RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 HIGD1AQ9Y241 93 aa11.76□□□□□ -0.53
RTN4-202ENST00000337526 RBBP6Q7Z6E9 1792 aaKnown RBP11.76□□□□□ -0.53
RTN4-202ENST00000337526 A0A087WV48 116 aa11.76□□□□□ -0.53
RTN4-202ENST00000337526 DDTP30046 118 aa11.76□□□□□ -0.53
RTN4-202ENST00000337526 MC5RP33032 325 aa11.76□□□□□ -0.53
RTN4-202ENST00000337526 COL5A1-AS1Q5SY13 56 aa11.76□□□□□ -0.53
RTN4-202ENST00000337526 PRNTQ86SH4 94 aa11.76□□□□□ -0.53
RTN4-202ENST00000337526 RTBDNQ9BSG5 229 aaPredicted RBP11.76□□□□□ -0.53
RTN4-202ENST00000337526 SLC25A33Q9BSK2 321 aa11.76□□□□□ -0.53
RTN4-202ENST00000337526 CHCHD2Q9Y6H1 151 aaPredicted RBP11.76□□□□□ -0.53
RTN4-202ENST00000337526 IGKV3-7A0A075B6H7 116 aa11.75□□□□□ -0.53
RTN4-202ENST00000337526 IFITM10A6NMD0 228 aa11.75□□□□□ -0.53
RTN4-202ENST00000337526 PTGDSP41222 190 aa11.75□□□□□ -0.53
RTN4-202ENST00000337526 HCP5Q6MZN7 132 aa11.75□□□□□ -0.53
RTN4-202ENST00000337526 ABHD12Q8N2K0 398 aa11.75□□□□□ -0.53
RTN4-202ENST00000337526 DDA1Q9BW61 102 aa11.75□□□□□ -0.53
RTN4-202ENST00000337526 DNASE2O00115 360 aaPredicted RBP11.75□□□□□ -0.53
RTN4-202ENST00000337526 F2RL2O00254 374 aa11.75□□□□□ -0.53
RTN4-202ENST00000337526 KBTBD11O94819 623 aa11.75□□□□□ -0.53
RTN4-202ENST00000337526 HLA-DQA1P01909 254 aa11.75□□□□□ -0.53
RTN4-202ENST00000337526 RPL7P18124 248 aaKnown RBP11.75□□□□□ -0.53
RTN4-202ENST00000337526 EFNB1P98172 346 aa11.75□□□□□ -0.53
RTN4-202ENST00000337526 BPIFA4PQ86YQ2 179 aa11.75□□□□□ -0.53
RTN4-202ENST00000337526 AKIRIN1Q9H9L7 192 aaPredicted RBP11.75□□□□□ -0.53
RTN4-202ENST00000337526 PSMG3Q9BT73 122 aaPredicted RBP11.75□□□□□ -0.53
RTN4-202ENST00000337526 QTRT1Q9BXR0 403 aaKnown RBP11.75□□□□□ -0.53
RTN4-202ENST00000337526 TCF19Q9Y242 345 aa11.75□□□□□ -0.53
RTN4-202ENST00000337526 KCNMB2Q9Y691 235 aa11.75□□□□□ -0.53
RTN4-202ENST00000337526 PGPA6NDG6 321 aa11.75□□□□□ -0.53
RTN4-202ENST00000337526 TMEM250H0YL14 139 aa11.75□□□□□ -0.53
RTN4-202ENST00000337526 IGFBP3P17936 291 aaPredicted RBP11.75□□□□□ -0.53
RTN4-202ENST00000337526 SLC35E4Q6ICL7 350 aa11.75□□□□□ -0.53
RTN4-202ENST00000337526 SCGB1D4Q6XE38 83 aa11.75□□□□□ -0.53
RTN4-202ENST00000337526 GBGT1Q8N5D6 347 aa11.75□□□□□ -0.53
RTN4-202ENST00000337526 RCC1LQ96I51 464 aaKnown RBP11.75□□□□□ -0.53
RTN4-202ENST00000337526 CACNA1HO95180 2353 aa11.75□□□□□ -0.53
RTN4-202ENST00000337526 J3KRW8 73 aa11.74□□□□□ -0.53
RTN4-202ENST00000337526 RFPL3SP0C7P2 107 aa11.74□□□□□ -0.53
RTN4-202ENST00000337526 SSTR5P35346 364 aa11.74□□□□□ -0.53
RTN4-202ENST00000337526 GREB1Q4ZG55 1949 aa11.74□□□□□ -0.53
RTN4-202ENST00000337526 PRR32B1ATL7 298 aa11.74□□□□□ -0.53
RTN4-202ENST00000337526 ARL14EPLP0DKL9 152 aa11.74□□□□□ -0.53
RTN4-202ENST00000337526 GAS1P54826 345 aa11.74□□□□□ -0.53
RTN4-202ENST00000337526 CALHM1Q8IU99 346 aa11.74□□□□□ -0.53
RTN4-202ENST00000337526 METTL1Q9UBP6 276 aaKnown RBP11.74□□□□□ -0.53
RTN4-202ENST00000337526 BRCA1P38398 1863 aaKnown RBP11.74□□□□□ -0.53
RTN4-202ENST00000337526 hCG_38984A0A1B0GV85 526 aa11.74□□□□□ -0.53
RTN4-202ENST00000337526 J3QRE1 110 aa11.74□□□□□ -0.53
RTN4-202ENST00000337526 RHBDL1O75783 438 aa11.74□□□□□ -0.53
RTN4-202ENST00000337526 RND2P52198 227 aa11.74□□□□□ -0.53
RTN4-202ENST00000337526 EIF4E3Q8N5X7 224 aaKnown RBP11.74□□□□□ -0.53
RTN4-202ENST00000337526 SCNM1Q9BWG6 230 aa11.74□□□□□ -0.53
RTN4-202ENST00000337526 MRPL18Q9H0U6 180 aaKnown RBP11.74□□□□□ -0.53
RTN4-202ENST00000337526 CREBBPQ92793 2442 aa11.74□□□□□ -0.53
RTN4-202ENST00000337526 ZNF236Q9UL36 1845 aa11.74□□□□□ -0.53
RTN4-202ENST00000337526 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.74□□□□□ -0.53
RTN4-202ENST00000337526 CDX4O14627 284 aaPredicted RBP11.74□□□□□ -0.53
RTN4-202ENST00000337526 EGR1P18146 543 aa11.74□□□□□ -0.53
RTN4-202ENST00000337526 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.74□□□□□ -0.53
RTN4-202ENST00000337526 RBM14Q96PK6 669 aaKnown RBP11.74□□□□□ -0.53
RTN4-202ENST00000337526 FAM117AQ9C073 453 aa11.74□□□□□ -0.53
RTN4-202ENST00000337526 ZNF735P0CB33 412 aa11.73□□□□□ -0.53
RTN4-202ENST00000337526 UCP1P25874 307 aa11.73□□□□□ -0.53
RTN4-202ENST00000337526 ZNF506Q5JVG8 444 aa11.73□□□□□ -0.53
RTN4-202ENST00000337526 LYPD3O95274 346 aa11.73□□□□□ -0.53
RTN4-202ENST00000337526 C8orf88P0DMB2 117 aa11.73□□□□□ -0.53
RTN4-202ENST00000337526 CRYBB3P26998 211 aa11.73□□□□□ -0.53
RTN4-202ENST00000337526 MMD2Q8IY49 270 aa11.73□□□□□ -0.53
RTN4-202ENST00000337526 ZNF441Q8N8Z8 693 aa11.73□□□□□ -0.53
RTN4-202ENST00000337526 LILRB1Q8NHL6 650 aaPredicted RBP11.73□□□□□ -0.53
RTN4-202ENST00000337526 OR5P3Q8WZ94 311 aa11.73□□□□□ -0.53
RTN4-202ENST00000337526 LEAP2Q969E1 77 aa11.73□□□□□ -0.53
RTN4-202ENST00000337526 SPSB4Q96A44 273 aa11.73□□□□□ -0.53
RTN4-202ENST00000337526 DNAJC4Q9NNZ3 241 aa11.73□□□□□ -0.53
RTN4-202ENST00000337526 CHD5Q8TDI0 1954 aa11.73□□□□□ -0.53
RTN4-202ENST00000337526 GPR179Q6PRD1 2367 aa11.73□□□□□ -0.53
RTN4-202ENST00000337526 A6NDN8 102 aa11.73□□□□□ -0.53
RTN4-202ENST00000337526 LRRC75BQ2VPJ9 315 aa11.73□□□□□ -0.53
RTN4-202ENST00000337526 PPP1R32Q7Z5V6 425 aa11.73□□□□□ -0.53
RTN4-202ENST00000337526 CRIPAKQ8N1N5 446 aa11.73□□□□□ -0.53
RTN4-202ENST00000337526 TMEM208Q9BTX3 173 aa11.73□□□□□ -0.53
RTN4-202ENST00000337526 TNFRSF19Q9NS68 423 aa11.73□□□□□ -0.53
RTN4-202ENST00000337526 JPT1Q9UK76 154 aa11.73□□□□□ -0.53
RTN4-202ENST00000337526 DICER1Q9UPY3 1922 aaKnown RBP11.73□□□□□ -0.53
RTN4-202ENST00000337526 PLXNA1Q9UIW2 1896 aa11.73□□□□□ -0.53
RTN4-202ENST00000337526 KIAA1644Q3SXP7 199 aa11.72□□□□□ -0.53
RTN4-202ENST00000337526 CCDC144NLQ6NUI1 221 aa11.72□□□□□ -0.53
RTN4-202ENST00000337526 SSX8Q7RTT4 187 aa11.72□□□□□ -0.53
RTN4-202ENST00000337526 VKORC1L1Q8N0U8 176 aa11.72□□□□□ -0.53
RTN4-202ENST00000337526 DIRC2Q96SL1 478 aa11.72□□□□□ -0.53
RTN4-202ENST00000337526 TRBV23-1A0A0A0MS06 115 aa11.72□□□□□ -0.53
RTN4-202ENST00000337526 PQLC2LA1A4F0 135 aa11.72□□□□□ -0.53
RTN4-202ENST00000337526 HOXA4Q00056 320 aaPredicted RBP11.72□□□□□ -0.53
RTN4-202ENST00000337526 FXYD3Q14802 87 aa11.72□□□□□ -0.53
RTN4-202ENST00000337526 LY6G6FQ5SQ64 297 aa11.72□□□□□ -0.53
RTN4-202ENST00000337526 C1orf185Q5T7R7 199 aa11.72□□□□□ -0.53
RTN4-202ENST00000337526 DGAT2L7PQ6IED9 249 aa11.72□□□□□ -0.53
RTN4-202ENST00000337526 OR5R1Q8NH85 324 aa11.72□□□□□ -0.53
RTN4-202ENST00000337526 TMEM45BQ96B21 275 aa11.72□□□□□ -0.53
RTN4-202ENST00000337526 GGACTQ9BVM4 153 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms