RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 TMEM208Q9BTX3 173 aa15.77■□□□□ 0.12
PSPC1-201ENST00000338910 NAGKQ9UJ70 344 aa15.77■□□□□ 0.12
PSPC1-201ENST00000338910 DLEU1O43261 78 aa15.77■□□□□ 0.11
PSPC1-201ENST00000338910 MBP02144 154 aa15.77■□□□□ 0.11
PSPC1-201ENST00000338910 GYPAP02724 150 aa15.77■□□□□ 0.11
PSPC1-201ENST00000338910 FGF12P61328 243 aa15.77■□□□□ 0.11
PSPC1-201ENST00000338910 TESK1Q15569 626 aa15.77■□□□□ 0.11
PSPC1-201ENST00000338910 ZNF324BQ6AW86 544 aaPredicted RBP15.77■□□□□ 0.11
PSPC1-201ENST00000338910 MKXQ8IYA7 352 aa15.77■□□□□ 0.11
PSPC1-201ENST00000338910 C9orf106Q8NAJ2 232 aa15.77■□□□□ 0.11
PSPC1-201ENST00000338910 OR2W1Q9Y3N9 320 aa15.77■□□□□ 0.11
PSPC1-201ENST00000338910 RP1L1Q8IWN7 2480 aaPredicted RBP15.76■□□□□ 0.11
PSPC1-201ENST00000338910 LCN2P80188 198 aa15.76■□□□□ 0.11
PSPC1-201ENST00000338910 VWA1Q6PCB0 445 aa15.76■□□□□ 0.11
PSPC1-201ENST00000338910 SVIPQ8NHG7 77 aa15.76■□□□□ 0.11
PSPC1-201ENST00000338910 TIMM9Q9Y5J7 89 aa15.76■□□□□ 0.11
PSPC1-201ENST00000338910 PIEZO2Q9H5I5 2752 aa15.76■□□□□ 0.11
PSPC1-201ENST00000338910 UBE2L5PA0A1B0GUS4 154 aa15.76■□□□□ 0.11
PSPC1-201ENST00000338910 WNT2P09544 360 aa15.76■□□□□ 0.11
PSPC1-201ENST00000338910 RPL15P61313 204 aaKnown RBP15.76■□□□□ 0.11
PSPC1-201ENST00000338910 BTNL3Q6UXE8 466 aa15.76■□□□□ 0.11
PSPC1-201ENST00000338910 SAXO1Q8IYX7 474 aa15.76■□□□□ 0.11
PSPC1-201ENST00000338910 OR4F5Q8NH21 305 aa15.76■□□□□ 0.11
PSPC1-201ENST00000338910 OR4F4Q96R69 305 aa15.76■□□□□ 0.11
PSPC1-201ENST00000338910 M0QZK8 103 aa15.75■□□□□ 0.11
PSPC1-201ENST00000338910 HMGB3O15347 200 aaKnown RBP15.75■□□□□ 0.11
PSPC1-201ENST00000338910 IGKV1-5P01602 117 aa15.75■□□□□ 0.11
PSPC1-201ENST00000338910 OR10J1P30954 320 aa15.75■□□□□ 0.11
PSPC1-201ENST00000338910 KIR2DL2P43627 348 aaPredicted RBP15.75■□□□□ 0.11
PSPC1-201ENST00000338910 GAGE1Q13065 139 aa15.75■□□□□ 0.11
PSPC1-201ENST00000338910 ACSM6Q6P461 480 aa15.75■□□□□ 0.11
PSPC1-201ENST00000338910 Q6ZT83 130 aa15.75■□□□□ 0.11
PSPC1-201ENST00000338910 MRPL52Q86TS9 123 aaKnown RBP15.75■□□□□ 0.11
PSPC1-201ENST00000338910 GATAD1Q8WUU5 269 aa15.75■□□□□ 0.11
PSPC1-201ENST00000338910 SARAFQ96BY9 339 aa15.75■□□□□ 0.11
PSPC1-201ENST00000338910 OR2J1Q9GZK6 312 aa15.75■□□□□ 0.11
PSPC1-201ENST00000338910 GOLT1BQ9Y3E0 138 aa15.75■□□□□ 0.11
PSPC1-201ENST00000338910 MPC1Q9Y5U8 109 aa15.75■□□□□ 0.11
PSPC1-201ENST00000338910 GTF3C1Q12789 2109 aa15.75■□□□□ 0.11
PSPC1-201ENST00000338910 K7EM74 188 aa15.75■□□□□ 0.11
PSPC1-201ENST00000338910 VENTXO95231 258 aa15.75■□□□□ 0.11
PSPC1-201ENST00000338910 IL3RAP26951 378 aa15.75■□□□□ 0.11
PSPC1-201ENST00000338910 RPL29P47914 159 aaKnown RBP15.75■□□□□ 0.11
PSPC1-201ENST00000338910 FOXF2Q12947 444 aa15.75■□□□□ 0.11
PSPC1-201ENST00000338910 FOXC1Q12948 553 aa15.75■□□□□ 0.11
PSPC1-201ENST00000338910 GABRA6Q16445 453 aa15.75■□□□□ 0.11
PSPC1-201ENST00000338910 KCNIP4Q6PIL6 250 aa15.75■□□□□ 0.11
PSPC1-201ENST00000338910 IGFL3Q6UXB1 125 aa15.75■□□□□ 0.11
PSPC1-201ENST00000338910 ZNF573Q86YE8 665 aa15.75■□□□□ 0.11
PSPC1-201ENST00000338910 TMEM256Q8N2U0 113 aa15.75■□□□□ 0.11
PSPC1-201ENST00000338910 NEK7Q8TDX7 302 aa15.75■□□□□ 0.11
PSPC1-201ENST00000338910 IMMP2LQ96T52 175 aa15.75■□□□□ 0.11
PSPC1-201ENST00000338910 SLC25A22Q9H936 323 aa15.75■□□□□ 0.11
PSPC1-201ENST00000338910 BSNQ9UPA5 3926 aa15.74■□□□□ 0.11
PSPC1-201ENST00000338910 CTXND1A0A1B0GTU2 59 aa15.74■□□□□ 0.11
PSPC1-201ENST00000338910 SLC38A11Q08AI6 406 aa15.74■□□□□ 0.11
PSPC1-201ENST00000338910 SPANXN5Q5MJ07 72 aa15.74■□□□□ 0.11
PSPC1-201ENST00000338910 C20orf204Q6ZNR8 217 aa15.74■□□□□ 0.11
PSPC1-201ENST00000338910 MANBALQ9NQG1 85 aa15.74■□□□□ 0.11
PSPC1-201ENST00000338910 RHBDL1O75783 438 aa15.74■□□□□ 0.11
PSPC1-201ENST00000338910 AGFG2O95081 481 aa15.74■□□□□ 0.11
PSPC1-201ENST00000338910 CRYABP02511 175 aaKnown RBP15.74■□□□□ 0.11
PSPC1-201ENST00000338910 RPLP1P05386 114 aaKnown RBP15.74■□□□□ 0.11
PSPC1-201ENST00000338910 OR3A1P47881 315 aa15.74■□□□□ 0.11
PSPC1-201ENST00000338910 PPP1CBP62140 327 aa15.74■□□□□ 0.11
PSPC1-201ENST00000338910 GNG3P63215 75 aa15.74■□□□□ 0.11
PSPC1-201ENST00000338910 MRPL49Q13405 166 aaKnown RBP15.74■□□□□ 0.11
PSPC1-201ENST00000338910 ERRFI1Q9UJM3 462 aaPredicted RBP15.74■□□□□ 0.11
PSPC1-201ENST00000338910 IGHV3-64DA0A0J9YX35 117 aa15.73■□□□□ 0.11
PSPC1-201ENST00000338910 A0A1B0GUS0 222 aa15.73■□□□□ 0.11
PSPC1-201ENST00000338910 NUPR1O60356 82 aa15.73■□□□□ 0.11
PSPC1-201ENST00000338910 GUSBP1Q15486 140 aa15.73■□□□□ 0.11
PSPC1-201ENST00000338910 MS4A10Q96PG2 267 aa15.73■□□□□ 0.11
PSPC1-201ENST00000338910 SMPD2O60906 423 aa15.73■□□□□ 0.11
PSPC1-201ENST00000338910 HPRT1P00492 218 aa15.73■□□□□ 0.11
PSPC1-201ENST00000338910 NPSP0C0P6 89 aa15.73■□□□□ 0.11
PSPC1-201ENST00000338910 ALKBH6Q3KRA9 238 aa15.73■□□□□ 0.11
PSPC1-201ENST00000338910 TMEM144Q7Z5S9 345 aa15.73■□□□□ 0.11
PSPC1-201ENST00000338910 OR10V1Q8NGI7 309 aa15.73■□□□□ 0.11
PSPC1-201ENST00000338910 OR10J5Q8NHC4 309 aa15.73■□□□□ 0.11
PSPC1-201ENST00000338910 OR5B21A6NL26 309 aa15.72■□□□□ 0.11
PSPC1-201ENST00000338910 HS3ST1O14792 307 aa15.72■□□□□ 0.11
PSPC1-201ENST00000338910 IGLV2-14P01704 120 aa15.72■□□□□ 0.11
PSPC1-201ENST00000338910 FAM78BQ5VT40 261 aa15.72■□□□□ 0.11
PSPC1-201ENST00000338910 NEIL1Q96FI4 390 aaPredicted RBP15.72■□□□□ 0.11
PSPC1-201ENST00000338910 TBX15Q96SF7 602 aa15.72■□□□□ 0.11
PSPC1-201ENST00000338910 RIMS4Q9H426 269 aaPredicted RBP15.72■□□□□ 0.11
PSPC1-201ENST00000338910 PXMP4Q9Y6I8 212 aa15.72■□□□□ 0.11
PSPC1-201ENST00000338910 PRR14LQ5THK1 2151 aa15.72■□□□□ 0.11
PSPC1-201ENST00000338910 ESPL1Q14674 2120 aa15.72■□□□□ 0.11
PSPC1-201ENST00000338910 INTS1Q8N201 2190 aaKnown RBP15.72■□□□□ 0.11
PSPC1-201ENST00000338910 A6NNC1 897 aa15.72■□□□□ 0.11
PSPC1-201ENST00000338910 MLNRO43193 412 aa15.72■□□□□ 0.11
PSPC1-201ENST00000338910 CHRNA7P36544 502 aa15.72■□□□□ 0.11
PSPC1-201ENST00000338910 TMEM14EPQ6UXP3 125 aa15.72■□□□□ 0.11
PSPC1-201ENST00000338910 Q6ZS92 163 aa15.72■□□□□ 0.11
PSPC1-201ENST00000338910 ZCCHC14Q8WYQ9 949 aaKnown RBP15.72■□□□□ 0.11
PSPC1-201ENST00000338910 TRAPPC1Q9Y5R8 145 aa15.72■□□□□ 0.11
PSPC1-201ENST00000338910 NPPCP23582 126 aa15.71■□□□□ 0.11
PSPC1-201ENST00000338910 GCH1P30793 250 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms