RNA–Protein interactions for RNA: ENST00000338784.8

TNFSF13-201, Transcript of TNF superfamily member 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,971 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-201ENST00000338784 TMPRSS5Q9H3S3 457 aa12.55□□□□□ -0.4
TNFSF13-201ENST00000338784 CTXND1A0A1B0GTU2 59 aa12.54□□□□□ -0.4
TNFSF13-201ENST00000338784 GPR12P47775 334 aa12.54□□□□□ -0.4
TNFSF13-201ENST00000338784 MEF2BQ02080 365 aaPredicted RBP12.54□□□□□ -0.4
TNFSF13-201ENST00000338784 LTC4SQ16873 150 aa12.54□□□□□ -0.4
TNFSF13-201ENST00000338784 VWC2Q2TAL6 325 aa12.54□□□□□ -0.4
TNFSF13-201ENST00000338784 DEFB109BQ30KR1 87 aa12.54□□□□□ -0.4
TNFSF13-201ENST00000338784 WDR25Q64LD2 544 aaPredicted RBP12.54□□□□□ -0.4
TNFSF13-201ENST00000338784 ZNF600Q6ZNG1 722 aa12.54□□□□□ -0.4
TNFSF13-201ENST00000338784 SLC25A15Q9Y619 301 aa12.54□□□□□ -0.4
TNFSF13-201ENST00000338784 SRRM5B3KS81 715 aa12.54□□□□□ -0.4
TNFSF13-201ENST00000338784 EGR1P18146 543 aa12.54□□□□□ -0.4
TNFSF13-201ENST00000338784 HOXA5P20719 270 aa12.54□□□□□ -0.4
TNFSF13-201ENST00000338784 PSMB3P49720 205 aa12.54□□□□□ -0.4
TNFSF13-201ENST00000338784 RND2P52198 227 aa12.54□□□□□ -0.4
TNFSF13-201ENST00000338784 CD81P60033 236 aa12.54□□□□□ -0.4
TNFSF13-201ENST00000338784 GNB2P62879 340 aa12.54□□□□□ -0.4
TNFSF13-201ENST00000338784 FFAR4Q5NUL3 377 aa12.54□□□□□ -0.4
TNFSF13-201ENST00000338784 FAM90A1Q86YD7 464 aa12.54□□□□□ -0.4
TNFSF13-201ENST00000338784 C1orf87Q8N0U7 546 aa12.54□□□□□ -0.4
TNFSF13-201ENST00000338784 ZNF709Q8N972 641 aa12.54□□□□□ -0.4
TNFSF13-201ENST00000338784 R3HDM4Q96D70 268 aa12.54□□□□□ -0.4
TNFSF13-201ENST00000338784 NPCDR1Q9BY65 106 aa12.54□□□□□ -0.4
TNFSF13-201ENST00000338784 SLC25A22Q9H936 323 aa12.54□□□□□ -0.4
TNFSF13-201ENST00000338784 NIT2Q9NQR4 276 aa12.54□□□□□ -0.4
TNFSF13-201ENST00000338784 GNG12Q9UBI6 72 aa12.54□□□□□ -0.4
TNFSF13-201ENST00000338784 DUSP13Q9UII6 198 aa12.54□□□□□ -0.4
TNFSF13-201ENST00000338784 IGKV1D-17A0A075B6S4 117 aa12.53□□□□□ -0.4
TNFSF13-201ENST00000338784 DUTP33316 252 aaKnown RBP12.53□□□□□ -0.4
TNFSF13-201ENST00000338784 RPS16P62249 146 aaKnown RBP12.53□□□□□ -0.4
TNFSF13-201ENST00000338784 TFF3Q07654 80 aa12.53□□□□□ -0.4
TNFSF13-201ENST00000338784 SPINK9Q5DT21 86 aa12.53□□□□□ -0.4
TNFSF13-201ENST00000338784 NCR3LG1Q68D85 454 aa12.53□□□□□ -0.4
TNFSF13-201ENST00000338784 OR13D1Q8NGV5 346 aa12.53□□□□□ -0.4
TNFSF13-201ENST00000338784 PPP1R35Q8TAP8 253 aa12.53□□□□□ -0.4
TNFSF13-201ENST00000338784 FAM210BQ96KR6 192 aa12.53□□□□□ -0.4
TNFSF13-201ENST00000338784 ACTR3CQ9C0K3 210 aaPredicted RBP12.53□□□□□ -0.4
TNFSF13-201ENST00000338784 CTDSP1Q9GZU7 261 aa12.53□□□□□ -0.4
TNFSF13-201ENST00000338784 DOK5Q9P104 306 aa12.53□□□□□ -0.4
TNFSF13-201ENST00000338784 JPT1Q9UK76 154 aa12.53□□□□□ -0.4
TNFSF13-201ENST00000338784 KIAA2026Q5HYC2 2103 aa12.53□□□□□ -0.4
TNFSF13-201ENST00000338784 MBD3L4A6NDZ8 208 aaPredicted RBP12.52□□□□□ -0.4
TNFSF13-201ENST00000338784 MBD3L3A6NE82 208 aaPredicted RBP12.52□□□□□ -0.4
TNFSF13-201ENST00000338784 MBD3L5A6NJ08 208 aaPredicted RBP12.52□□□□□ -0.4
TNFSF13-201ENST00000338784 C17orf112F2Z3M2 114 aa12.52□□□□□ -0.4
TNFSF13-201ENST00000338784 MGST3O14880 152 aa12.52□□□□□ -0.4
TNFSF13-201ENST00000338784 HMGB3O15347 200 aaKnown RBP12.52□□□□□ -0.4
TNFSF13-201ENST00000338784 YIF1AO95070 293 aa12.52□□□□□ -0.4
TNFSF13-201ENST00000338784 NDUFA6P56556 154 aa12.52□□□□□ -0.4
TNFSF13-201ENST00000338784 MORN2Q502X0 79 aa12.52□□□□□ -0.4
TNFSF13-201ENST00000338784 MBD3L2Q8NHZ7 208 aaPredicted RBP12.52□□□□□ -0.4
TNFSF13-201ENST00000338784 FAM216AQ8WUB2 273 aa12.52□□□□□ -0.4
TNFSF13-201ENST00000338784 SNX22Q96L94 193 aa12.52□□□□□ -0.4
TNFSF13-201ENST00000338784 SMIM7Q9BQ49 75 aa12.52□□□□□ -0.4
TNFSF13-201ENST00000338784 QTRT1Q9BXR0 403 aaKnown RBP12.52□□□□□ -0.4
TNFSF13-201ENST00000338784 NAT8Q9UHE5 227 aa12.52□□□□□ -0.4
TNFSF13-201ENST00000338784 LOC400499M0QZD8 3231 aa12.52□□□□□ -0.4
TNFSF13-201ENST00000338784 TMEM250H0YL14 139 aa12.52□□□□□ -0.41
TNFSF13-201ENST00000338784 HIST1H2BKO60814 126 aa12.52□□□□□ -0.41
TNFSF13-201ENST00000338784 FCGR3BO75015 233 aa12.52□□□□□ -0.41
TNFSF13-201ENST00000338784 HPRT1P00492 218 aa12.52□□□□□ -0.41
TNFSF13-201ENST00000338784 TRGC2P03986 189 aa12.52□□□□□ -0.41
TNFSF13-201ENST00000338784 HIST1H2BJP06899 126 aa12.52□□□□□ -0.41
TNFSF13-201ENST00000338784 HIST1H2BOP23527 126 aa12.52□□□□□ -0.41
TNFSF13-201ENST00000338784 HIST1H2BBP33778 126 aa12.52□□□□□ -0.41
TNFSF13-201ENST00000338784 CFHR2P36980 270 aa12.52□□□□□ -0.41
TNFSF13-201ENST00000338784 CDX1P47902 265 aaPredicted RBP12.52□□□□□ -0.41
TNFSF13-201ENST00000338784 HIST1H2BDP58876 126 aa12.52□□□□□ -0.41
TNFSF13-201ENST00000338784 HIST1H2BCP62807 126 aa12.52□□□□□ -0.41
TNFSF13-201ENST00000338784 HIST2H2BEQ16778 126 aa12.52□□□□□ -0.41
TNFSF13-201ENST00000338784 MAJINQ3KP22 176 aa12.52□□□□□ -0.41
TNFSF13-201ENST00000338784 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.52□□□□□ -0.41
TNFSF13-201ENST00000338784 IGF2-ASQ6U949 168 aa12.52□□□□□ -0.41
TNFSF13-201ENST00000338784 SEM1Q6ZVN7 128 aa12.52□□□□□ -0.41
TNFSF13-201ENST00000338784 LRP11Q86VZ4 500 aa12.52□□□□□ -0.41
TNFSF13-201ENST00000338784 HIST1H2BHQ93079 126 aa12.52□□□□□ -0.41
TNFSF13-201ENST00000338784 HIST1H2BNQ99877 126 aa12.52□□□□□ -0.41
TNFSF13-201ENST00000338784 HIST1H2BMQ99879 126 aa12.52□□□□□ -0.41
TNFSF13-201ENST00000338784 MANBALQ9NQG1 85 aa12.52□□□□□ -0.41
TNFSF13-201ENST00000338784 SPENQ96T58 3664 aaKnown RBP12.51□□□□□ -0.41
TNFSF13-201ENST00000338784 FAM90A9PA6NNJ1 464 aa12.51□□□□□ -0.41
TNFSF13-201ENST00000338784 YPEL1O60688 119 aa12.51□□□□□ -0.41
TNFSF13-201ENST00000338784 PROP1O75360 226 aa12.51□□□□□ -0.41
TNFSF13-201ENST00000338784 LY86O95711 162 aa12.51□□□□□ -0.41
TNFSF13-201ENST00000338784 OPN1MWP04001 364 aa12.51□□□□□ -0.41
TNFSF13-201ENST00000338784 FABP1P07148 127 aa12.51□□□□□ -0.41
TNFSF13-201ENST00000338784 OR9G9P0C7N8 305 aa12.51□□□□□ -0.41
TNFSF13-201ENST00000338784 OPN1MW2P0DN77 364 aa12.51□□□□□ -0.41
TNFSF13-201ENST00000338784 OPN1MW3P0DN78 364 aa12.51□□□□□ -0.41
TNFSF13-201ENST00000338784 MDKP21741 143 aaPredicted RBP12.51□□□□□ -0.41
TNFSF13-201ENST00000338784 ZNF83P51522 516 aa12.51□□□□□ -0.41
TNFSF13-201ENST00000338784 GTF3C1Q12789 2109 aa12.51□□□□□ -0.41
TNFSF13-201ENST00000338784 MSMPQ1L6U9 139 aa12.51□□□□□ -0.41
TNFSF13-201ENST00000338784 TMEM241Q24JQ0 296 aa12.51□□□□□ -0.41
TNFSF13-201ENST00000338784 AARDQ4LEZ3 155 aa12.51□□□□□ -0.41
TNFSF13-201ENST00000338784 CYP2G1PQ6ZSU1 146 aa12.51□□□□□ -0.41
TNFSF13-201ENST00000338784 ZADH2Q8N4Q0 377 aa12.51□□□□□ -0.41
TNFSF13-201ENST00000338784 GCSAMQ8N6F7 178 aa12.51□□□□□ -0.41
TNFSF13-201ENST00000338784 RAB24Q969Q5 203 aa12.51□□□□□ -0.41
TNFSF13-201ENST00000338784 PLPPR2Q96GM1 343 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms