RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 ALKBH6Q3KRA9 238 aa12.72□□□□□ -0.37
BRAT1-201ENST00000340611 ACY3Q96HD9 319 aa12.72□□□□□ -0.37
BRAT1-201ENST00000340611 IL19Q9UHD0 177 aa12.72□□□□□ -0.37
BRAT1-201ENST00000340611 ST8SIA3O43173 380 aa12.71□□□□□ -0.37
BRAT1-201ENST00000340611 ZNF83P51522 516 aa12.71□□□□□ -0.37
BRAT1-201ENST00000340611 VAMP3Q15836 100 aa12.71□□□□□ -0.37
BRAT1-201ENST00000340611 CLDND2Q8NHS1 167 aa12.71□□□□□ -0.37
BRAT1-201ENST00000340611 TXN2Q99757 166 aa12.71□□□□□ -0.37
BRAT1-201ENST00000340611 SMDT1Q9H4I9 107 aa12.71□□□□□ -0.37
BRAT1-201ENST00000340611 B4DEV8 164 aa12.71□□□□□ -0.38
BRAT1-201ENST00000340611 EWSR1Q01844 656 aaKnown RBP eCLIP12.71□□□□□ -0.38
BRAT1-201ENST00000340611 FBLN7Q53RD9 439 aa12.71□□□□□ -0.38
BRAT1-201ENST00000340611 GPR157Q5UAW9 335 aa12.71□□□□□ -0.38
BRAT1-201ENST00000340611 FAM90A2PQ658T7 463 aa12.71□□□□□ -0.38
BRAT1-201ENST00000340611 COLCA1Q6ZS62 124 aa12.71□□□□□ -0.38
BRAT1-201ENST00000340611 TMEM217Q8N7C4 229 aa12.71□□□□□ -0.38
BRAT1-201ENST00000340611 ORAOV1Q8WV07 137 aa12.71□□□□□ -0.38
BRAT1-201ENST00000340611 NANOS1Q8WY41 292 aaKnown RBP12.71□□□□□ -0.38
BRAT1-201ENST00000340611 ZNF430Q9H8G1 570 aaPredicted RBP12.71□□□□□ -0.38
BRAT1-201ENST00000340611 PATZ1Q9HBE1 687 aaKnown RBP12.71□□□□□ -0.38
BRAT1-201ENST00000340611 ABCA4P78363 2273 aa12.71□□□□□ -0.38
BRAT1-201ENST00000340611 IGKV1-27A0A075B6S5 117 aa12.7□□□□□ -0.38
BRAT1-201ENST00000340611 GRIFINA4D1Z8 144 aa12.7□□□□□ -0.38
BRAT1-201ENST00000340611 SPRY1O43609 319 aaPredicted RBP12.7□□□□□ -0.38
BRAT1-201ENST00000340611 PPBPP02775 128 aa12.7□□□□□ -0.38
BRAT1-201ENST00000340611 GALR1P47211 349 aa12.7□□□□□ -0.38
BRAT1-201ENST00000340611 SAXO1Q8IYX7 474 aa12.7□□□□□ -0.38
BRAT1-201ENST00000340611 ST6GALNAC3Q8NDV1 305 aa12.7□□□□□ -0.38
BRAT1-201ENST00000340611 TMEM170AQ8WVE7 144 aa12.7□□□□□ -0.38
BRAT1-201ENST00000340611 C20orf144Q9BQM9 153 aa12.7□□□□□ -0.38
BRAT1-201ENST00000340611 RALYQ9UKM9 306 aaKnown RBP12.7□□□□□ -0.38
BRAT1-201ENST00000340611 ZNF835Q9Y2P0 537 aa12.7□□□□□ -0.38
BRAT1-201ENST00000340611 DCHS2Q6V1P9 2916 aa12.7□□□□□ -0.38
BRAT1-201ENST00000340611 PHF1O43189 567 aaPredicted RBP12.7□□□□□ -0.38
BRAT1-201ENST00000340611 CECR9P0C854 216 aa12.7□□□□□ -0.38
BRAT1-201ENST00000340611 CNN1P51911 297 aaKnown RBP12.7□□□□□ -0.38
BRAT1-201ENST00000340611 IL24Q13007 206 aa12.7□□□□□ -0.38
BRAT1-201ENST00000340611 ZNF506Q5JVG8 444 aa12.7□□□□□ -0.38
BRAT1-201ENST00000340611 LHFPL4Q7Z7J7 247 aa12.7□□□□□ -0.38
BRAT1-201ENST00000340611 CORO2AQ92828 525 aa12.7□□□□□ -0.38
BRAT1-201ENST00000340611 MAGT1Q9H0U3 335 aa12.7□□□□□ -0.38
BRAT1-201ENST00000340611 SLC2A9Q9NRM0 540 aa12.7□□□□□ -0.38
BRAT1-201ENST00000340611 NXPH3O95157 252 aa12.69□□□□□ -0.38
BRAT1-201ENST00000340611 DUSP1P28562 367 aa12.69□□□□□ -0.38
BRAT1-201ENST00000340611 GCH1P30793 250 aa12.69□□□□□ -0.38
BRAT1-201ENST00000340611 PDCD1Q15116 288 aa12.69□□□□□ -0.38
BRAT1-201ENST00000340611 Q6ZN92 141 aa12.69□□□□□ -0.38
BRAT1-201ENST00000340611 MRPL21Q7Z2W9 205 aaKnown RBP12.69□□□□□ -0.38
BRAT1-201ENST00000340611 OR5B12Q96R08 314 aa12.69□□□□□ -0.38
BRAT1-201ENST00000340611 RBKSQ9H477 322 aa12.69□□□□□ -0.38
BRAT1-201ENST00000340611 PDLIM4P50479 330 aa12.69□□□□□ -0.38
BRAT1-201ENST00000340611 LCN15Q6UWW0 184 aa12.69□□□□□ -0.38
BRAT1-201ENST00000340611 LIAT1Q6ZQX7 453 aa12.69□□□□□ -0.38
BRAT1-201ENST00000340611 APOBEC3DQ96AK3 386 aaPredicted RBP12.69□□□□□ -0.38
BRAT1-201ENST00000340611 UTP20O75691 2785 aaKnown RBP12.69□□□□□ -0.38
BRAT1-201ENST00000340611 IGSF23A1L1A6 192 aa12.68□□□□□ -0.38
BRAT1-201ENST00000340611 CDSNQ15517 529 aa12.68□□□□□ -0.38
BRAT1-201ENST00000340611 TBC1D28Q2M2D7 210 aa12.68□□□□□ -0.38
BRAT1-201ENST00000340611 Q6ZWC4 215 aa12.68□□□□□ -0.38
BRAT1-201ENST00000340611 ZNF738Q8NE65 137 aa12.68□□□□□ -0.38
BRAT1-201ENST00000340611 TM2D1Q9BX74 207 aa12.68□□□□□ -0.38
BRAT1-201ENST00000340611 FGF23Q9GZV9 251 aaPredicted RBP12.68□□□□□ -0.38
BRAT1-201ENST00000340611 ZNF665Q9H7R5 613 aa12.68□□□□□ -0.38
BRAT1-201ENST00000340611 SDF2L1Q9HCN8 221 aa12.68□□□□□ -0.38
BRAT1-201ENST00000340611 OR6C3Q9NZP0 311 aa12.68□□□□□ -0.38
BRAT1-201ENST00000340611 M0R1B8 84 aa12.68□□□□□ -0.38
BRAT1-201ENST00000340611 CST7O76096 145 aa12.68□□□□□ -0.38
BRAT1-201ENST00000340611 NRASP01111 189 aa12.68□□□□□ -0.38
BRAT1-201ENST00000340611 PFN1P07737 140 aaKnown RBP12.68□□□□□ -0.38
BRAT1-201ENST00000340611 ECI1P42126 302 aa12.68□□□□□ -0.38
BRAT1-201ENST00000340611 FAM3BP58499 235 aaPredicted RBP12.68□□□□□ -0.38
BRAT1-201ENST00000340611 GNMTQ14749 295 aa12.68□□□□□ -0.38
BRAT1-201ENST00000340611 OCIAD2Q56VL3 154 aa12.68□□□□□ -0.38
BRAT1-201ENST00000340611 PLCXD3Q63HM9 321 aa12.68□□□□□ -0.38
BRAT1-201ENST00000340611 TMEM171Q8WVE6 324 aa12.68□□□□□ -0.38
BRAT1-201ENST00000340611 BOD1Q96IK1 185 aa12.68□□□□□ -0.38
BRAT1-201ENST00000340611 C18orf12Q96KH6 178 aa12.68□□□□□ -0.38
BRAT1-201ENST00000340611 GPHA2Q96T91 129 aa12.68□□□□□ -0.38
BRAT1-201ENST00000340611 HSPB9Q9BQS6 159 aa12.68□□□□□ -0.38
BRAT1-201ENST00000340611 REPIN1Q9BWE0 567 aaKnown RBP12.68□□□□□ -0.38
BRAT1-201ENST00000340611 SFXN3Q9BWM7 321 aa12.68□□□□□ -0.38
BRAT1-201ENST00000340611 IGHV1-18A0A0C4DH31 117 aa12.68□□□□□ -0.38
BRAT1-201ENST00000340611 H7BYZ3 331 aa12.68□□□□□ -0.38
BRAT1-201ENST00000340611 MTCP1P56278 107 aa12.68□□□□□ -0.38
BRAT1-201ENST00000340611 HOXA4Q00056 320 aaPredicted RBP12.68□□□□□ -0.38
BRAT1-201ENST00000340611 IL13RA2Q14627 380 aa12.68□□□□□ -0.38
BRAT1-201ENST00000340611 MRPL52Q86TS9 123 aaKnown RBP12.68□□□□□ -0.38
BRAT1-201ENST00000340611 MSI2Q96DH6 328 aaKnown RBP12.68□□□□□ -0.38
BRAT1-201ENST00000340611 CST9LQ9H4G1 147 aa12.68□□□□□ -0.38
BRAT1-201ENST00000340611 TMEM106BQ9NUM4 274 aa12.68□□□□□ -0.38
BRAT1-201ENST00000340611 NECAP2Q9NVZ3 263 aa12.68□□□□□ -0.38
BRAT1-201ENST00000340611 LAMTOR2Q9Y2Q5 125 aa12.68□□□□□ -0.38
BRAT1-201ENST00000340611 SELENOKQ9Y6D0 94 aa12.68□□□□□ -0.38
BRAT1-201ENST00000340611 NKX2-6A6NCS4 301 aa12.67□□□□□ -0.38
BRAT1-201ENST00000340611 TPTE2P1Q5T6R2 138 aa12.67□□□□□ -0.38
BRAT1-201ENST00000340611 OR2C3Q8N628 320 aa12.67□□□□□ -0.38
BRAT1-201ENST00000340611 SLC25A40Q8TBP6 338 aa12.67□□□□□ -0.38
BRAT1-201ENST00000340611 BTF3L4Q96K17 158 aa12.67□□□□□ -0.38
BRAT1-201ENST00000340611 Q96M66 194 aa12.67□□□□□ -0.38
BRAT1-201ENST00000340611 FAM103A1Q9BTL3 118 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms