RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 FAM206AQ9NX38 181 aa13.05□□□□□ -0.32
COL11A2-201ENST00000341947 MARCH11A6NNE9 402 aa13.05□□□□□ -0.32
COL11A2-201ENST00000341947 GPR132Q9UNW8 380 aa13.05□□□□□ -0.32
COL11A2-201ENST00000341947 TMEM262E9PQX1 116 aa13.04□□□□□ -0.32
COL11A2-201ENST00000341947 HLA-DQA1P01909 254 aa13.04□□□□□ -0.32
COL11A2-201ENST00000341947 FAM74A4Q5TZK3 123 aa13.04□□□□□ -0.32
COL11A2-201ENST00000341947 OR51G1Q8NGK1 321 aa13.04□□□□□ -0.32
COL11A2-201ENST00000341947 WNT5BQ9H1J7 359 aa13.04□□□□□ -0.32
COL11A2-201ENST00000341947 ARL6IP6Q8N6S5 226 aa13.04□□□□□ -0.32
COL11A2-201ENST00000341947 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.04□□□□□ -0.32
COL11A2-201ENST00000341947 LMX1BO60663 402 aa13.04□□□□□ -0.32
COL11A2-201ENST00000341947 TNFRSF9Q07011 255 aa13.04□□□□□ -0.32
COL11A2-201ENST00000341947 ZNF146Q15072 292 aa13.04□□□□□ -0.32
COL11A2-201ENST00000341947 AQP3Q92482 292 aa13.04□□□□□ -0.32
COL11A2-201ENST00000341947 LOC107984156A0A0G2JMH3 177 aa13.04□□□□□ -0.32
COL11A2-201ENST00000341947 A0A1W2PQM1 296 aa13.04□□□□□ -0.32
COL11A2-201ENST00000341947 EPOPA6NHQ4 379 aa13.04□□□□□ -0.32
COL11A2-201ENST00000341947 MEF2BQ02080 365 aaPredicted RBP13.04□□□□□ -0.32
COL11A2-201ENST00000341947 ARL17AQ8IVW1 177 aa13.04□□□□□ -0.32
COL11A2-201ENST00000341947 SRSF12Q8WXF0 261 aaKnown RBP13.04□□□□□ -0.32
COL11A2-201ENST00000341947 LINC00862A6NCI5 91 aa13.03□□□□□ -0.32
COL11A2-201ENST00000341947 HSPB1P04792 205 aaKnown RBP13.03□□□□□ -0.32
COL11A2-201ENST00000341947 TMEM54Q969K7 222 aa13.03□□□□□ -0.32
COL11A2-201ENST00000341947 WISP3O95389 354 aaPredicted RBP13.03□□□□□ -0.32
COL11A2-201ENST00000341947 FCARP24071 287 aa13.03□□□□□ -0.32
COL11A2-201ENST00000341947 GLIPR1P48060 266 aa13.03□□□□□ -0.32
COL11A2-201ENST00000341947 FUT5Q11128 374 aa13.03□□□□□ -0.32
COL11A2-201ENST00000341947 ZG16O60844 167 aa13.03□□□□□ -0.32
COL11A2-201ENST00000341947 RSPO4Q2I0M5 234 aaPredicted RBP13.03□□□□□ -0.32
COL11A2-201ENST00000341947 C1orf100Q5SVJ3 147 aa13.03□□□□□ -0.32
COL11A2-201ENST00000341947 FAM159AQ6UWV7 190 aa13.03□□□□□ -0.32
COL11A2-201ENST00000341947 NUTF2P61970 127 aaKnown RBP13.03□□□□□ -0.32
COL11A2-201ENST00000341947 MRPL32Q9BYC8 188 aaKnown RBP13.03□□□□□ -0.32
COL11A2-201ENST00000341947 GEMIN7Q9H840 131 aaKnown RBP13.03□□□□□ -0.32
COL11A2-201ENST00000341947 QSER1Q2KHR3 1735 aa13.03□□□□□ -0.32
COL11A2-201ENST00000341947 ARL14EPLP0DKL9 152 aa13.03□□□□□ -0.32
COL11A2-201ENST00000341947 HIST1H1AQ02539 215 aaPredicted RBP13.03□□□□□ -0.32
COL11A2-201ENST00000341947 GPR61Q9BZJ8 451 aa13.03□□□□□ -0.32
COL11A2-201ENST00000341947 TRGV3P03979 118 aa13.02□□□□□ -0.32
COL11A2-201ENST00000341947 LHFPL5Q8TAF8 219 aa13.02□□□□□ -0.32
COL11A2-201ENST00000341947 HSPB9Q9BQS6 159 aa13.02□□□□□ -0.32
COL11A2-201ENST00000341947 HKR1P10072 659 aa13.02□□□□□ -0.32
COL11A2-201ENST00000341947 C19orf24Q9BVV8 132 aa13.02□□□□□ -0.32
COL11A2-201ENST00000341947 SHANK3Q9BYB0 1731 aa13.02□□□□□ -0.32
COL11A2-201ENST00000341947 P2RY4P51582 365 aa13.02□□□□□ -0.33
COL11A2-201ENST00000341947 CSRP2Q16527 193 aa13.02□□□□□ -0.33
COL11A2-201ENST00000341947 IGHMP01871 453 aa13.02□□□□□ -0.33
COL11A2-201ENST00000341947 MUC1P15941 1255 aaPredicted RBP13.02□□□□□ -0.33
COL11A2-201ENST00000341947 COTL1Q14019 142 aa13.02□□□□□ -0.33
COL11A2-201ENST00000341947 ERASQ7Z444 233 aa13.02□□□□□ -0.33
COL11A2-201ENST00000341947 HIST1H4GQ99525 98 aa13.02□□□□□ -0.33
COL11A2-201ENST00000341947 J3QW42 95 aa13.02□□□□□ -0.33
COL11A2-201ENST00000341947 MDKP21741 143 aaPredicted RBP13.02□□□□□ -0.33
COL11A2-201ENST00000341947 KIR2DL4Q99706 377 aa13.02□□□□□ -0.33
COL11A2-201ENST00000341947 RECKO95980 971 aa13.01□□□□□ -0.33
COL11A2-201ENST00000341947 CD300CQ08708 224 aa13.01□□□□□ -0.33
COL11A2-201ENST00000341947 ACSF3Q4G176 576 aaPredicted RBP13.01□□□□□ -0.33
COL11A2-201ENST00000341947 TCF24Q7RTU0 167 aa13.01□□□□□ -0.33
COL11A2-201ENST00000341947 TCF19Q9Y242 345 aa13.01□□□□□ -0.33
COL11A2-201ENST00000341947 Q6ZT83 130 aa13.01□□□□□ -0.33
COL11A2-201ENST00000341947 TMEM74BQ9NUR3 256 aa13.01□□□□□ -0.33
COL11A2-201ENST00000341947 CNTRLQ7Z7A1 2325 aa13.01□□□□□ -0.33
COL11A2-201ENST00000341947 IGKV3-20P01619 116 aa13.01□□□□□ -0.33
COL11A2-201ENST00000341947 SMUG1Q53HV7 270 aa13.01□□□□□ -0.33
COL11A2-201ENST00000341947 FDCSPQ8NFU4 85 aa13.01□□□□□ -0.33
COL11A2-201ENST00000341947 TRBV5-7A0A0A0MS05 114 aa13.01□□□□□ -0.33
COL11A2-201ENST00000341947 HLA-DQB1P01920 261 aa13.01□□□□□ -0.33
COL11A2-201ENST00000341947 PRSS2P07478 247 aa13.01□□□□□ -0.33
COL11A2-201ENST00000341947 Q96M66 194 aa13.01□□□□□ -0.33
COL11A2-201ENST00000341947 NEU1Q99519 415 aa13.01□□□□□ -0.33
COL11A2-201ENST00000341947 SSBP3Q9BWW4 388 aaPredicted RBP13.01□□□□□ -0.33
COL11A2-201ENST00000341947 LEPROTL1O95214 131 aa13.01□□□□□ -0.33
COL11A2-201ENST00000341947 SPATA45Q537H7 98 aa13.01□□□□□ -0.33
COL11A2-201ENST00000341947 OR5P3Q8WZ94 311 aa13.01□□□□□ -0.33
COL11A2-201ENST00000341947 NRIP2Q9BQI9 281 aa13.01□□□□□ -0.33
COL11A2-201ENST00000341947 LAMB2P55268 1798 aa13□□□□□ -0.33
COL11A2-201ENST00000341947 C7orf66A4D0T2 115 aa13□□□□□ -0.33
COL11A2-201ENST00000341947 EIF4EBP2Q13542 120 aaPredicted RBP13□□□□□ -0.33
COL11A2-201ENST00000341947 SPSB4Q96A44 273 aa13□□□□□ -0.33
COL11A2-201ENST00000341947 MRPL18Q9H0U6 180 aaKnown RBP13□□□□□ -0.33
COL11A2-201ENST00000341947 SMCHD1A6NHR9 2005 aa13□□□□□ -0.33
COL11A2-201ENST00000341947 A1L4Q6 167 aa13□□□□□ -0.33
COL11A2-201ENST00000341947 C1QCP02747 245 aa13□□□□□ -0.33
COL11A2-201ENST00000341947 PAPPA-AS1Q5QFB9 102 aa13□□□□□ -0.33
COL11A2-201ENST00000341947 VKORC1L1Q8N0U8 176 aa13□□□□□ -0.33
COL11A2-201ENST00000341947 TMEM101Q96IK0 257 aa13□□□□□ -0.33
COL11A2-201ENST00000341947 TMEM70Q9BUB7 260 aa13□□□□□ -0.33
COL11A2-201ENST00000341947 MYO7AQ13402 2215 aa13□□□□□ -0.33
COL11A2-201ENST00000341947 TRPM6Q9BX84 2022 aa13□□□□□ -0.33
COL11A2-201ENST00000341947 IL4P05112 153 aa13□□□□□ -0.33
COL11A2-201ENST00000341947 FABP2P12104 132 aa13□□□□□ -0.33
COL11A2-201ENST00000341947 TIMM23BQ5SRD1 257 aa13□□□□□ -0.33
COL11A2-201ENST00000341947 CXCL2P19875 107 aa13□□□□□ -0.33
COL11A2-201ENST00000341947 PEAR1Q5VY43 1037 aaPredicted RBP13□□□□□ -0.33
COL11A2-201ENST00000341947 NEU4Q8WWR8 484 aaPredicted RBP13□□□□□ -0.33
COL11A2-201ENST00000341947 SGK494Q96LW2 274 aa13□□□□□ -0.33
COL11A2-201ENST00000341947 FBLL1A6NHQ2 334 aaKnown RBP13□□□□□ -0.33
COL11A2-201ENST00000341947 H3BTX0 84 aa13□□□□□ -0.33
COL11A2-201ENST00000341947 PPP1R32Q7Z5V6 425 aa13□□□□□ -0.33
COL11A2-201ENST00000341947 LINC00470Q9BZP3 86 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms