RNA–Protein interactions for RNA: ENST00000336294.9

TMEM39B-201, Transcript of transmembrane protein 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39B, Length 1,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-201ENST00000336294 PROP1O75360 226 aa13.8□□□□□ -0.2
TMEM39B-201ENST00000336294 GYPAP02724 150 aa13.8□□□□□ -0.2
TMEM39B-201ENST00000336294 S100A8P05109 93 aa13.8□□□□□ -0.2
TMEM39B-201ENST00000336294 FAM87AP0C7U9 286 aa13.8□□□□□ -0.2
TMEM39B-201ENST00000336294 KIR2DS2P43631 304 aa13.8□□□□□ -0.2
TMEM39B-201ENST00000336294 ETV3LQ6ZN32 361 aa13.8□□□□□ -0.2
TMEM39B-201ENST00000336294 CCL13Q99616 98 aa13.8□□□□□ -0.2
TMEM39B-201ENST00000336294 RSG1Q9BU20 258 aa13.8□□□□□ -0.2
TMEM39B-201ENST00000336294 FAM90A9PA6NNJ1 464 aa13.8□□□□□ -0.2
TMEM39B-201ENST00000336294 VSTM5A8MXK1 200 aa13.8□□□□□ -0.2
TMEM39B-201ENST00000336294 ZNF134P52741 427 aa13.8□□□□□ -0.2
TMEM39B-201ENST00000336294 CCL20P78556 96 aa13.8□□□□□ -0.2
TMEM39B-201ENST00000336294 CCL8P80075 99 aa13.8□□□□□ -0.2
TMEM39B-201ENST00000336294 ATP6V1FQ16864 119 aa13.8□□□□□ -0.2
TMEM39B-201ENST00000336294 AKIRIN2Q53H80 203 aa13.8□□□□□ -0.2
TMEM39B-201ENST00000336294 DUX4L9Q6RFH8 374 aaPredicted RBP13.8□□□□□ -0.2
TMEM39B-201ENST00000336294 OR4C12Q96R67 309 aa13.8□□□□□ -0.2
TMEM39B-201ENST00000336294 WDR61Q9GZS3 305 aaKnown RBP13.8□□□□□ -0.2
TMEM39B-201ENST00000336294 NGBQ9NPG2 151 aa13.8□□□□□ -0.2
TMEM39B-201ENST00000336294 CADP27708 2225 aa13.8□□□□□ -0.2
TMEM39B-201ENST00000336294 A0A087WWC5 75 aa13.79□□□□□ -0.2
TMEM39B-201ENST00000336294 NKX6-3A6NJ46 265 aa13.79□□□□□ -0.2
TMEM39B-201ENST00000336294 UBE2CO00762 179 aa13.79□□□□□ -0.2
TMEM39B-201ENST00000336294 ZG16O60844 167 aa13.79□□□□□ -0.2
TMEM39B-201ENST00000336294 SRP19P09132 144 aaKnown RBP13.79□□□□□ -0.2
TMEM39B-201ENST00000336294 RAB5AP20339 215 aa13.79□□□□□ -0.2
TMEM39B-201ENST00000336294 MEOX2P50222 304 aa13.79□□□□□ -0.2
TMEM39B-201ENST00000336294 SERF2P84101 59 aa13.79□□□□□ -0.2
TMEM39B-201ENST00000336294 TMEM30BQ3MIR4 351 aa13.79□□□□□ -0.2
TMEM39B-201ENST00000336294 KHDC3LQ587J8 217 aa13.79□□□□□ -0.2
TMEM39B-201ENST00000336294 RPL39P5Q59GN2 51 aa13.79□□□□□ -0.2
TMEM39B-201ENST00000336294 OR8G2PQ6IF36 304 aa13.79□□□□□ -0.2
TMEM39B-201ENST00000336294 C1QL4Q86Z23 238 aa13.79□□□□□ -0.2
TMEM39B-201ENST00000336294 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.79□□□□□ -0.2
TMEM39B-201ENST00000336294 S1PR3Q99500 378 aa13.79□□□□□ -0.2
TMEM39B-201ENST00000336294 C12orf57Q99622 126 aa13.79□□□□□ -0.2
TMEM39B-201ENST00000336294 CEP295Q9C0D2 2601 aa13.79□□□□□ -0.2
TMEM39B-201ENST00000336294 DSPP15924 2871 aaKnown RBP13.78□□□□□ -0.2
TMEM39B-201ENST00000336294 A0A1W2PPH5 198 aa13.78□□□□□ -0.2
TMEM39B-201ENST00000336294 C5orf52A6NGY3 159 aa13.78□□□□□ -0.2
TMEM39B-201ENST00000336294 ZNF729A6NN14 1252 aaPredicted RBP13.78□□□□□ -0.2
TMEM39B-201ENST00000336294 CEBPZOSA8MTT3 80 aa13.78□□□□□ -0.2
TMEM39B-201ENST00000336294 SLC31A2O15432 143 aa13.78□□□□□ -0.2
TMEM39B-201ENST00000336294 SCAF4O95104 1147 aaKnown RBP13.78□□□□□ -0.2
TMEM39B-201ENST00000336294 OR13C7P0DN81 318 aa13.78□□□□□ -0.2
TMEM39B-201ENST00000336294 ERVK-16P61578 105 aa13.78□□□□□ -0.2
TMEM39B-201ENST00000336294 FAM216BQ8N7L0 139 aa13.78□□□□□ -0.2
TMEM39B-201ENST00000336294 C2CD4CQ8TF44 421 aa13.78□□□□□ -0.2
TMEM39B-201ENST00000336294 VKORC1Q9BQB6 163 aa13.78□□□□□ -0.2
TMEM39B-201ENST00000336294 IDI2-AS1Q9NZ38 188 aa13.78□□□□□ -0.2
TMEM39B-201ENST00000336294 UBE2L5PA0A1B0GUS4 154 aa13.78□□□□□ -0.2
TMEM39B-201ENST00000336294 LY86O95711 162 aa13.78□□□□□ -0.2
TMEM39B-201ENST00000336294 IGHV3-7P01780 117 aa13.78□□□□□ -0.2
TMEM39B-201ENST00000336294 S100A6P06703 90 aa13.78□□□□□ -0.2
TMEM39B-201ENST00000336294 UCNP55089 124 aa13.78□□□□□ -0.2
TMEM39B-201ENST00000336294 PRAMEF5Q5TYX0 476 aa13.78□□□□□ -0.2
TMEM39B-201ENST00000336294 ADAM5Q6NVV9 412 aa13.78□□□□□ -0.2
TMEM39B-201ENST00000336294 ZFP82Q8N141 532 aa13.78□□□□□ -0.2
TMEM39B-201ENST00000336294 TAF15Q92804 592 aaKnown RBP eCLIP13.78□□□□□ -0.2
TMEM39B-201ENST00000336294 CORO2AQ92828 525 aa13.78□□□□□ -0.2
TMEM39B-201ENST00000336294 ZDHHC16Q969W1 377 aa13.78□□□□□ -0.2
TMEM39B-201ENST00000336294 PINX1Q96BK5 328 aaKnown RBP13.78□□□□□ -0.2
TMEM39B-201ENST00000336294 RARRES2Q99969 163 aa13.78□□□□□ -0.2
TMEM39B-201ENST00000336294 TCEAL7Q9BRU2 100 aa13.78□□□□□ -0.2
TMEM39B-201ENST00000336294 TMEM147Q9BVK8 224 aa13.78□□□□□ -0.2
TMEM39B-201ENST00000336294 TIMM9Q9Y5J7 89 aa13.78□□□□□ -0.2
TMEM39B-201ENST00000336294 RAI1Q7Z5J4 1906 aaPredicted RBP13.78□□□□□ -0.2
TMEM39B-201ENST00000336294 TRAV38-1A0A0B4J264 116 aa13.77□□□□□ -0.21
TMEM39B-201ENST00000336294 OR9G9P0C7N8 305 aa13.77□□□□□ -0.21
TMEM39B-201ENST00000336294 SMIM6P0DI80 62 aa13.77□□□□□ -0.21
TMEM39B-201ENST00000336294 AKR1C3P42330 323 aa13.77□□□□□ -0.21
TMEM39B-201ENST00000336294 TLE1Q04724 770 aa13.77□□□□□ -0.21
TMEM39B-201ENST00000336294 ICAM4Q14773 271 aa13.77□□□□□ -0.21
TMEM39B-201ENST00000336294 AARDQ4LEZ3 155 aa13.77□□□□□ -0.21
TMEM39B-201ENST00000336294 CT45A1Q5HYN5 189 aa13.77□□□□□ -0.21
TMEM39B-201ENST00000336294 TCF23Q7RTU1 214 aa13.77□□□□□ -0.21
TMEM39B-201ENST00000336294 TGIF2LYQ8IUE0 185 aa13.77□□□□□ -0.21
TMEM39B-201ENST00000336294 OR10P1Q8NGE3 313 aa13.77□□□□□ -0.21
TMEM39B-201ENST00000336294 CLDND2Q8NHS1 167 aa13.77□□□□□ -0.21
TMEM39B-201ENST00000336294 CT45A3Q8NHU0 189 aa13.77□□□□□ -0.21
TMEM39B-201ENST00000336294 WFIKKN1Q96NZ8 548 aa13.77□□□□□ -0.21
TMEM39B-201ENST00000336294 QTRT1Q9BXR0 403 aaKnown RBP13.77□□□□□ -0.21
TMEM39B-201ENST00000336294 LINC00574Q9H8X3 128 aa13.77□□□□□ -0.21
TMEM39B-201ENST00000336294 RPRMQ9NS64 109 aa13.77□□□□□ -0.21
TMEM39B-201ENST00000336294 DCAF16Q9NXF7 216 aa13.77□□□□□ -0.21
TMEM39B-201ENST00000336294 METTL1Q9UBP6 276 aaKnown RBP13.77□□□□□ -0.21
TMEM39B-201ENST00000336294 CACNA1DQ01668 2161 aa13.77□□□□□ -0.21
TMEM39B-201ENST00000336294 NQO2P16083 231 aa13.76□□□□□ -0.21
TMEM39B-201ENST00000336294 TMEM41BQ5BJD5 291 aa13.76□□□□□ -0.21
TMEM39B-201ENST00000336294 C1orf87Q8N0U7 546 aa13.76□□□□□ -0.21
TMEM39B-201ENST00000336294 OR4A16Q8NH70 328 aa13.76□□□□□ -0.21
TMEM39B-201ENST00000336294 OR4S2Q8NH73 311 aa13.76□□□□□ -0.21
TMEM39B-201ENST00000336294 DDB2Q92466 427 aa13.76□□□□□ -0.21
TMEM39B-201ENST00000336294 LEAP2Q969E1 77 aa13.76□□□□□ -0.21
TMEM39B-201ENST00000336294 YPEL4Q96NS1 127 aa13.76□□□□□ -0.21
TMEM39B-201ENST00000336294 SAP30LQ9HAJ7 183 aa13.76□□□□□ -0.21
TMEM39B-201ENST00000336294 SIRT7Q9NRC8 400 aa13.76□□□□□ -0.21
TMEM39B-201ENST00000336294 DSCAMO60469 2012 aa13.76□□□□□ -0.21
TMEM39B-201ENST00000336294 hADV38S2A0JD32 116 aa13.76□□□□□ -0.21
TMEM39B-201ENST00000336294 CXorf65A6NEN9 183 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms