RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 TMEM177Q53S58 311 aa10.25□□□□□ -0.77
NUDCD3-201ENST00000338427 H1FOOQ8IZA3 346 aaPredicted RBP10.25□□□□□ -0.77
NUDCD3-201ENST00000338427 POC5Q8NA72 575 aa10.25□□□□□ -0.77
NUDCD3-201ENST00000338427 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.25□□□□□ -0.77
NUDCD3-201ENST00000338427 HARBI1Q96MB7 349 aa10.25□□□□□ -0.77
NUDCD3-201ENST00000338427 OR51E2Q9H255 320 aa10.25□□□□□ -0.77
NUDCD3-201ENST00000338427 VCX3BQ9H321 246 aa10.25□□□□□ -0.77
NUDCD3-201ENST00000338427 RAB26Q9ULW5 256 aa10.25□□□□□ -0.77
NUDCD3-201ENST00000338427 DNAH7Q8WXX0 4024 aa10.24□□□□□ -0.77
NUDCD3-201ENST00000338427 TNCP24821 2201 aa10.24□□□□□ -0.77
NUDCD3-201ENST00000338427 METTL21EPA6NDL7 271 aa10.24□□□□□ -0.77
NUDCD3-201ENST00000338427 SPDEFO95238 335 aa10.24□□□□□ -0.77
NUDCD3-201ENST00000338427 PRH1P02810 166 aa10.24□□□□□ -0.77
NUDCD3-201ENST00000338427 PTHLHP12272 177 aa10.24□□□□□ -0.77
NUDCD3-201ENST00000338427 NFYAP23511 347 aaPredicted RBP10.24□□□□□ -0.77
NUDCD3-201ENST00000338427 PSMB9P28065 219 aa10.24□□□□□ -0.77
NUDCD3-201ENST00000338427 RPL30P62888 115 aaKnown RBP10.24□□□□□ -0.77
NUDCD3-201ENST00000338427 DCTN2Q13561 401 aaKnown RBP10.24□□□□□ -0.77
NUDCD3-201ENST00000338427 SRSF7Q16629 238 aaKnown RBP eCLIP10.24□□□□□ -0.77
NUDCD3-201ENST00000338427 UBE2UQ5VVX9 321 aa10.24□□□□□ -0.77
NUDCD3-201ENST00000338427 NUDCD2Q8WVJ2 157 aa10.24□□□□□ -0.77
NUDCD3-201ENST00000338427 DDB2Q92466 427 aa10.24□□□□□ -0.77
NUDCD3-201ENST00000338427 OR4C12Q96R67 309 aa10.24□□□□□ -0.77
NUDCD3-201ENST00000338427 GPHA2Q96T91 129 aa10.24□□□□□ -0.77
NUDCD3-201ENST00000338427 GINS4Q9BRT9 223 aa10.24□□□□□ -0.77
NUDCD3-201ENST00000338427 IGKV1D-13A0A0B4J2D9 117 aa10.23□□□□□ -0.77
NUDCD3-201ENST00000338427 C13orf42A0A1B0GVH6 325 aa10.23□□□□□ -0.77
NUDCD3-201ENST00000338427 SSX5O60225 188 aa10.23□□□□□ -0.77
NUDCD3-201ENST00000338427 ATP6V1G2O95670 118 aa10.23□□□□□ -0.77
NUDCD3-201ENST00000338427 CRYZL1O95825 349 aa10.23□□□□□ -0.77
NUDCD3-201ENST00000338427 FCER2P06734 321 aa10.23□□□□□ -0.77
NUDCD3-201ENST00000338427 FRMD6-AS1P0C7T7 363 aa10.23□□□□□ -0.77
NUDCD3-201ENST00000338427 IGKV1-13P0DP09 117 aa10.23□□□□□ -0.77
NUDCD3-201ENST00000338427 CD40LGP29965 261 aa10.23□□□□□ -0.77
NUDCD3-201ENST00000338427 HSPA13P48723 471 aa10.23□□□□□ -0.77
NUDCD3-201ENST00000338427 PITPNAQ00169 270 aa10.23□□□□□ -0.77
NUDCD3-201ENST00000338427 TNXAQ16473 311 aa10.23□□□□□ -0.77
NUDCD3-201ENST00000338427 OR2B11Q5JQS5 317 aa10.23□□□□□ -0.77
NUDCD3-201ENST00000338427 PYHIN1Q6K0P9 492 aa10.23□□□□□ -0.77
NUDCD3-201ENST00000338427 IL34Q6ZMJ4 242 aa10.23□□□□□ -0.77
NUDCD3-201ENST00000338427 Q8N1Y9 231 aa10.23□□□□□ -0.77
NUDCD3-201ENST00000338427 OR5H6Q8NGV6 325 aa10.23□□□□□ -0.77
NUDCD3-201ENST00000338427 RSRP1Q9BUV0 290 aa10.23□□□□□ -0.77
NUDCD3-201ENST00000338427 SLA2Q9H6Q3 261 aa10.23□□□□□ -0.77
NUDCD3-201ENST00000338427 DAPK2Q9UIK4 370 aa10.23□□□□□ -0.77
NUDCD3-201ENST00000338427 BLOC1S6Q9UL45 172 aa10.23□□□□□ -0.77
NUDCD3-201ENST00000338427 RRP15Q9Y3B9 282 aaKnown RBP10.23□□□□□ -0.77
NUDCD3-201ENST00000338427 TMEM235A6NFC5 223 aa10.22□□□□□ -0.77
NUDCD3-201ENST00000338427 NOTOA8MTQ0 251 aa10.22□□□□□ -0.77
NUDCD3-201ENST00000338427 IGLV2-14P01704 120 aa10.22□□□□□ -0.77
NUDCD3-201ENST00000338427 MXD1Q05195 221 aa10.22□□□□□ -0.77
NUDCD3-201ENST00000338427 DYRK1AQ13627 763 aa10.22□□□□□ -0.77
NUDCD3-201ENST00000338427 KLF5Q13887 457 aaPredicted RBP10.22□□□□□ -0.77
NUDCD3-201ENST00000338427 PRSS8Q16651 343 aa10.22□□□□□ -0.77
NUDCD3-201ENST00000338427 C10orf55Q5SWW7 151 aa10.22□□□□□ -0.77
NUDCD3-201ENST00000338427 C19orf35Q6ZS72 473 aa10.22□□□□□ -0.77
NUDCD3-201ENST00000338427 VKORC1L1Q8N0U8 176 aa10.22□□□□□ -0.77
NUDCD3-201ENST00000338427 TINAGL1Q9GZM7 467 aaPredicted RBP10.22□□□□□ -0.77
NUDCD3-201ENST00000338427 RANGRFQ9HD47 186 aaPredicted RBP10.22□□□□□ -0.77
NUDCD3-201ENST00000338427 COA4Q9NYJ1 87 aa10.22□□□□□ -0.77
NUDCD3-201ENST00000338427 FCGR3BO75015 233 aa10.21□□□□□ -0.77
NUDCD3-201ENST00000338427 TUSC2O75896 110 aa10.21□□□□□ -0.77
NUDCD3-201ENST00000338427 FGF9P31371 208 aaPredicted RBP10.21□□□□□ -0.77
NUDCD3-201ENST00000338427 SDC2P34741 201 aa10.21□□□□□ -0.77
NUDCD3-201ENST00000338427 SYNJ2BPP57105 145 aa10.21□□□□□ -0.77
NUDCD3-201ENST00000338427 BRWD1-AS2P59051 145 aa10.21□□□□□ -0.77
NUDCD3-201ENST00000338427 GABARAPL2P60520 117 aa10.21□□□□□ -0.77
NUDCD3-201ENST00000338427 RTL8BQ17RB0 113 aa10.21□□□□□ -0.77
NUDCD3-201ENST00000338427 HACD4Q5VWC8 232 aa10.21□□□□□ -0.77
NUDCD3-201ENST00000338427 Q6ZS49 121 aa10.21□□□□□ -0.77
NUDCD3-201ENST00000338427 TEX45Q8NA69 505 aa10.21□□□□□ -0.77
NUDCD3-201ENST00000338427 OR6Q1Q8NGQ2 317 aa10.21□□□□□ -0.77
NUDCD3-201ENST00000338427 PHB2Q99623 299 aa10.21□□□□□ -0.77
NUDCD3-201ENST00000338427 DCUN1D5Q9BTE7 237 aa10.21□□□□□ -0.77
NUDCD3-201ENST00000338427 ZNF430Q9H8G1 570 aaPredicted RBP10.21□□□□□ -0.77
NUDCD3-201ENST00000338427 IZUMO1RA6ND01 250 aa10.2□□□□□ -0.78
NUDCD3-201ENST00000338427 HMX3A6NHT5 357 aa10.2□□□□□ -0.78
NUDCD3-201ENST00000338427 E7EUB6 86 aa10.2□□□□□ -0.78
NUDCD3-201ENST00000338427 IGLV1-51P01701 117 aa10.2□□□□□ -0.78
NUDCD3-201ENST00000338427 HLA-DQB1P01920 261 aa10.2□□□□□ -0.78
NUDCD3-201ENST00000338427 MYOD1P15172 320 aa10.2□□□□□ -0.78
NUDCD3-201ENST00000338427 GALP22466 123 aa10.2□□□□□ -0.78
NUDCD3-201ENST00000338427 DTYMKP23919 212 aa10.2□□□□□ -0.78
NUDCD3-201ENST00000338427 RANBP1P43487 201 aa10.2□□□□□ -0.78
NUDCD3-201ENST00000338427 UBE2KP61086 200 aa10.2□□□□□ -0.78
NUDCD3-201ENST00000338427 ZNF45Q02386 682 aa10.2□□□□□ -0.78
NUDCD3-201ENST00000338427 ZNF343Q6P1L6 599 aa10.2□□□□□ -0.78
NUDCD3-201ENST00000338427 GVQW1Q8N7I0 195 aa10.2□□□□□ -0.78
NUDCD3-201ENST00000338427 DYNC2H1Q8NCM8 4307 aaKnown RBP10.2□□□□□ -0.78
NUDCD3-201ENST00000338427 ADAD2Q8NCV1 583 aaKnown RBP10.2□□□□□ -0.78
NUDCD3-201ENST00000338427 LGALS14Q8TCE9 139 aa10.2□□□□□ -0.78
NUDCD3-201ENST00000338427 SRSF12Q8WXF0 261 aaKnown RBP10.2□□□□□ -0.78
NUDCD3-201ENST00000338427 ACOT12Q8WYK0 555 aa10.2□□□□□ -0.78
NUDCD3-201ENST00000338427 RCHY1Q96PM5 261 aa10.2□□□□□ -0.78
NUDCD3-201ENST00000338427 ELOVL1Q9BW60 279 aa10.2□□□□□ -0.78
NUDCD3-201ENST00000338427 GAR1Q9NY12 217 aaKnown RBP10.2□□□□□ -0.78
NUDCD3-201ENST00000338427 PEF1Q9UBV8 284 aaKnown RBP10.2□□□□□ -0.78
NUDCD3-201ENST00000338427 STUB1Q9UNE7 303 aa10.2□□□□□ -0.78
NUDCD3-201ENST00000338427 SSR3Q9UNL2 185 aa10.2□□□□□ -0.78
NUDCD3-201ENST00000338427 OR2W1Q9Y3N9 320 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms