RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 SEC11BP0C7V7 166 aa9.47□□□□□ -0.89
POLR1B-202ENST00000333990 WNT5AP41221 380 aa9.47□□□□□ -0.89
POLR1B-202ENST00000333990 GALR1P47211 349 aa9.47□□□□□ -0.89
POLR1B-202ENST00000333990 BLNKQ8WV28 456 aa9.47□□□□□ -0.89
POLR1B-202ENST00000333990 DOCK7Q96N67 2140 aa9.47□□□□□ -0.89
POLR1B-202ENST00000333990 MYLKQ15746 1914 aa9.47□□□□□ -0.89
POLR1B-202ENST00000333990 CEACAM18A8MTB9 384 aa9.47□□□□□ -0.89
POLR1B-202ENST00000333990 RNASEK-C17orf49H0YIS7 233 aa9.47□□□□□ -0.89
POLR1B-202ENST00000333990 VSIG10L2P0DP72 767 aa9.47□□□□□ -0.89
POLR1B-202ENST00000333990 AARDQ4LEZ3 155 aa9.47□□□□□ -0.89
POLR1B-202ENST00000333990 TMEM252Q8N6L7 170 aa9.47□□□□□ -0.89
POLR1B-202ENST00000333990 LEAP2Q969E1 77 aa9.47□□□□□ -0.89
POLR1B-202ENST00000333990 CABLES2Q9BTV7 478 aa9.47□□□□□ -0.89
POLR1B-202ENST00000333990 TLNRD1Q9H1K6 362 aa9.47□□□□□ -0.89
POLR1B-202ENST00000333990 MPDZO75970 2070 aa9.47□□□□□ -0.89
POLR1B-202ENST00000333990 SRRM5B3KS81 715 aa9.47□□□□□ -0.89
POLR1B-202ENST00000333990 SMAD7O15105 426 aaKnown RBP9.47□□□□□ -0.89
POLR1B-202ENST00000333990 HYPMO75409 117 aa9.47□□□□□ -0.89
POLR1B-202ENST00000333990 PLAC9Q5JTB6 97 aa9.47□□□□□ -0.89
POLR1B-202ENST00000333990 OR11H7Q8NGC8 314 aa9.47□□□□□ -0.89
POLR1B-202ENST00000333990 OR13A1Q8NGR1 328 aa9.47□□□□□ -0.89
POLR1B-202ENST00000333990 SPSB4Q96A44 273 aa9.47□□□□□ -0.89
POLR1B-202ENST00000333990 LYZL4Q96KX0 146 aa9.47□□□□□ -0.89
POLR1B-202ENST00000333990 AP1S3Q96PC3 154 aa9.47□□□□□ -0.89
POLR1B-202ENST00000333990 SNRNP200O75643 2136 aaKnown RBP9.47□□□□□ -0.89
POLR1B-202ENST00000333990 OTOGLQ3ZCN5 2332 aa9.47□□□□□ -0.89
POLR1B-202ENST00000333990 IGKV1-9A0A0C4DH69 117 aa9.47□□□□□ -0.89
POLR1B-202ENST00000333990 ZNF705FA8MVS1 300 aaPredicted RBP9.47□□□□□ -0.89
POLR1B-202ENST00000333990 ZNF705DP0CH99 300 aaPredicted RBP9.47□□□□□ -0.89
POLR1B-202ENST00000333990 ZNF705BP0CI00 300 aaPredicted RBP9.47□□□□□ -0.89
POLR1B-202ENST00000333990 CTRB1P17538 263 aa9.47□□□□□ -0.89
POLR1B-202ENST00000333990 MFAP4P55083 255 aa9.47□□□□□ -0.89
POLR1B-202ENST00000333990 ERVFC1-1P60608 527 aa9.47□□□□□ -0.89
POLR1B-202ENST00000333990 CTRB2Q6GPI1 263 aa9.47□□□□□ -0.89
POLR1B-202ENST00000333990 FOXL2NBQ6ZUU3 175 aa9.47□□□□□ -0.89
POLR1B-202ENST00000333990 SSC4DQ8WTU2 575 aa9.47□□□□□ -0.89
POLR1B-202ENST00000333990 TOLLIPQ9H0E2 274 aa9.47□□□□□ -0.89
POLR1B-202ENST00000333990 ZNF319Q9P2F9 582 aa9.47□□□□□ -0.89
POLR1B-202ENST00000333990 APELAP0DMC3 54 aa9.46□□□□□ -0.89
POLR1B-202ENST00000333990 ID1P41134 155 aa9.46□□□□□ -0.89
POLR1B-202ENST00000333990 ZNF672Q499Z4 452 aaPredicted RBP9.46□□□□□ -0.89
POLR1B-202ENST00000333990 STPG3Q8N7X2 389 aa9.46□□□□□ -0.89
POLR1B-202ENST00000333990 GPR146Q96CH1 333 aa9.46□□□□□ -0.89
POLR1B-202ENST00000333990 JMJD8Q96S16 334 aa9.46□□□□□ -0.89
POLR1B-202ENST00000333990 URGCP-MRPS24S4R325 110 aa9.46□□□□□ -0.89
POLR1B-202ENST00000333990 CTXND1A0A1B0GTU2 59 aa9.46□□□□□ -0.9
POLR1B-202ENST00000333990 NPIPB11E5RHQ5 1161 aa9.46□□□□□ -0.9
POLR1B-202ENST00000333990 PROB1E7EW31 1015 aa9.46□□□□□ -0.9
POLR1B-202ENST00000333990 KCNAB3O43448 404 aa9.46□□□□□ -0.9
POLR1B-202ENST00000333990 PITX3O75364 302 aa9.46□□□□□ -0.9
POLR1B-202ENST00000333990 NKX6-2Q9C056 277 aaPredicted RBP9.46□□□□□ -0.9
POLR1B-202ENST00000333990 C5orf66Q9H5L9 145 aa9.46□□□□□ -0.9
POLR1B-202ENST00000333990 TCF19Q9Y242 345 aa9.46□□□□□ -0.9
POLR1B-202ENST00000333990 KIF26AQ9ULI4 1882 aaPredicted RBP9.46□□□□□ -0.9
POLR1B-202ENST00000333990 GNG4P50150 75 aa9.46□□□□□ -0.9
POLR1B-202ENST00000333990 ZNF474Q6S9Z5 364 aaPredicted RBP9.46□□□□□ -0.9
POLR1B-202ENST00000333990 ZNF818PQ6ZRF7 136 aa9.46□□□□□ -0.9
POLR1B-202ENST00000333990 OR4P4Q8NGL7 312 aa9.46□□□□□ -0.9
POLR1B-202ENST00000333990 SIGLEC5O15389 551 aa9.45□□□□□ -0.9
POLR1B-202ENST00000333990 HIST1H1BP16401 226 aaKnown RBP9.45□□□□□ -0.9
POLR1B-202ENST00000333990 SSTP61278 116 aa9.45□□□□□ -0.9
POLR1B-202ENST00000333990 RND3P61587 244 aa9.45□□□□□ -0.9
POLR1B-202ENST00000333990 ZNF146Q15072 292 aa9.45□□□□□ -0.9
POLR1B-202ENST00000333990 PSG5Q15238 335 aa9.45□□□□□ -0.9
POLR1B-202ENST00000333990 LY6EQ16553 131 aa9.45□□□□□ -0.9
POLR1B-202ENST00000333990 FAM106AQ4KMX7 169 aa9.45□□□□□ -0.9
POLR1B-202ENST00000333990 SELENOHQ8IZQ5 122 aaKnown RBP9.45□□□□□ -0.9
POLR1B-202ENST00000333990 FAM216AQ8WUB2 273 aa9.45□□□□□ -0.9
POLR1B-202ENST00000333990 SLC35B3Q9H1N7 401 aa9.45□□□□□ -0.9
POLR1B-202ENST00000333990 HIGD1AQ9Y241 93 aa9.45□□□□□ -0.9
POLR1B-202ENST00000333990 PRR32B1ATL7 298 aa9.45□□□□□ -0.9
POLR1B-202ENST00000333990 YPEL1O60688 119 aa9.45□□□□□ -0.9
POLR1B-202ENST00000333990 IFITM3Q01628 133 aa9.45□□□□□ -0.9
POLR1B-202ENST00000333990 YPEL2Q96QA6 119 aa9.45□□□□□ -0.9
POLR1B-202ENST00000333990 RSRP1Q9BUV0 290 aa9.45□□□□□ -0.9
POLR1B-202ENST00000333990 ELF5Q9UKW6 265 aaPredicted RBP9.45□□□□□ -0.9
POLR1B-202ENST00000333990 TNFSF18Q9UNG2 199 aa9.45□□□□□ -0.9
POLR1B-202ENST00000333990 S1PR2O95136 353 aa9.45□□□□□ -0.9
POLR1B-202ENST00000333990 HIST1H1EP10412 219 aaKnown RBP9.45□□□□□ -0.9
POLR1B-202ENST00000333990 HIST1H3AP68431 136 aa9.45□□□□□ -0.9
POLR1B-202ENST00000333990 TNFRSF9Q07011 255 aa9.45□□□□□ -0.9
POLR1B-202ENST00000333990 FXYD3Q14802 87 aa9.45□□□□□ -0.9
POLR1B-202ENST00000333990 TMEM241Q24JQ0 296 aa9.45□□□□□ -0.9
POLR1B-202ENST00000333990 KHDC3LQ587J8 217 aa9.45□□□□□ -0.9
POLR1B-202ENST00000333990 SLC35E3Q7Z769 313 aa9.45□□□□□ -0.9
POLR1B-202ENST00000333990 H1FOOQ8IZA3 346 aaPredicted RBP9.45□□□□□ -0.9
POLR1B-202ENST00000333990 FAM89BQ8N5H3 189 aa9.45□□□□□ -0.9
POLR1B-202ENST00000333990 RABAC1Q9UI14 185 aa9.45□□□□□ -0.9
POLR1B-202ENST00000333990 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.45□□□□□ -0.95e-7■■■■■ 55.7
POLR1B-202ENST00000333990 WNK2Q9Y3S1 2297 aa9.45□□□□□ -0.9
POLR1B-202ENST00000333990 OTX1P32242 354 aaPredicted RBP9.45□□□□□ -0.9
POLR1B-202ENST00000333990 HCP5Q6MZN7 132 aa9.45□□□□□ -0.9
POLR1B-202ENST00000333990 ZNF429Q86V71 674 aa9.45□□□□□ -0.9
POLR1B-202ENST00000333990 TNFRSF14Q92956 283 aa9.45□□□□□ -0.9
POLR1B-202ENST00000333990 GALNT14Q96FL9 552 aa9.45□□□□□ -0.9
POLR1B-202ENST00000333990 RBM14Q96PK6 669 aaKnown RBP9.45□□□□□ -0.9
POLR1B-202ENST00000333990 BMPR1BO00238 502 aa9.44□□□□□ -0.9
POLR1B-202ENST00000333990 CXorf1O96002 111 aa9.44□□□□□ -0.9
POLR1B-202ENST00000333990 IGKV3-15P01624 115 aa9.44□□□□□ -0.9
POLR1B-202ENST00000333990 ACAA1P09110 424 aaPredicted RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms