RNA–Protein interactions for RNA: ENST00000339997.8

RTN3-202, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-202ENST00000339997 MS4A18H0YCH9 400 aa7.49□□□□□ -1.21
RTN3-202ENST00000339997 ISLRO14498 428 aa7.49□□□□□ -1.21
RTN3-202ENST00000339997 PITX3O75364 302 aa7.49□□□□□ -1.21
RTN3-202ENST00000339997 NDUFS6O75380 124 aaKnown RBP7.49□□□□□ -1.21
RTN3-202ENST00000339997 PGLYRP1O75594 196 aaPredicted RBP7.49□□□□□ -1.21
RTN3-202ENST00000339997 NXPH1P58417 271 aa7.49□□□□□ -1.21
RTN3-202ENST00000339997 EGR4Q05215 589 aa7.49□□□□□ -1.21
RTN3-202ENST00000339997 MS4A18Q3C1V0 323 aa7.49□□□□□ -1.21
RTN3-202ENST00000339997 GFI1BQ5VTD9 330 aa7.49□□□□□ -1.21
RTN3-202ENST00000339997 GLRX5Q86SX6 157 aa7.49□□□□□ -1.21
RTN3-202ENST00000339997 AQP10Q96PS8 301 aa7.49□□□□□ -1.21
RTN3-202ENST00000339997 IGHV3OR16-8A0A075B7F1 116 aa7.48□□□□□ -1.21
RTN3-202ENST00000339997 PDE6DO43924 150 aa7.48□□□□□ -1.21
RTN3-202ENST00000339997 CXorf1O96002 111 aa7.48□□□□□ -1.21
RTN3-202ENST00000339997 HBZP02008 142 aa7.48□□□□□ -1.21
RTN3-202ENST00000339997 PLP1P60201 277 aa7.48□□□□□ -1.21
RTN3-202ENST00000339997 SPEM2Q0P670 501 aa7.48□□□□□ -1.21
RTN3-202ENST00000339997 EIF4E3Q8N5X7 224 aaKnown RBP7.48□□□□□ -1.21
RTN3-202ENST00000339997 AQP3Q92482 292 aa7.48□□□□□ -1.21
RTN3-202ENST00000339997 SSC5DA1L4H1 1573 aa7.48□□□□□ -1.21
RTN3-202ENST00000339997 DOCK8Q8NF50 2099 aa7.48□□□□□ -1.21
RTN3-202ENST00000339997 PGPEP1LA6NFU8 196 aa7.48□□□□□ -1.21
RTN3-202ENST00000339997 A8MXK9 166 aa7.48□□□□□ -1.21
RTN3-202ENST00000339997 GAPDHP04406 335 aaKnown RBP7.48□□□□□ -1.21
RTN3-202ENST00000339997 ARL14EPLP0DKL9 152 aa7.48□□□□□ -1.21
RTN3-202ENST00000339997 BTCP35070 178 aa7.48□□□□□ -1.21
RTN3-202ENST00000339997 CSRP3P50461 194 aa7.48□□□□□ -1.21
RTN3-202ENST00000339997 GGTLC2Q14390 218 aa7.48□□□□□ -1.21
RTN3-202ENST00000339997 IGFBP7Q16270 282 aa7.48□□□□□ -1.21
RTN3-202ENST00000339997 ISXQ2M1V0 245 aa7.48□□□□□ -1.21
RTN3-202ENST00000339997 TDHQ8IZJ6 230 aa7.48□□□□□ -1.21
RTN3-202ENST00000339997 DEFB123Q8N688 67 aa7.48□□□□□ -1.21
RTN3-202ENST00000339997 CCL13Q99616 98 aa7.48□□□□□ -1.21
RTN3-202ENST00000339997 ANGPTL4Q9BY76 406 aa7.48□□□□□ -1.21
RTN3-202ENST00000339997 COA4Q9NYJ1 87 aa7.48□□□□□ -1.21
RTN3-202ENST00000339997 DOCK11Q5JSL3 2073 aa7.48□□□□□ -1.21
RTN3-202ENST00000339997 MIA3Q5JRA6 1907 aa7.48□□□□□ -1.21
RTN3-202ENST00000339997 CACNA1AO00555 2505 aa7.48□□□□□ -1.21
RTN3-202ENST00000339997 PGPA6NDG6 321 aa7.48□□□□□ -1.21
RTN3-202ENST00000339997 OOEPA6NGQ2 149 aa7.48□□□□□ -1.21
RTN3-202ENST00000339997 J3QT63 122 aa7.48□□□□□ -1.21
RTN3-202ENST00000339997 CD74P04233 296 aa7.48□□□□□ -1.21
RTN3-202ENST00000339997 DANCRP0C864 163 aa7.48□□□□□ -1.21
RTN3-202ENST00000339997 CD33P20138 364 aa7.48□□□□□ -1.21
RTN3-202ENST00000339997 COL10A1Q03692 680 aa7.48□□□□□ -1.21
RTN3-202ENST00000339997 PLPPR5Q32ZL2 321 aa7.48□□□□□ -1.21
RTN3-202ENST00000339997 SLC22A18ASQ8N1D0 253 aa7.48□□□□□ -1.21
RTN3-202ENST00000339997 LINC00469Q8N7U9 141 aa7.48□□□□□ -1.21
RTN3-202ENST00000339997 DMRT1Q9Y5R6 373 aa7.48□□□□□ -1.21
RTN3-202ENST00000339997 RFNGQ9Y644 331 aa7.48□□□□□ -1.21
RTN3-202ENST00000339997 S4R3C0 116 aa7.48□□□□□ -1.21
RTN3-202ENST00000339997 TRAV14DV4A0A0A6YYC5 116 aa7.47□□□□□ -1.21
RTN3-202ENST00000339997 LINC00869P0C866 280 aa7.47□□□□□ -1.21
RTN3-202ENST00000339997 NUBP1P53384 320 aa7.47□□□□□ -1.21
RTN3-202ENST00000339997 RNPS1Q15287 305 aaKnown RBP7.47□□□□□ -1.21
RTN3-202ENST00000339997 BIVMQ86UB2 503 aa7.47□□□□□ -1.21
RTN3-202ENST00000339997 SPAG8Q99932 426 aaPredicted RBP7.47□□□□□ -1.21
RTN3-202ENST00000339997 IL19Q9UHD0 177 aa7.47□□□□□ -1.21
RTN3-202ENST00000339997 AUP1Q9Y679 476 aa7.47□□□□□ -1.21
RTN3-202ENST00000339997 KLF7O75840 302 aaPredicted RBP7.47□□□□□ -1.21
RTN3-202ENST00000339997 LEPROTL1O95214 131 aa7.47□□□□□ -1.21
RTN3-202ENST00000339997 PHF3Q92576 2039 aaKnown RBP7.47□□□□□ -1.21
RTN3-202ENST00000339997 IGSF23A1L1A6 192 aa7.47□□□□□ -1.21
RTN3-202ENST00000339997 TNFSF14O43557 240 aa7.47□□□□□ -1.21
RTN3-202ENST00000339997 OR2H2O95918 312 aa7.47□□□□□ -1.21
RTN3-202ENST00000339997 PRB3Q04118 309 aaPredicted RBP7.47□□□□□ -1.21
RTN3-202ENST00000339997 SFRP2Q96HF1 295 aa7.47□□□□□ -1.21
RTN3-202ENST00000339997 OR8B2Q96RD0 313 aa7.47□□□□□ -1.21
RTN3-202ENST00000339997 RASL11BQ9BPW5 248 aa7.47□□□□□ -1.21
RTN3-202ENST00000339997 PAXXQ9BUH6 204 aa7.47□□□□□ -1.21
RTN3-202ENST00000339997 SAP30LQ9HAJ7 183 aa7.47□□□□□ -1.21
RTN3-202ENST00000339997 HILPDAQ9Y5L2 63 aa7.47□□□□□ -1.21
RTN3-202ENST00000339997 MED13Q9UHV7 2174 aa7.47□□□□□ -1.21
RTN3-202ENST00000339997 TRBV5-7A0A0A0MS05 114 aa7.47□□□□□ -1.21
RTN3-202ENST00000339997 STAG3L3P0CL85 134 aa7.47□□□□□ -1.21
RTN3-202ENST00000339997 EPHA8P29322 1005 aaPredicted RBP7.47□□□□□ -1.21
RTN3-202ENST00000339997 HERPUD1Q15011 391 aa7.47□□□□□ -1.21
RTN3-202ENST00000339997 PEAR1Q5VY43 1037 aaPredicted RBP7.47□□□□□ -1.21
RTN3-202ENST00000339997 RBPMS2Q6ZRY4 209 aaKnown RBP7.47□□□□□ -1.21
RTN3-202ENST00000339997 TCF23Q7RTU1 214 aa7.47□□□□□ -1.21
RTN3-202ENST00000339997 DEFB124Q8NES8 71 aa7.47□□□□□ -1.21
RTN3-202ENST00000339997 CT55Q8WUE5 264 aa7.47□□□□□ -1.21
RTN3-202ENST00000339997 C18orf15Q96N68 181 aa7.47□□□□□ -1.21
RTN3-202ENST00000339997 MESP1Q9BRJ9 268 aa7.47□□□□□ -1.21
RTN3-202ENST00000339997 G6PC2Q9NQR9 355 aa7.47□□□□□ -1.21
RTN3-202ENST00000339997 INSIG2Q9Y5U4 225 aa7.47□□□□□ -1.21
RTN3-202ENST00000339997 TET1Q8NFU7 2136 aa7.46□□□□□ -1.21
RTN3-202ENST00000339997 GDF9O60383 454 aa7.46□□□□□ -1.21
RTN3-202ENST00000339997 GREM1O60565 184 aa7.46□□□□□ -1.21
RTN3-202ENST00000339997 TSPAN2O60636 221 aa7.46□□□□□ -1.21
RTN3-202ENST00000339997 S1PR2O95136 353 aa7.46□□□□□ -1.21
RTN3-202ENST00000339997 GATA2P23769 480 aaPredicted RBP7.46□□□□□ -1.21
RTN3-202ENST00000339997 MFAP4P55083 255 aa7.46□□□□□ -1.21
RTN3-202ENST00000339997 SERF2P84101 59 aa7.46□□□□□ -1.21
RTN3-202ENST00000339997 MMDQ15546 238 aa7.46□□□□□ -1.21
RTN3-202ENST00000339997 SLC25A53Q5H9E4 307 aa7.46□□□□□ -1.21
RTN3-202ENST00000339997 OR51G1Q8NGK1 321 aa7.46□□□□□ -1.21
RTN3-202ENST00000339997 Q8WTZ3 238 aa7.46□□□□□ -1.21
RTN3-202ENST00000339997 DMRTA2Q96SC8 542 aa7.46□□□□□ -1.21
RTN3-202ENST00000339997 KCNK17Q96T54 332 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms