ENST00000342494 C7orf69Q9H7B7 122 aa12.82□□□□□ -0.36
UBE3B-202ENST00000342494 C7orf77A4D0Y5 90 aa12.82□□□□□ -0.36
UBE3B-202ENST00000342494 GPR146Q96CH1 333 aa12.82□□□□□ -0.36
UBE3B-202ENST00000342494 TBX15Q96SF7 602 aa12.82□□□□□ -0.36
UBE3B-202ENST00000342494 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.81□□□□□ -0.36
UBE3B-202ENST00000342494 ACAA1P09110 424 aaPredicted RBP12.81□□□□□ -0.36
UBE3B-202ENST00000342494 BCL2P10415 239 aa12.81□□□□□ -0.36
UBE3B-202ENST00000342494 HERPUD1Q15011 391 aa12.81□□□□□ -0.36
UBE3B-202ENST00000342494 OR5P3Q8WZ94 311 aa12.81□□□□□ -0.36
UBE3B-202ENST00000342494 AKIRIN1Q9H9L7 192 aaPredicted RBP12.81□□□□□ -0.36
UBE3B-202ENST00000342494 DNAJC4Q9NNZ3 241 aa12.81□□□□□ -0.36
UBE3B-202ENST00000342494 ZNF207O43670 478 aaKnown RBP12.81□□□□□ -0.36
UBE3B-202ENST00000342494 NPBWR2P48146 333 aa12.81□□□□□ -0.36
UBE3B-202ENST00000342494 CRYBA2P53672 197 aa12.81□□□□□ -0.36
UBE3B-202ENST00000342494 WDR25Q64LD2 544 aaPredicted RBP12.81□□□□□ -0.36
UBE3B-202ENST00000342494 OR4X2Q8NGF9 303 aa12.81□□□□□ -0.36
UBE3B-202ENST00000342494 PRO1933Q9H354 126 aa12.81□□□□□ -0.36
UBE3B-202ENST00000342494 GVINP1Q7Z2Y8 2422 aa12.81□□□□□ -0.36
UBE3B-202ENST00000342494 IGKV3-20P01619 116 aa12.81□□□□□ -0.36
UBE3B-202ENST00000342494 GCSHP23434 173 aa12.81□□□□□ -0.36
UBE3B-202ENST00000342494 NUTF2P61970 127 aaKnown RBP12.81□□□□□ -0.36
UBE3B-202ENST00000342494 WFDC6Q9BQY6 131 aa12.81□□□□□ -0.36
UBE3B-202ENST00000342494 DPM3Q9P2X0 92 aa12.81□□□□□ -0.36
UBE3B-202ENST00000342494 ELOA3CA0A087WX78 387 aaPredicted RBP12.81□□□□□ -0.36
UBE3B-202ENST00000342494 CKS2P33552 79 aa12.81□□□□□ -0.36
UBE3B-202ENST00000342494 UBE2V2Q15819 145 aa12.81□□□□□ -0.36
UBE3B-202ENST00000342494 ZNF343Q6P1L6 599 aa12.81□□□□□ -0.36
UBE3B-202ENST00000342494 SLC16A13Q7RTY0 426 aa12.81□□□□□ -0.36
UBE3B-202ENST00000342494 GALNT14Q96FL9 552 aa12.81□□□□□ -0.36
UBE3B-202ENST00000342494 GPR132Q9UNW8 380 aa12.81□□□□□ -0.36
UBE3B-202ENST00000342494 OR4C46A6NHA9 309 aa12.8□□□□□ -0.36
UBE3B-202ENST00000342494 C17orf51A8MQB3 221 aa12.8□□□□□ -0.36
UBE3B-202ENST00000342494 ANOS1P23352 680 aa12.8□□□□□ -0.36
UBE3B-202ENST00000342494 GPHA2Q96T91 129 aa12.8□□□□□ -0.36
UBE3B-202ENST00000342494 TUBD1Q9UJT1 453 aa12.8□□□□□ -0.36
UBE3B-202ENST00000342494 NDUFB4O95168 129 aa12.8□□□□□ -0.36
UBE3B-202ENST00000342494 VKORC1L1Q8N0U8 176 aa12.8□□□□□ -0.36
UBE3B-202ENST00000342494 SGMS2Q8NHU3 365 aa12.8□□□□□ -0.36
UBE3B-202ENST00000342494 RGP1Q92546 391 aaPredicted RBP12.8□□□□□ -0.36
UBE3B-202ENST00000342494 Q96M66 194 aa12.8□□□□□ -0.36
UBE3B-202ENST00000342494 TCF19Q9Y242 345 aa12.8□□□□□ -0.36
UBE3B-202ENST00000342494 IGHMP01871 453 aa12.8□□□□□ -0.36
UBE3B-202ENST00000342494 ZNF345Q14585 488 aa12.8□□□□□ -0.36
UBE3B-202ENST00000342494 ZNF79Q15937 498 aa12.8□□□□□ -0.36
UBE3B-202ENST00000342494 IBA57Q5T440 356 aaKnown RBP12.8□□□□□ -0.36
UBE3B-202ENST00000342494 FAM90A26D6RGX4 464 aa12.8□□□□□ -0.36
UBE3B-202ENST00000342494 AP4M1O00189 453 aa12.8□□□□□ -0.36
UBE3B-202ENST00000342494 IGLV3-19P01714 112 aa12.8□□□□□ -0.36
UBE3B-202ENST00000342494 CD81P60033 236 aa12.8□□□□□ -0.36
UBE3B-202ENST00000342494 C1orf162Q8NEQ5 155 aaPredicted RBP12.8□□□□□ -0.36
UBE3B-202ENST00000342494 OR51G1Q8NGK1 321 aa12.79□□□□□ -0.36
UBE3B-202ENST00000342494 SMIM12Q96EX1 92 aa12.79□□□□□ -0.36
UBE3B-202ENST00000342494 G6PC2Q9NQR9 355 aa12.79□□□□□ -0.36
UBE3B-202ENST00000342494 ZIC3O60481 467 aa12.79□□□□□ -0.36
UBE3B-202ENST00000342494 ZG16O60844 167 aa12.79□□□□□ -0.36
UBE3B-202ENST00000342494 HLA-DQB1P01920 261 aa12.79□□□□□ -0.36
UBE3B-202ENST00000342494 TNFRSF9Q07011 255 aa12.79□□□□□ -0.36
UBE3B-202ENST00000342494 KLF4O43474 513 aa12.79□□□□□ -0.36
UBE3B-202ENST00000342494 ZNF708P17019 499 aa12.79□□□□□ -0.36
UBE3B-202ENST00000342494 HIST1H1AQ02539 215 aaPredicted RBP12.79□□□□□ -0.36
UBE3B-202ENST00000342494 C2orf83Q53S99 150 aa12.79□□□□□ -0.36
UBE3B-202ENST00000342494 PEAR1Q5VY43 1037 aaPredicted RBP12.79□□□□□ -0.36
UBE3B-202ENST00000342494 SELENOHQ8IZQ5 122 aaKnown RBP12.79□□□□□ -0.36
UBE3B-202ENST00000342494 TAF15Q92804 592 aaKnown RBP eCLIP12.79□□□□□ -0.36
UBE3B-202ENST00000342494 DOCK5Q9H7D0 1870 aa12.79□□□□□ -0.36
UBE3B-202ENST00000342494 IGHV3OR16-13A0A075B7E8 117 aa12.79□□□□□ -0.36
UBE3B-202ENST00000342494 IGHV3-74A0A0B4J1X5 117 aa12.79□□□□□ -0.36
UBE3B-202ENST00000342494 C8orf88P0DMB2 117 aa12.79□□□□□ -0.36
UBE3B-202ENST00000342494 CDKN1AP38936 164 aa12.79□□□□□ -0.36
UBE3B-202ENST00000342494 RAB24Q969Q5 203 aa12.79□□□□□ -0.36
UBE3B-202ENST00000342494 OR5AC2Q9NZP5 309 aa12.79□□□□□ -0.36
UBE3B-202ENST00000342494 COL11A2P13942 1736 aaPredicted RBP12.78□□□□□ -0.36
UBE3B-202ENST00000342494 TRBV5-7A0A0A0MS05 114 aa12.78□□□□□ -0.36
UBE3B-202ENST00000342494 NPIPB13A6NJU9 1138 aa12.78□□□□□ -0.36
UBE3B-202ENST00000342494 NPIPB4C9JG80 1138 aa12.78□□□□□ -0.36
UBE3B-202ENST00000342494 GCM2O75603 506 aaPredicted RBP12.78□□□□□ -0.36
UBE3B-202ENST00000342494 IL4P05112 153 aa12.78□□□□□ -0.36
UBE3B-202ENST00000342494 CD99P14209 185 aa12.78□□□□□ -0.36
UBE3B-202ENST00000342494 FAM74A4Q5TZK3 123 aa12.78□□□□□ -0.36
UBE3B-202ENST00000342494 RNASE6Q93091 150 aaKnown RBP12.78□□□□□ -0.36
UBE3B-202ENST00000342494 TXNDC17Q9BRA2 123 aa12.78□□□□□ -0.36
UBE3B-202ENST00000342494 IGKV3OR2-268A0A0C4DH90 116 aa12.78□□□□□ -0.36
UBE3B-202ENST00000342494 RPS20P60866 119 aaKnown RBP12.78□□□□□ -0.36
UBE3B-202ENST00000342494 C9orf62Q8N4C0 152 aa12.78□□□□□ -0.36
UBE3B-202ENST00000342494 A0A0G2JLM5 398 aa12.78□□□□□ -0.36
UBE3B-202ENST00000342494 LOC390937A0A1W2PQ73 354 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 145.1 ms