RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 NCBP2LA6PVI3 153 aaKnown RBP5.5□□□□□ -1.53
HMG20A-201ENST00000336216 H0Y8G0 127 aa5.5□□□□□ -1.53
HMG20A-201ENST00000336216 C16orf97H3BN30 126 aa5.5□□□□□ -1.53
HMG20A-201ENST00000336216 PAGE4O60829 102 aa5.5□□□□□ -1.53
HMG20A-201ENST00000336216 CYB5R3P00387 301 aaPredicted RBP5.5□□□□□ -1.53
HMG20A-201ENST00000336216 HSPB1P04792 205 aaKnown RBP5.5□□□□□ -1.53
HMG20A-201ENST00000336216 COX5AP20674 150 aa5.5□□□□□ -1.53
HMG20A-201ENST00000336216 WNT5AP41221 380 aa5.5□□□□□ -1.53
HMG20A-201ENST00000336216 RPL11P62913 178 aaKnown RBP5.5□□□□□ -1.53
HMG20A-201ENST00000336216 HIST1H3AP68431 136 aa5.5□□□□□ -1.53
HMG20A-201ENST00000336216 ZNF90Q03938 601 aa5.5□□□□□ -1.53
HMG20A-201ENST00000336216 FOXF2Q12947 444 aa5.5□□□□□ -1.53
HMG20A-201ENST00000336216 DPPA3Q6W0C5 159 aa5.5□□□□□ -1.53
HMG20A-201ENST00000336216 OR4X1Q8NH49 305 aa5.5□□□□□ -1.53
HMG20A-201ENST00000336216 GTF3AQ92664 365 aaKnown RBP5.5□□□□□ -1.53
HMG20A-201ENST00000336216 LIME1Q9H400 295 aa5.5□□□□□ -1.53
HMG20A-201ENST00000336216 GLRX2Q9NS18 164 aa5.5□□□□□ -1.53
HMG20A-201ENST00000336216 ONECUT1Q9UBC0 465 aa5.5□□□□□ -1.53
HMG20A-201ENST00000336216 TUBD1Q9UJT1 453 aa5.5□□□□□ -1.53
HMG20A-201ENST00000336216 LOC102723996A0A087X1L8 192 aa5.5□□□□□ -1.53
HMG20A-201ENST00000336216 IGKV1-12A0A0C4DH73 117 aa5.5□□□□□ -1.53
HMG20A-201ENST00000336216 ZNF716A6NP11 495 aa5.5□□□□□ -1.53
HMG20A-201ENST00000336216 LILRA1O75019 489 aa5.5□□□□□ -1.53
HMG20A-201ENST00000336216 CDS2O95674 445 aa5.5□□□□□ -1.53
HMG20A-201ENST00000336216 IGKV1D-12P01611 117 aa5.5□□□□□ -1.53
HMG20A-201ENST00000336216 IGHMP01871 453 aa5.5□□□□□ -1.53
HMG20A-201ENST00000336216 CD55P08174 381 aa5.5□□□□□ -1.53
HMG20A-201ENST00000336216 GNB2P62879 340 aa5.5□□□□□ -1.53
HMG20A-201ENST00000336216 PSG7Q13046 419 aa5.5□□□□□ -1.53
HMG20A-201ENST00000336216 INO80CQ6PI98 192 aaPredicted RBP5.5□□□□□ -1.53
HMG20A-201ENST00000336216 MRPL30Q8TCC3 161 aaKnown RBP5.5□□□□□ -1.53
HMG20A-201ENST00000336216 VN1R17PQ8TDU5 208 aa5.5□□□□□ -1.53
HMG20A-201ENST00000336216 TMEM54Q969K7 222 aa5.5□□□□□ -1.53
HMG20A-201ENST00000336216 C10orf35Q96D05 121 aa5.5□□□□□ -1.53
HMG20A-201ENST00000336216 UHRF2Q96PU4 802 aa5.5□□□□□ -1.53
HMG20A-201ENST00000336216 NAV2Q8IVL1 2488 aa5.5□□□□□ -1.53
HMG20A-201ENST00000336216 hCG_38984A0A1B0GV85 526 aa5.5□□□□□ -1.53
HMG20A-201ENST00000336216 A8MXE2 369 aa5.5□□□□□ -1.53
HMG20A-201ENST00000336216 IFNL4K9M1U5 179 aa5.5□□□□□ -1.53
HMG20A-201ENST00000336216 CCL21O00585 134 aa5.5□□□□□ -1.53
HMG20A-201ENST00000336216 PITX3O75364 302 aa5.5□□□□□ -1.53
HMG20A-201ENST00000336216 SELLP14151 372 aa5.5□□□□□ -1.53
HMG20A-201ENST00000336216 MDH2P40926 338 aaKnown RBP5.5□□□□□ -1.53
HMG20A-201ENST00000336216 LHX2P50458 406 aa5.5□□□□□ -1.53
HMG20A-201ENST00000336216 RTL8BQ17RB0 113 aa5.5□□□□□ -1.53
HMG20A-201ENST00000336216 SLC35E3Q7Z769 313 aa5.5□□□□□ -1.53
HMG20A-201ENST00000336216 R3HDM4Q96D70 268 aa5.5□□□□□ -1.53
HMG20A-201ENST00000336216 ABHD17AQ96GS6 310 aa5.5□□□□□ -1.53
HMG20A-201ENST00000336216 TMEM222Q9H0R3 208 aa5.5□□□□□ -1.53
HMG20A-201ENST00000336216 TCF21O43680 179 aa5.49□□□□□ -1.53
HMG20A-201ENST00000336216 PMCHP20382 165 aa5.49□□□□□ -1.53
HMG20A-201ENST00000336216 MPV17P39210 176 aa5.49□□□□□ -1.53
HMG20A-201ENST00000336216 PCP4P48539 62 aa5.49□□□□□ -1.53
HMG20A-201ENST00000336216 THBS3P49746 956 aa5.49□□□□□ -1.53
HMG20A-201ENST00000336216 CLDN18P56856 261 aa5.49□□□□□ -1.53
HMG20A-201ENST00000336216 RPL31P62899 125 aaKnown RBP5.49□□□□□ -1.53
HMG20A-201ENST00000336216 SLC35B1P78383 322 aa5.49□□□□□ -1.53
HMG20A-201ENST00000336216 IL24Q13007 206 aa5.49□□□□□ -1.53
HMG20A-201ENST00000336216 LRRC10Q5BKY1 277 aa5.49□□□□□ -1.53
HMG20A-201ENST00000336216 ETFRF1Q6IPR1 90 aa5.49□□□□□ -1.53
HMG20A-201ENST00000336216 DTD1Q8TEA8 209 aa5.49□□□□□ -1.53
HMG20A-201ENST00000336216 ACTR3CQ9C0K3 210 aaPredicted RBP5.49□□□□□ -1.53
HMG20A-201ENST00000336216 VAX2Q9UIW0 290 aa5.49□□□□□ -1.53
HMG20A-201ENST00000336216 EREGO14944 169 aa5.49□□□□□ -1.53
HMG20A-201ENST00000336216 PGLYRP1O75594 196 aaPredicted RBP5.49□□□□□ -1.53
HMG20A-201ENST00000336216 AMBPP02760 352 aa5.49□□□□□ -1.53
HMG20A-201ENST00000336216 CECR9P0C854 216 aa5.49□□□□□ -1.53
HMG20A-201ENST00000336216 MPZP25189 248 aa5.49□□□□□ -1.53
HMG20A-201ENST00000336216 OPRK1P41145 380 aa5.49□□□□□ -1.53
HMG20A-201ENST00000336216 PNRC1Q12796 327 aaPredicted RBP5.49□□□□□ -1.53
HMG20A-201ENST00000336216 GGNQ86UU5 652 aa5.49□□□□□ -1.53
HMG20A-201ENST00000336216 ZNF664Q8N3J9 261 aa5.49□□□□□ -1.53
HMG20A-201ENST00000336216 FGFRL1Q8N441 504 aa5.49□□□□□ -1.53
HMG20A-201ENST00000336216 C9orf106Q8NAJ2 232 aa5.49□□□□□ -1.53
HMG20A-201ENST00000336216 CLDND2Q8NHS1 167 aa5.49□□□□□ -1.53
HMG20A-201ENST00000336216 PRDM13Q9H4Q3 707 aa5.49□□□□□ -1.53
HMG20A-201ENST00000336216 GNB4Q9HAV0 340 aa5.49□□□□□ -1.53
HMG20A-201ENST00000336216 TNFRSF19Q9NS68 423 aa5.49□□□□□ -1.53
HMG20A-201ENST00000336216 LYRM2Q9NU23 88 aaPredicted RBP5.49□□□□□ -1.53
HMG20A-201ENST00000336216 NAT8Q9UHE5 227 aa5.49□□□□□ -1.53
HMG20A-201ENST00000336216 GOLT1BQ9Y3E0 138 aa5.49□□□□□ -1.53
HMG20A-201ENST00000336216 WDFY3Q8IZQ1 3526 aa5.49□□□□□ -1.53
HMG20A-201ENST00000336216 LY6G6EA0A0G2JKS1 128 aa5.49□□□□□ -1.53
HMG20A-201ENST00000336216 A0A1B0GUS0 222 aa5.49□□□□□ -1.53
HMG20A-201ENST00000336216 NPIPB13A6NJU9 1138 aa5.49□□□□□ -1.53
HMG20A-201ENST00000336216 NPIPB4C9JG80 1138 aa5.49□□□□□ -1.53
HMG20A-201ENST00000336216 CDX4O14627 284 aaPredicted RBP5.49□□□□□ -1.53
HMG20A-201ENST00000336216 SRSF10O75494 262 aaKnown RBP5.49□□□□□ -1.53
HMG20A-201ENST00000336216 ERHP84090 104 aaKnown RBP5.49□□□□□ -1.53
HMG20A-201ENST00000336216 SELENOHQ8IZQ5 122 aaKnown RBP5.49□□□□□ -1.53
HMG20A-201ENST00000336216 OR10G4Q8NGN3 311 aa5.49□□□□□ -1.53
HMG20A-201ENST00000336216 OR10G9Q8NGN4 311 aa5.49□□□□□ -1.53
HMG20A-201ENST00000336216 OR10G7Q8NGN6 311 aa5.49□□□□□ -1.53
HMG20A-201ENST00000336216 MOB3AQ96BX8 217 aa5.49□□□□□ -1.53
HMG20A-201ENST00000336216 DAZAP1Q96EP5 407 aaKnown RBP5.49□□□□□ -1.53
HMG20A-201ENST00000336216 TIMD4Q96H15 378 aa5.49□□□□□ -1.53
HMG20A-201ENST00000336216 C1orf147Q96MC9 270 aaPredicted RBP5.49□□□□□ -1.53
HMG20A-201ENST00000336216 OR4C12Q96R67 309 aa5.49□□□□□ -1.53
HMG20A-201ENST00000336216 RAB40CQ96S21 281 aa5.49□□□□□ -1.53
HMG20A-201ENST00000336216 WIPI2Q9Y4P8 454 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 561.2 ms