RNA–Protein interactions for RNA: ENST00000336023.9

TUBA1B-202, Transcript of tubulin alpha 1b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA1B, Length 1,627 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-202ENST00000336023 SUPT4H1P63272 117 aaKnown RBP11□□□□□ -0.65
TUBA1B-202ENST00000336023 DHODHQ02127 395 aa11□□□□□ -0.65
TUBA1B-202ENST00000336023 HES1Q14469 280 aa11□□□□□ -0.65
TUBA1B-202ENST00000336023 HNF4GQ14541 408 aa11□□□□□ -0.65
TUBA1B-202ENST00000336023 SP6Q3SY56 376 aa11□□□□□ -0.65
TUBA1B-202ENST00000336023 FBLN7Q53RD9 439 aa11□□□□□ -0.65
TUBA1B-202ENST00000336023 PDPNQ86YL7 162 aa11□□□□□ -0.65
TUBA1B-202ENST00000336023 TCTEX1D1Q8N7M0 179 aa11□□□□□ -0.65
TUBA1B-202ENST00000336023 CD300LFQ8TDQ1 290 aa11□□□□□ -0.65
TUBA1B-202ENST00000336023 SSMEM1Q8WWF3 244 aa11□□□□□ -0.65
TUBA1B-202ENST00000336023 TP53RKQ96S44 253 aa11□□□□□ -0.65
TUBA1B-202ENST00000336023 MARVELD1Q9BSK0 173 aa11□□□□□ -0.65
TUBA1B-202ENST00000336023 ALX4Q9H161 411 aaPredicted RBP11□□□□□ -0.65
TUBA1B-202ENST00000336023 KCNIP3Q9Y2W7 256 aa11□□□□□ -0.65
TUBA1B-202ENST00000336023 INMT-MINDY4F8WBC2 141 aa10.99□□□□□ -0.65
TUBA1B-202ENST00000336023 RBFOX2O43251 390 aaKnown RBP eCLIP10.99□□□□□ -0.65
TUBA1B-202ENST00000336023 CRYZL1O95825 349 aa10.99□□□□□ -0.65
TUBA1B-202ENST00000336023 MOSP00540 346 aa10.99□□□□□ -0.65
TUBA1B-202ENST00000336023 OR5AC1P0C628 307 aa10.99□□□□□ -0.65
TUBA1B-202ENST00000336023 OR4E1P0C645 316 aa10.99□□□□□ -0.65
TUBA1B-202ENST00000336023 VAMP1P23763 118 aa10.99□□□□□ -0.65
TUBA1B-202ENST00000336023 MECP2P51608 486 aaKnown RBP10.99□□□□□ -0.65
TUBA1B-202ENST00000336023 CBX3Q13185 183 aa10.99□□□□□ -0.65
TUBA1B-202ENST00000336023 PPP1R1AQ13522 171 aa10.99□□□□□ -0.65
TUBA1B-202ENST00000336023 EBI3Q14213 229 aa10.99□□□□□ -0.65
TUBA1B-202ENST00000336023 OXA1LQ15070 435 aa10.99□□□□□ -0.65
TUBA1B-202ENST00000336023 ZNF585BQ52M93 769 aa10.99□□□□□ -0.65
TUBA1B-202ENST00000336023 C11orf88Q6PI97 169 aa10.99□□□□□ -0.65
TUBA1B-202ENST00000336023 OR4C13Q8NGP0 309 aa10.99□□□□□ -0.65
TUBA1B-202ENST00000336023 OR2T10Q8NGZ9 312 aa10.99□□□□□ -0.65
TUBA1B-202ENST00000336023 OR4S2Q8NH73 311 aa10.99□□□□□ -0.65
TUBA1B-202ENST00000336023 FLYWCH2Q96CP2 140 aaKnown RBP10.99□□□□□ -0.65
TUBA1B-202ENST00000336023 GALNT14Q96FL9 552 aa10.99□□□□□ -0.65
TUBA1B-202ENST00000336023 EAF1Q96JC9 268 aaPredicted RBP10.99□□□□□ -0.65
TUBA1B-202ENST00000336023 RITA1Q96K30 269 aa10.99□□□□□ -0.65
TUBA1B-202ENST00000336023 JMJD1CQ15652 2540 aa10.99□□□□□ -0.65
TUBA1B-202ENST00000336023 HOXA3O43365 443 aaPredicted RBP10.98□□□□□ -0.65
TUBA1B-202ENST00000336023 B3GALNT1O75752 331 aa10.98□□□□□ -0.65
TUBA1B-202ENST00000336023 SERPINE2P07093 398 aa10.98□□□□□ -0.65
TUBA1B-202ENST00000336023 RAG2P55895 527 aa10.98□□□□□ -0.65
TUBA1B-202ENST00000336023 LY6EQ16553 131 aa10.98□□□□□ -0.65
TUBA1B-202ENST00000336023 TRIM16LQ309B1 348 aa10.98□□□□□ -0.65
TUBA1B-202ENST00000336023 C4orf46Q504U0 113 aa10.98□□□□□ -0.65
TUBA1B-202ENST00000336023 DHRS7BQ6IAN0 325 aaPredicted RBP10.98□□□□□ -0.65
TUBA1B-202ENST00000336023 OR5R1Q8NH85 324 aa10.98□□□□□ -0.65
TUBA1B-202ENST00000336023 GLYATL2Q8WU03 294 aa10.98□□□□□ -0.65
TUBA1B-202ENST00000336023 FAM212BQ9NTI7 297 aaPredicted RBP10.98□□□□□ -0.65
TUBA1B-202ENST00000336023 TCF19Q9Y242 345 aa10.98□□□□□ -0.65
TUBA1B-202ENST00000336023 C9orf170A2RU37 121 aa10.98□□□□□ -0.65
TUBA1B-202ENST00000336023 BTBD17A6NE02 478 aa10.98□□□□□ -0.65
TUBA1B-202ENST00000336023 SHOXO15266 292 aa10.98□□□□□ -0.65
TUBA1B-202ENST00000336023 IFNA2P01563 188 aa10.98□□□□□ -0.65
TUBA1B-202ENST00000336023 ANXA3P12429 323 aa10.98□□□□□ -0.65
TUBA1B-202ENST00000336023 TMEM11P17152 192 aa10.98□□□□□ -0.65
TUBA1B-202ENST00000336023 UCP1P25874 307 aa10.98□□□□□ -0.65
TUBA1B-202ENST00000336023 LPAR6P43657 344 aa10.98□□□□□ -0.65
TUBA1B-202ENST00000336023 RPS16P62249 146 aaKnown RBP10.98□□□□□ -0.65
TUBA1B-202ENST00000336023 DHRS2Q13268 280 aa10.98□□□□□ -0.65
TUBA1B-202ENST00000336023 SLC9A3R2Q15599 337 aa10.98□□□□□ -0.65
TUBA1B-202ENST00000336023 TMEM177Q53S58 311 aa10.98□□□□□ -0.65
TUBA1B-202ENST00000336023 ZNF418Q8TF45 676 aaPredicted RBP10.98□□□□□ -0.65
TUBA1B-202ENST00000336023 CHPT1Q8WUD6 406 aa10.98□□□□□ -0.65
TUBA1B-202ENST00000336023 TMEM222Q9H0R3 208 aa10.98□□□□□ -0.65
TUBA1B-202ENST00000336023 TNFRSF19Q9NS68 423 aa10.98□□□□□ -0.65
TUBA1B-202ENST00000336023 SETD2Q9BYW2 2564 aaPredicted RBP10.97□□□□□ -0.65
TUBA1B-202ENST00000336023 A6NDX4 124 aa10.97□□□□□ -0.65
TUBA1B-202ENST00000336023 SRRM4A7MD48 611 aaKnown RBP10.97□□□□□ -0.65
TUBA1B-202ENST00000336023 S1PR2O95136 353 aa10.97□□□□□ -0.65
TUBA1B-202ENST00000336023 SFT2D2O95562 160 aa10.97□□□□□ -0.65
TUBA1B-202ENST00000336023 HPRT1P00492 218 aa10.97□□□□□ -0.65
TUBA1B-202ENST00000336023 HLA-AP01891 365 aaKnown RBP10.97□□□□□ -0.65
TUBA1B-202ENST00000336023 TMEM187Q14656 261 aa10.97□□□□□ -0.65
TUBA1B-202ENST00000336023 LYG2Q86SG7 212 aa10.97□□□□□ -0.65
TUBA1B-202ENST00000336023 TMEM219Q86XT9 240 aa10.97□□□□□ -0.65
TUBA1B-202ENST00000336023 Q8N6K4 173 aa10.97□□□□□ -0.65
TUBA1B-202ENST00000336023 OSR1Q8TAX0 266 aaPredicted RBP10.97□□□□□ -0.65
TUBA1B-202ENST00000336023 CASTOR1Q8WTX7 329 aa10.97□□□□□ -0.65
TUBA1B-202ENST00000336023 HARBI1Q96MB7 349 aa10.97□□□□□ -0.65
TUBA1B-202ENST00000336023 RNF5Q99942 180 aa10.97□□□□□ -0.65
TUBA1B-202ENST00000336023 PLEKHA2Q9HB19 425 aa10.97□□□□□ -0.65
TUBA1B-202ENST00000336023 PRR13Q9NZ81 148 aa10.97□□□□□ -0.65
TUBA1B-202ENST00000336023 PITPNC1Q9UKF7 332 aa10.97□□□□□ -0.65
TUBA1B-202ENST00000336023 CDS2O95674 445 aa10.96□□□□□ -0.65
TUBA1B-202ENST00000336023 DHFRP00374 187 aa10.96□□□□□ -0.65
TUBA1B-202ENST00000336023 IL5P05113 134 aa10.96□□□□□ -0.65
TUBA1B-202ENST00000336023 CNTFRP26992 372 aa10.96□□□□□ -0.65
TUBA1B-202ENST00000336023 LGALS7P47929 136 aa10.96□□□□□ -0.65
TUBA1B-202ENST00000336023 F2RL1P55085 397 aa10.96□□□□□ -0.65
TUBA1B-202ENST00000336023 TMEM86BQ8N661 226 aa10.96□□□□□ -0.65
TUBA1B-202ENST00000336023 MINDY2Q8NBR6 621 aa10.96□□□□□ -0.65
TUBA1B-202ENST00000336023 OR52B4Q8NGK2 314 aa10.96□□□□□ -0.65
TUBA1B-202ENST00000336023 DUX5Q96PT3 197 aa10.96□□□□□ -0.65
TUBA1B-202ENST00000336023 SEC22CQ9BRL7 303 aa10.96□□□□□ -0.65
TUBA1B-202ENST00000336023 VPREB3Q9UKI3 123 aa10.96□□□□□ -0.65
TUBA1B-202ENST00000336023 POMT1Q9Y6A1 747 aa10.96□□□□□ -0.65
TUBA1B-202ENST00000336023 NF1P21359 2839 aa10.96□□□□□ -0.65
TUBA1B-202ENST00000336023 DUS4LO95620 317 aaKnown RBP10.95□□□□□ -0.66
TUBA1B-202ENST00000336023 HRASP01112 189 aa10.95□□□□□ -0.66
TUBA1B-202ENST00000336023 IGKV1-39P01597 117 aa10.95□□□□□ -0.66
TUBA1B-202ENST00000336023 IGKV1D-39P04432 117 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms