RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 MEGF10Q96KG7 1140 aa12.44□□□□□ -0.42
RET-201ENST00000340058 SGK494Q96LW2 274 aa12.44□□□□□ -0.42
RET-201ENST00000340058 HS3ST6Q96QI5 342 aa12.44□□□□□ -0.42
RET-201ENST00000340058 SEC11CQ9BY50 192 aa12.44□□□□□ -0.42
RET-201ENST00000340058 TMEM140Q9NV12 185 aa12.44□□□□□ -0.42
RET-201ENST00000340058 MFSD2BA6NFX1 497 aa12.43□□□□□ -0.42
RET-201ENST00000340058 IL18BPO95998 194 aa12.43□□□□□ -0.42
RET-201ENST00000340058 SPP1P10451 314 aa12.43□□□□□ -0.42
RET-201ENST00000340058 SUMO1P63165 101 aaKnown RBP12.43□□□□□ -0.42
RET-201ENST00000340058 RNF126Q9BV68 326 aa12.43□□□□□ -0.42
RET-201ENST00000340058 TANC1Q9C0D5 1861 aa12.43□□□□□ -0.42
RET-201ENST00000340058 A0A1W2PN81 502 aa12.43□□□□□ -0.42
RET-201ENST00000340058 OR10J1P30954 320 aa12.43□□□□□ -0.42
RET-201ENST00000340058 GLRXP35754 106 aa12.43□□□□□ -0.42
RET-201ENST00000340058 ATP6V1FQ16864 119 aa12.43□□□□□ -0.42
RET-201ENST00000340058 ZNF645Q8N7E2 425 aa12.43□□□□□ -0.42
RET-201ENST00000340058 KDF1Q8NAX2 398 aaPredicted RBP12.43□□□□□ -0.42
RET-201ENST00000340058 ZNF785A8K8V0 405 aa12.43□□□□□ -0.42
RET-201ENST00000340058 FABP1P07148 127 aa12.43□□□□□ -0.42
RET-201ENST00000340058 B3GALT5-AS1P59052 145 aa12.43□□□□□ -0.42
RET-201ENST00000340058 ACP7Q6ZNF0 438 aa12.43□□□□□ -0.42
RET-201ENST00000340058 SLC24A4Q8NFF2 622 aa12.43□□□□□ -0.42
RET-201ENST00000340058 TMPRSS5Q9H3S3 457 aa12.43□□□□□ -0.42
RET-201ENST00000340058 SEBOXQ9HB31 216 aaPredicted RBP12.43□□□□□ -0.42
RET-201ENST00000340058 MYO9AB2RTY4 2548 aa12.43□□□□□ -0.42
RET-201ENST00000340058 C5orf42Q9H799 3197 aa12.43□□□□□ -0.42
RET-201ENST00000340058 TRAV24A0A0B4J272 114 aa12.43□□□□□ -0.42
RET-201ENST00000340058 CHEK1O14757 476 aa12.43□□□□□ -0.42
RET-201ENST00000340058 PITX3O75364 302 aa12.43□□□□□ -0.42
RET-201ENST00000340058 HPRT1P00492 218 aa12.43□□□□□ -0.42
RET-201ENST00000340058 CD40P25942 277 aa12.43□□□□□ -0.42
RET-201ENST00000340058 GNG4P50150 75 aa12.43□□□□□ -0.42
RET-201ENST00000340058 TNFRSF9Q07011 255 aa12.43□□□□□ -0.42
RET-201ENST00000340058 DHRS11Q6UWP2 260 aa12.43□□□□□ -0.42
RET-201ENST00000340058 ZBTB34Q8NCN2 500 aa12.43□□□□□ -0.42
RET-201ENST00000340058 EAF1Q96JC9 268 aaPredicted RBP12.43□□□□□ -0.42
RET-201ENST00000340058 RPRMQ9NS64 109 aa12.43□□□□□ -0.42
RET-201ENST00000340058 NAT8BQ9UHF3 227 aa12.43□□□□□ -0.42
RET-201ENST00000340058 VAX2Q9UIW0 290 aa12.43□□□□□ -0.42
RET-201ENST00000340058 SLC45A2Q9UMX9 530 aa12.43□□□□□ -0.42
RET-201ENST00000340058 GAPDHP04406 335 aaKnown RBP12.42□□□□□ -0.42
RET-201ENST00000340058 CTRB1P17538 263 aa12.42□□□□□ -0.42
RET-201ENST00000340058 BSPH1Q075Z2 132 aa12.42□□□□□ -0.42
RET-201ENST00000340058 OR5I1Q13606 314 aa12.42□□□□□ -0.42
RET-201ENST00000340058 TIMM23BQ5SRD1 257 aa12.42□□□□□ -0.42
RET-201ENST00000340058 CTRB2Q6GPI1 263 aa12.42□□□□□ -0.42
RET-201ENST00000340058 SAXO1Q8IYX7 474 aa12.42□□□□□ -0.42
RET-201ENST00000340058 TAF15Q92804 592 aaKnown RBP eCLIP12.42□□□□□ -0.42
RET-201ENST00000340058 CLEC5AQ9NY25 188 aa12.42□□□□□ -0.42
RET-201ENST00000340058 RAXQ9Y2V3 346 aa12.42□□□□□ -0.42
RET-201ENST00000340058 KIAA1324LA8MWY0 1029 aaPredicted RBP12.42□□□□□ -0.42
RET-201ENST00000340058 PTBP3O95758 552 aaKnown RBP12.42□□□□□ -0.42
RET-201ENST00000340058 NAT1P18440 290 aa12.42□□□□□ -0.42
RET-201ENST00000340058 CCL1P22362 96 aa12.42□□□□□ -0.42
RET-201ENST00000340058 NTF4P34130 210 aa12.42□□□□□ -0.42
RET-201ENST00000340058 RANP62826 216 aaKnown RBP12.42□□□□□ -0.42
RET-201ENST00000340058 OR1L8Q8NGR8 309 aa12.42□□□□□ -0.42
RET-201ENST00000340058 LYRM2Q9NU23 88 aaPredicted RBP12.42□□□□□ -0.42
RET-201ENST00000340058 GAR1Q9NY12 217 aaKnown RBP12.42□□□□□ -0.42
RET-201ENST00000340058 IGHV3OR16-10A0A075B7F0 116 aa12.42□□□□□ -0.42
RET-201ENST00000340058 CCL3L1P16619 93 aa12.42□□□□□ -0.42
RET-201ENST00000340058 PMCHP20382 165 aa12.42□□□□□ -0.42
RET-201ENST00000340058 FAM166AQ6J272 317 aa12.42□□□□□ -0.42
RET-201ENST00000340058 FAM89BQ8N5H3 189 aa12.42□□□□□ -0.42
RET-201ENST00000340058 VSTM2AQ8TAG5 236 aa12.42□□□□□ -0.42
RET-201ENST00000340058 J3KRW8 73 aa12.41□□□□□ -0.42
RET-201ENST00000340058 MMP7P09237 267 aaPredicted RBP12.41□□□□□ -0.42
RET-201ENST00000340058 KRTDAPP60985 99 aa12.41□□□□□ -0.42
RET-201ENST00000340058 PAX5Q02548 391 aa12.41□□□□□ -0.42
RET-201ENST00000340058 TEPPQ6URK8 271 aa12.41□□□□□ -0.42
RET-201ENST00000340058 RAB24Q969Q5 203 aa12.41□□□□□ -0.42
RET-201ENST00000340058 FKBP11Q9NYL4 201 aa12.41□□□□□ -0.42
RET-201ENST00000340058 PRNDQ9UKY0 176 aa12.41□□□□□ -0.42
RET-201ENST00000340058 TRAPPC1Q9Y5R8 145 aa12.41□□□□□ -0.42
RET-201ENST00000340058 RFNGQ9Y644 331 aa12.41□□□□□ -0.42
RET-201ENST00000340058 DBX1A6NMT0 343 aa12.41□□□□□ -0.42
RET-201ENST00000340058 HSBP1L1C9JCN9 74 aa12.41□□□□□ -0.42
RET-201ENST00000340058 GPR6P46095 362 aaPredicted RBP12.41□□□□□ -0.42
RET-201ENST00000340058 LINC00205P59089 165 aa12.41□□□□□ -0.42
RET-201ENST00000340058 BIVMQ86UB2 503 aa12.41□□□□□ -0.42
RET-201ENST00000340058 PXMP4Q9Y6I8 212 aa12.41□□□□□ -0.42
RET-201ENST00000340058 NCOA6Q14686 2063 aaPredicted RBP12.41□□□□□ -0.42
RET-201ENST00000340058 RND3P61587 244 aa12.41□□□□□ -0.42
RET-201ENST00000340058 ZNF273Q14593 569 aa12.41□□□□□ -0.42
RET-201ENST00000340058 WDR25Q64LD2 544 aaPredicted RBP12.41□□□□□ -0.42
RET-201ENST00000340058 LDLRAD3Q86YD5 345 aa12.41□□□□□ -0.42
RET-201ENST00000340058 NUDT16L1Q9BRJ7 211 aaKnown RBP12.41□□□□□ -0.42
RET-201ENST00000340058 PROK2Q9HC23 129 aa12.41□□□□□ -0.42
RET-201ENST00000340058 PLXNA2O75051 1894 aa12.4□□□□□ -0.42
RET-201ENST00000340058 NDUFB4O95168 129 aa12.4□□□□□ -0.42
RET-201ENST00000340058 ECSCRQ19T08 205 aa12.4□□□□□ -0.42
RET-201ENST00000340058 MRPL54Q6P161 138 aaKnown RBP12.4□□□□□ -0.42
RET-201ENST00000340058 MRGPRGQ86SM5 289 aa12.4□□□□□ -0.42
RET-201ENST00000340058 AP1S3Q96PC3 154 aa12.4□□□□□ -0.42
RET-201ENST00000340058 SFXN3Q9BWM7 321 aa12.4□□□□□ -0.42
RET-201ENST00000340058 COA4Q9NYJ1 87 aa12.4□□□□□ -0.42
RET-201ENST00000340058 S4R3C0 116 aa12.4□□□□□ -0.42
RET-201ENST00000340058 HOXB1P14653 301 aaPredicted RBP12.4□□□□□ -0.42
RET-201ENST00000340058 KIR2DS2P43631 304 aa12.4□□□□□ -0.42
RET-201ENST00000340058 PEAR1Q5VY43 1037 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms