RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 ERVK-16P61578 105 aa14.13□□□□□ -0.15
CLDN4-201ENST00000340958 DEFB113Q30KQ7 82 aa14.13□□□□□ -0.15
CLDN4-201ENST00000340958 H2BFWTQ7Z2G1 175 aa14.13□□□□□ -0.15
CLDN4-201ENST00000340958 DMBX1Q8NFW5 382 aa14.13□□□□□ -0.15
CLDN4-201ENST00000340958 BEX4Q9NWD9 120 aaPredicted RBP14.13□□□□□ -0.15
CLDN4-201ENST00000340958 AMMECR1Q9Y4X0 333 aaPredicted RBP14.13□□□□□ -0.15
CLDN4-201ENST00000340958 A0A1B0GU03 582 aa14.13□□□□□ -0.15
CLDN4-201ENST00000340958 HMSDA8MTL9 139 aa14.13□□□□□ -0.15
CLDN4-201ENST00000340958 A8MXK9 166 aa14.13□□□□□ -0.15
CLDN4-201ENST00000340958 VWC2LB2RUY7 222 aa14.13□□□□□ -0.15
CLDN4-201ENST00000340958 H7C2Y5 167 aa14.13□□□□□ -0.15
CLDN4-201ENST00000340958 ST8SIA3O43173 380 aa14.13□□□□□ -0.15
CLDN4-201ENST00000340958 RBMXL2O75526 392 aaKnown RBP14.13□□□□□ -0.15
CLDN4-201ENST00000340958 NXPH3O95157 252 aa14.13□□□□□ -0.15
CLDN4-201ENST00000340958 IGKV1-5P01602 117 aa14.13□□□□□ -0.15
CLDN4-201ENST00000340958 APOA2P02652 100 aa14.13□□□□□ -0.15
CLDN4-201ENST00000340958 ARG1P05089 322 aa14.13□□□□□ -0.15
CLDN4-201ENST00000340958 CT45A6P0DMU7 189 aa14.13□□□□□ -0.15
CLDN4-201ENST00000340958 CT45A5P0DMU8 189 aa14.13□□□□□ -0.15
CLDN4-201ENST00000340958 CT45A7P0DMV0 189 aa14.13□□□□□ -0.15
CLDN4-201ENST00000340958 C4BPBP20851 252 aa14.13□□□□□ -0.15
CLDN4-201ENST00000340958 NKX2-1P43699 371 aaPredicted RBP14.13□□□□□ -0.15
CLDN4-201ENST00000340958 TGIF2LXQ8IUE1 241 aa14.13□□□□□ -0.15
CLDN4-201ENST00000340958 KIR3DL3Q8N743 410 aa14.13□□□□□ -0.15
CLDN4-201ENST00000340958 Q8N7P7 452 aa14.13□□□□□ -0.15
CLDN4-201ENST00000340958 ZNF383Q8NA42 475 aa14.13□□□□□ -0.15
CLDN4-201ENST00000340958 R3HDM4Q96D70 268 aa14.13□□□□□ -0.15
CLDN4-201ENST00000340958 MRPL20Q9BYC9 149 aaKnown RBP14.13□□□□□ -0.15
CLDN4-201ENST00000340958 MFFQ9GZY8 342 aa14.13□□□□□ -0.15
CLDN4-201ENST00000340958 PLEKHA2Q9HB19 425 aa14.13□□□□□ -0.15
CLDN4-201ENST00000340958 MMP26Q9NRE1 261 aa14.13□□□□□ -0.15
CLDN4-201ENST00000340958 CACNG5Q9UF02 275 aa14.13□□□□□ -0.15
CLDN4-201ENST00000340958 KPTNQ9Y664 436 aa14.13□□□□□ -0.15
CLDN4-201ENST00000340958 WRBO00258 174 aa14.12□□□□□ -0.15
CLDN4-201ENST00000340958 CRYZL1O95825 349 aa14.12□□□□□ -0.15
CLDN4-201ENST00000340958 MBPP02686 304 aaPredicted RBP14.12□□□□□ -0.15
CLDN4-201ENST00000340958 BRWD1-AS2P59051 145 aa14.12□□□□□ -0.15
CLDN4-201ENST00000340958 IZUMO4Q1ZYL8 232 aa14.12□□□□□ -0.15
CLDN4-201ENST00000340958 HLA-DRB5Q30154 266 aa14.12□□□□□ -0.15
CLDN4-201ENST00000340958 FAM71F2Q6NXP2 309 aa14.12□□□□□ -0.15
CLDN4-201ENST00000340958 PRSS54Q6PEW0 395 aa14.12□□□□□ -0.15
CLDN4-201ENST00000340958 VMO1Q7Z5L0 202 aa14.12□□□□□ -0.15
CLDN4-201ENST00000340958 BEND2Q8NDZ0 799 aa14.12□□□□□ -0.15
CLDN4-201ENST00000340958 FOXC2Q99958 501 aa14.12□□□□□ -0.15
CLDN4-201ENST00000340958 PCGF1Q9BSM1 259 aa14.12□□□□□ -0.15
CLDN4-201ENST00000340958 ZC4H2Q9NQZ6 224 aa14.12□□□□□ -0.15
CLDN4-201ENST00000340958 SLC35D1Q9NTN3 355 aa14.12□□□□□ -0.15
CLDN4-201ENST00000340958 MMP24Q9Y5R2 645 aa14.12□□□□□ -0.15
CLDN4-201ENST00000340958 A0A0G2JRQ6 117 aa14.11□□□□□ -0.15
CLDN4-201ENST00000340958 MARCH11A6NNE9 402 aa14.11□□□□□ -0.15
CLDN4-201ENST00000340958 FAM157AC9JC47 383 aa14.11□□□□□ -0.15
CLDN4-201ENST00000340958 RBFOX2O43251 390 aaKnown RBP eCLIP14.11□□□□□ -0.15
CLDN4-201ENST00000340958 PRTN3P24158 256 aa14.11□□□□□ -0.15
CLDN4-201ENST00000340958 IL15RAQ13261 267 aa14.11□□□□□ -0.15
CLDN4-201ENST00000340958 LGALSLQ3ZCW2 172 aaPredicted RBP14.11□□□□□ -0.15
CLDN4-201ENST00000340958 C1orf122Q6ZSJ8 110 aa14.11□□□□□ -0.15
CLDN4-201ENST00000340958 SSX9Q7RTT3 188 aa14.11□□□□□ -0.15
CLDN4-201ENST00000340958 PDZD9Q8IXQ8 264 aa14.11□□□□□ -0.15
CLDN4-201ENST00000340958 OR4D5Q8NGN0 318 aa14.11□□□□□ -0.15
CLDN4-201ENST00000340958 DDB2Q92466 427 aa14.11□□□□□ -0.15
CLDN4-201ENST00000340958 CITED4Q96RK1 184 aa14.11□□□□□ -0.15
CLDN4-201ENST00000340958 LEUTXA8MZ59 168 aa14.11□□□□□ -0.15
CLDN4-201ENST00000340958 BUB1B-PAK6H3BSN5 160 aa14.11□□□□□ -0.15
CLDN4-201ENST00000340958 TOX4O94842 621 aa14.11□□□□□ -0.15
CLDN4-201ENST00000340958 SLC25A6P12236 298 aa14.11□□□□□ -0.15
CLDN4-201ENST00000340958 NQO2P16083 231 aa14.11□□□□□ -0.15
CLDN4-201ENST00000340958 SLC25A16P16260 332 aa14.11□□□□□ -0.15
CLDN4-201ENST00000340958 TMEM65Q6PI78 240 aa14.11□□□□□ -0.15
CLDN4-201ENST00000340958 TEX261Q6UWH6 196 aa14.11□□□□□ -0.15
CLDN4-201ENST00000340958 OR8H1Q8NGG4 311 aa14.11□□□□□ -0.15
CLDN4-201ENST00000340958 RPEQ96AT9 228 aa14.11□□□□□ -0.15
CLDN4-201ENST00000340958 OR5AC2Q9NZP5 309 aa14.11□□□□□ -0.15
CLDN4-201ENST00000340958 U3KQ87 197 aa14.11□□□□□ -0.15
CLDN4-201ENST00000340958 LINC00862A6NCI5 91 aa14.1□□□□□ -0.15
CLDN4-201ENST00000340958 K7EPK0 472 aa14.1□□□□□ -0.15
CLDN4-201ENST00000340958 PVALBP20472 110 aaPredicted RBP14.1□□□□□ -0.15
CLDN4-201ENST00000340958 USF1P22415 310 aaPredicted RBP14.1□□□□□ -0.15
CLDN4-201ENST00000340958 DVL1P1P54792 670 aaPredicted RBP14.1□□□□□ -0.15
CLDN4-201ENST00000340958 TAGLNQ01995 201 aaKnown RBP14.1□□□□□ -0.15
CLDN4-201ENST00000340958 DIAPH2-AS1Q14236 149 aa14.1□□□□□ -0.15
CLDN4-201ENST00000340958 FAM71E2Q8N5Q1 922 aa14.1□□□□□ -0.15
CLDN4-201ENST00000340958 RNF126Q9BV68 326 aa14.1□□□□□ -0.15
CLDN4-201ENST00000340958 MAGT1Q9H0U3 335 aa14.1□□□□□ -0.15
CLDN4-201ENST00000340958 AUP1Q9Y679 476 aa14.1□□□□□ -0.15
CLDN4-201ENST00000340958 POMT1Q9Y6A1 747 aa14.1□□□□□ -0.15
CLDN4-201ENST00000340958 HIVEP1P15822 2718 aa14.09□□□□□ -0.15
CLDN4-201ENST00000340958 H0YIZ8 118 aa14.09□□□□□ -0.15
CLDN4-201ENST00000340958 DEDDO75618 318 aa14.09□□□□□ -0.15
CLDN4-201ENST00000340958 IGLV1-47P01700 117 aa14.09□□□□□ -0.15
CLDN4-201ENST00000340958 RRASP10301 218 aa14.09□□□□□ -0.15
CLDN4-201ENST00000340958 CXCL2P19875 107 aa14.09□□□□□ -0.15
CLDN4-201ENST00000340958 HTR1DP28221 377 aa14.09□□□□□ -0.15
CLDN4-201ENST00000340958 VAMP2P63027 116 aa14.09□□□□□ -0.15
CLDN4-201ENST00000340958 KLRD1Q13241 179 aa14.09□□□□□ -0.15
CLDN4-201ENST00000340958 CXorf66Q5JRM2 361 aaPredicted RBP14.09□□□□□ -0.15
CLDN4-201ENST00000340958 ZNF680Q8NEM1 530 aa14.09□□□□□ -0.15
CLDN4-201ENST00000340958 ARL6Q9H0F7 186 aa14.09□□□□□ -0.15
CLDN4-201ENST00000340958 TNFSF18Q9UNG2 199 aa14.09□□□□□ -0.15
CLDN4-201ENST00000340958 RCL1Q9Y2P8 373 aaKnown RBP14.09□□□□□ -0.15
CLDN4-201ENST00000340958 A0A1W2PRD5 423 aa14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms