RNA–Protein interactions for RNA: ENST00000340384.4

TUBB4B-201, Transcript of tubulin beta 4B class IVb, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB4B, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-201ENST00000340384 PJVKQ0ZLH3 352 aa12.52□□□□□ -0.4
TUBB4B-201ENST00000340384 PXDC1Q5TGL8 231 aa12.52□□□□□ -0.4
TUBB4B-201ENST00000340384 CLEC9AQ6UXN8 241 aa12.52□□□□□ -0.4
TUBB4B-201ENST00000340384 Q6ZRM9 215 aa12.52□□□□□ -0.4
TUBB4B-201ENST00000340384 FAM216BQ8N7L0 139 aa12.52□□□□□ -0.4
TUBB4B-201ENST00000340384 OR5C1Q8NGR4 320 aa12.52□□□□□ -0.4
TUBB4B-201ENST00000340384 RAB39BQ96DA2 213 aa12.52□□□□□ -0.4
TUBB4B-201ENST00000340384 LINC00052Q96N35 136 aa12.52□□□□□ -0.4
TUBB4B-201ENST00000340384 ATP5SQ99766 215 aa12.52□□□□□ -0.4
TUBB4B-201ENST00000340384 SLC25A10Q9UBX3 287 aaPredicted RBP12.52□□□□□ -0.4
TUBB4B-201ENST00000340384 ASH1LQ9NR48 2969 aaKnown RBP12.52□□□□□ -0.41
TUBB4B-201ENST00000340384 UMAD1C9J7I0 102 aa12.51□□□□□ -0.41
TUBB4B-201ENST00000340384 M0R1X1 148 aa12.51□□□□□ -0.41
TUBB4B-201ENST00000340384 NDUFB3O43676 98 aa12.51□□□□□ -0.41
TUBB4B-201ENST00000340384 LY6HO94772 140 aa12.51□□□□□ -0.41
TUBB4B-201ENST00000340384 KRASP01116 189 aa12.51□□□□□ -0.41
TUBB4B-201ENST00000340384 IFNA5P01569 189 aa12.51□□□□□ -0.41
TUBB4B-201ENST00000340384 P0C879 139 aa12.51□□□□□ -0.41
TUBB4B-201ENST00000340384 SELLP14151 372 aa12.51□□□□□ -0.41
TUBB4B-201ENST00000340384 NDUFB7P17568 137 aa12.51□□□□□ -0.41
TUBB4B-201ENST00000340384 OMGP23515 440 aa12.51□□□□□ -0.41
TUBB4B-201ENST00000340384 G6PCP35575 357 aa12.51□□□□□ -0.41
TUBB4B-201ENST00000340384 DYNLT3P51808 116 aa12.51□□□□□ -0.41
TUBB4B-201ENST00000340384 PAX9P55771 341 aa12.51□□□□□ -0.41
TUBB4B-201ENST00000340384 CLINT1Q14677 625 aa12.51□□□□□ -0.41
TUBB4B-201ENST00000340384 LRRC10Q5BKY1 277 aa12.51□□□□□ -0.41
TUBB4B-201ENST00000340384 OR2B11Q5JQS5 317 aa12.51□□□□□ -0.41
TUBB4B-201ENST00000340384 COMMD1Q8N668 190 aa12.51□□□□□ -0.41
TUBB4B-201ENST00000340384 CIB3Q96Q77 187 aaPredicted RBP12.51□□□□□ -0.41
TUBB4B-201ENST00000340384 HSPB7Q9UBY9 170 aa12.51□□□□□ -0.41
TUBB4B-201ENST00000340384 USF3Q68DE3 2245 aa12.51□□□□□ -0.41
TUBB4B-201ENST00000340384 BAHCC1Q9P281 2608 aa12.51□□□□□ -0.41
TUBB4B-201ENST00000340384 VPS13CQ709C8 3753 aa12.51□□□□□ -0.41
TUBB4B-201ENST00000340384 TMEM50AO95807 157 aa12.51□□□□□ -0.41
TUBB4B-201ENST00000340384 THBS3P49746 956 aa12.51□□□□□ -0.41
TUBB4B-201ENST00000340384 UBE2KP61086 200 aa12.51□□□□□ -0.41
TUBB4B-201ENST00000340384 ERVK-16P61578 105 aa12.51□□□□□ -0.41
TUBB4B-201ENST00000340384 TNFRSF9Q07011 255 aa12.51□□□□□ -0.41
TUBB4B-201ENST00000340384 FAM53AQ6NSI3 398 aaPredicted RBP12.51□□□□□ -0.41
TUBB4B-201ENST00000340384 Q6ZRG5 221 aa12.51□□□□□ -0.41
TUBB4B-201ENST00000340384 HSD17B11Q8NBQ5 300 aa12.51□□□□□ -0.41
TUBB4B-201ENST00000340384 CCL17Q92583 94 aa12.51□□□□□ -0.41
TUBB4B-201ENST00000340384 S1PR3Q99500 378 aa12.51□□□□□ -0.41
TUBB4B-201ENST00000340384 IFI27L2Q9H2X8 130 aa12.51□□□□□ -0.41
TUBB4B-201ENST00000340384 DSCAML1Q8TD84 2053 aa12.5□□□□□ -0.41
TUBB4B-201ENST00000340384 MEX3AA1L020 520 aaKnown RBP12.5□□□□□ -0.41
TUBB4B-201ENST00000340384 CST7O76096 145 aa12.5□□□□□ -0.41
TUBB4B-201ENST00000340384 PRH1P02810 166 aa12.5□□□□□ -0.41
TUBB4B-201ENST00000340384 DAOP14920 347 aa12.5□□□□□ -0.41
TUBB4B-201ENST00000340384 CAMLGP49069 296 aa12.5□□□□□ -0.41
TUBB4B-201ENST00000340384 IZUMO4Q1ZYL8 232 aa12.5□□□□□ -0.41
TUBB4B-201ENST00000340384 HFEQ30201 348 aa12.5□□□□□ -0.41
TUBB4B-201ENST00000340384 SLC25A24Q6NUK1 477 aa12.5□□□□□ -0.41
TUBB4B-201ENST00000340384 R3HDM4Q96D70 268 aa12.5□□□□□ -0.41
TUBB4B-201ENST00000340384 NARS2Q96I59 477 aaKnown RBP12.5□□□□□ -0.41
TUBB4B-201ENST00000340384 TSNAXQ99598 290 aaKnown RBP12.5□□□□□ -0.41
TUBB4B-201ENST00000340384 HRH4Q9H3N8 390 aa12.5□□□□□ -0.41
TUBB4B-201ENST00000340384 DCAF16Q9NXF7 216 aa12.5□□□□□ -0.41
TUBB4B-201ENST00000340384 IGHV1-69-2A0A0G2JMI3 117 aa12.49□□□□□ -0.41
TUBB4B-201ENST00000340384 MARCH11A6NNE9 402 aa12.49□□□□□ -0.41
TUBB4B-201ENST00000340384 LINC00473A8K010 186 aa12.49□□□□□ -0.41
TUBB4B-201ENST00000340384 LYNX1G3V0Z9 82 aa12.49□□□□□ -0.41
TUBB4B-201ENST00000340384 FCGR3BO75015 233 aa12.49□□□□□ -0.41
TUBB4B-201ENST00000340384 CRYZL1O95825 349 aa12.49□□□□□ -0.41
TUBB4B-201ENST00000340384 LYNX1P0DP58 116 aa12.49□□□□□ -0.41
TUBB4B-201ENST00000340384 IAPPP10997 89 aa12.49□□□□□ -0.41
TUBB4B-201ENST00000340384 TMEM217Q8N7C4 229 aa12.49□□□□□ -0.41
TUBB4B-201ENST00000340384 OR4S2Q8NH73 311 aa12.49□□□□□ -0.41
TUBB4B-201ENST00000340384 CCL19Q99731 98 aa12.49□□□□□ -0.41
TUBB4B-201ENST00000340384 RBKSQ9H477 322 aa12.49□□□□□ -0.41
TUBB4B-201ENST00000340384 KAAG1Q9UBP8 84 aa12.49□□□□□ -0.41
TUBB4B-201ENST00000340384 RPUSD1Q9UJJ7 312 aaKnown RBP12.49□□□□□ -0.41
TUBB4B-201ENST00000340384 RBMXL2O75526 392 aaKnown RBP12.48□□□□□ -0.41
TUBB4B-201ENST00000340384 COL8A2P25067 703 aa12.48□□□□□ -0.41
TUBB4B-201ENST00000340384 NFYBP25208 207 aa12.48□□□□□ -0.41
TUBB4B-201ENST00000340384 RPL31P62899 125 aaKnown RBP12.48□□□□□ -0.41
TUBB4B-201ENST00000340384 NCR3LG1Q68D85 454 aa12.48□□□□□ -0.41
TUBB4B-201ENST00000340384 DUX4L9Q6RFH8 374 aaPredicted RBP12.48□□□□□ -0.41
TUBB4B-201ENST00000340384 BTNL8Q6UX41 500 aa12.48□□□□□ -0.41
TUBB4B-201ENST00000340384 BPIFCQ8NFQ6 507 aa12.48□□□□□ -0.41
TUBB4B-201ENST00000340384 OR2G3Q8NGZ4 309 aa12.48□□□□□ -0.41
TUBB4B-201ENST00000340384 SCGB1C1Q8TD33 95 aa12.48□□□□□ -0.41
TUBB4B-201ENST00000340384 ZNF714Q96N38 554 aa12.48□□□□□ -0.41
TUBB4B-201ENST00000340384 CLCC1Q96S66 551 aa12.48□□□□□ -0.41
TUBB4B-201ENST00000340384 FSTL3O95633 263 aa12.48□□□□□ -0.41
TUBB4B-201ENST00000340384 TSPAN15O95858 294 aa12.48□□□□□ -0.41
TUBB4B-201ENST00000340384 IGHV4-39P01824 125 aa12.48□□□□□ -0.41
TUBB4B-201ENST00000340384 NQO2P16083 231 aa12.48□□□□□ -0.41
TUBB4B-201ENST00000340384 ATP6V0CP27449 155 aa12.48□□□□□ -0.41
TUBB4B-201ENST00000340384 BRWD1-AS2P59051 145 aa12.48□□□□□ -0.41
TUBB4B-201ENST00000340384 MRPS11P82912 194 aaKnown RBP12.48□□□□□ -0.41
TUBB4B-201ENST00000340384 TMEM267Q0VDI3 215 aaPredicted RBP12.48□□□□□ -0.41
TUBB4B-201ENST00000340384 TUSC1Q2TAM9 212 aa12.48□□□□□ -0.41
TUBB4B-201ENST00000340384 CT45A1Q5HYN5 189 aa12.48□□□□□ -0.41
TUBB4B-201ENST00000340384 DPPA3Q6W0C5 159 aa12.48□□□□□ -0.41
TUBB4B-201ENST00000340384 TCF23Q7RTU1 214 aa12.48□□□□□ -0.41
TUBB4B-201ENST00000340384 LILRB2Q8N423 598 aa12.48□□□□□ -0.41
TUBB4B-201ENST00000340384 ZNF439Q8NDP4 499 aa12.48□□□□□ -0.41
TUBB4B-201ENST00000340384 LFNGQ8NES3 379 aa12.48□□□□□ -0.41
TUBB4B-201ENST00000340384 CT45A3Q8NHU0 189 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms