RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 DMXL1Q9Y485 3027 aa10.29□□□□□ -0.76
VPS33B-201ENST00000333371 TRAV38-1A0A0B4J264 116 aa10.29□□□□□ -0.76
VPS33B-201ENST00000333371 CTXND1A0A1B0GTU2 59 aa10.29□□□□□ -0.76
VPS33B-201ENST00000333371 TMEM30CPA0ZSE6 113 aa10.29□□□□□ -0.76
VPS33B-201ENST00000333371 PGPEP1LA6NFU8 196 aa10.29□□□□□ -0.76
VPS33B-201ENST00000333371 H7BYZ3 331 aa10.29□□□□□ -0.76
VPS33B-201ENST00000333371 UBE2NP61088 152 aaKnown RBP10.29□□□□□ -0.76
VPS33B-201ENST00000333371 SRSF6Q13247 344 aaKnown RBP10.29□□□□□ -0.76
VPS33B-201ENST00000333371 EIF4EBP1Q13541 118 aaPredicted RBP10.29□□□□□ -0.76
VPS33B-201ENST00000333371 Q8IYB0 196 aa10.29□□□□□ -0.76
VPS33B-201ENST00000333371 OR10P1Q8NGE3 313 aa10.29□□□□□ -0.76
VPS33B-201ENST00000333371 TMEM37Q8WXS4 190 aa10.29□□□□□ -0.76
VPS33B-201ENST00000333371 MEGF10Q96KG7 1140 aa10.29□□□□□ -0.76
VPS33B-201ENST00000333371 TMEM147Q9BVK8 224 aa10.29□□□□□ -0.76
VPS33B-201ENST00000333371 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.29□□□□□ -0.76
VPS33B-201ENST00000333371 PSG11Q9UQ72 335 aa10.29□□□□□ -0.76
VPS33B-201ENST00000333371 CEP250Q9BV73 2442 aa10.29□□□□□ -0.76
VPS33B-201ENST00000333371 ARFGEF3Q5TH69 2177 aa10.29□□□□□ -0.76
VPS33B-201ENST00000333371 AMBPP02760 352 aa10.28□□□□□ -0.76
VPS33B-201ENST00000333371 CHRNA7P36544 502 aa10.28□□□□□ -0.76
VPS33B-201ENST00000333371 TNFSF10P50591 281 aa10.28□□□□□ -0.76
VPS33B-201ENST00000333371 TMEM204Q9BSN7 226 aa10.28□□□□□ -0.76
VPS33B-201ENST00000333371 DERL1Q9BUN8 251 aa10.28□□□□□ -0.76
VPS33B-201ENST00000333371 SMCO3A2RU48 225 aa10.28□□□□□ -0.76
VPS33B-201ENST00000333371 RNF212BA8MTL3 300 aa10.28□□□□□ -0.76
VPS33B-201ENST00000333371 FAM90A26D6RGX4 464 aa10.28□□□□□ -0.76
VPS33B-201ENST00000333371 GATCO43716 136 aaKnown RBP10.28□□□□□ -0.76
VPS33B-201ENST00000333371 SOX15O60248 233 aa10.28□□□□□ -0.76
VPS33B-201ENST00000333371 FAM3BP58499 235 aaPredicted RBP10.28□□□□□ -0.76
VPS33B-201ENST00000333371 EDDM3AQ14507 147 aa10.28□□□□□ -0.76
VPS33B-201ENST00000333371 MSMO1Q15800 293 aa10.28□□□□□ -0.76
VPS33B-201ENST00000333371 FIP1L1Q6UN15 594 aaKnown RBP10.28□□□□□ -0.76
VPS33B-201ENST00000333371 ZNF66Q6ZN08 573 aa10.28□□□□□ -0.76
VPS33B-201ENST00000333371 H2BFWTQ7Z2G1 175 aa10.28□□□□□ -0.76
VPS33B-201ENST00000333371 VKORC1L1Q8N0U8 176 aa10.28□□□□□ -0.76
VPS33B-201ENST00000333371 QTRT1Q9BXR0 403 aaKnown RBP10.28□□□□□ -0.76
VPS33B-201ENST00000333371 CTDSP1Q9GZU7 261 aa10.28□□□□□ -0.76
VPS33B-201ENST00000333371 SRD5A3Q9H8P0 318 aa10.28□□□□□ -0.76
VPS33B-201ENST00000333371 MGAQ8IWI9 3026 aa10.28□□□□□ -0.76
VPS33B-201ENST00000333371 PLCE1Q9P212 2302 aa10.28□□□□□ -0.76
VPS33B-201ENST00000333371 XKRY2A2RUG3 117 aa10.27□□□□□ -0.76
VPS33B-201ENST00000333371 GYPAP02724 150 aa10.27□□□□□ -0.76
VPS33B-201ENST00000333371 FABP6P51161 128 aa10.27□□□□□ -0.76
VPS33B-201ENST00000333371 ACSF3Q4G176 576 aaPredicted RBP10.27□□□□□ -0.76
VPS33B-201ENST00000333371 CNEP1R1Q8N9A8 125 aa10.27□□□□□ -0.76
VPS33B-201ENST00000333371 NINJ1Q92982 152 aa10.27□□□□□ -0.76
VPS33B-201ENST00000333371 PARD6GQ9BYG4 376 aaPredicted RBP10.27□□□□□ -0.76
VPS33B-201ENST00000333371 PITPNC1Q9UKF7 332 aa10.27□□□□□ -0.76
VPS33B-201ENST00000333371 FUT9Q9Y231 359 aa10.27□□□□□ -0.76
VPS33B-201ENST00000333371 TIMM9Q9Y5J7 89 aa10.27□□□□□ -0.76
VPS33B-201ENST00000333371 PIGBOS1A0A0B4J2F0 54 aa10.27□□□□□ -0.77
VPS33B-201ENST00000333371 OR9G9P0C7N8 305 aa10.27□□□□□ -0.77
VPS33B-201ENST00000333371 ATP5G3P48201 142 aa10.27□□□□□ -0.77
VPS33B-201ENST00000333371 EDDM3BP56851 147 aa10.27□□□□□ -0.77
VPS33B-201ENST00000333371 SOX8P57073 446 aa10.27□□□□□ -0.77
VPS33B-201ENST00000333371 CENPVQ7Z7K6 275 aaPredicted RBP10.27□□□□□ -0.77
VPS33B-201ENST00000333371 TMEM183AQ8IXX5 376 aa10.27□□□□□ -0.77
VPS33B-201ENST00000333371 FDCSPQ8NFU4 85 aa10.27□□□□□ -0.77
VPS33B-201ENST00000333371 AGMATQ9BSE5 352 aa10.27□□□□□ -0.77
VPS33B-201ENST00000333371 ZDHHC11Q9H8X9 412 aa10.27□□□□□ -0.77
VPS33B-201ENST00000333371 PATZ1Q9HBE1 687 aaKnown RBP10.27□□□□□ -0.77
VPS33B-201ENST00000333371 ASCL3Q9NQ33 180 aa10.27□□□□□ -0.77
VPS33B-201ENST00000333371 YLPM1P49750 1951 aaKnown RBP10.27□□□□□ -0.77
VPS33B-201ENST00000333371 A0A1B0GUS0 222 aa10.26□□□□□ -0.77
VPS33B-201ENST00000333371 A0A1B0GV90 55 aa10.26□□□□□ -0.77
VPS33B-201ENST00000333371 IQCF6A8MYZ5 107 aa10.26□□□□□ -0.77
VPS33B-201ENST00000333371 ALKBH2Q6NS38 261 aa10.26□□□□□ -0.77
VPS33B-201ENST00000333371 Q8N7P7 452 aa10.26□□□□□ -0.77
VPS33B-201ENST00000333371 OR1P1Q8NH06 330 aa10.26□□□□□ -0.77
VPS33B-201ENST00000333371 HES4Q9HCC6 221 aa10.26□□□□□ -0.77
VPS33B-201ENST00000333371 DSCAMO60469 2012 aa10.26□□□□□ -0.77
VPS33B-201ENST00000333371 ROS1P08922 2347 aa10.26□□□□□ -0.77
VPS33B-201ENST00000333371 OOEPA6NGQ2 149 aa10.26□□□□□ -0.77
VPS33B-201ENST00000333371 MARCH11A6NNE9 402 aa10.26□□□□□ -0.77
VPS33B-201ENST00000333371 PPP5D1E7EU14 171 aa10.26□□□□□ -0.77
VPS33B-201ENST00000333371 PROP1O75360 226 aa10.26□□□□□ -0.77
VPS33B-201ENST00000333371 COX5AP20674 150 aa10.26□□□□□ -0.77
VPS33B-201ENST00000333371 GNB2P62879 340 aa10.26□□□□□ -0.77
VPS33B-201ENST00000333371 CATR1Q13166 79 aa10.26□□□□□ -0.77
VPS33B-201ENST00000333371 MRPL49Q13405 166 aaKnown RBP10.26□□□□□ -0.77
VPS33B-201ENST00000333371 UTF1Q5T230 341 aa10.26□□□□□ -0.77
VPS33B-201ENST00000333371 WDR82Q6UXN9 313 aa10.26□□□□□ -0.77
VPS33B-201ENST00000333371 ACP7Q6ZNF0 438 aa10.26□□□□□ -0.77
VPS33B-201ENST00000333371 SDSLQ96GA7 329 aa10.26□□□□□ -0.77
VPS33B-201ENST00000333371 OR5B12Q96R08 314 aa10.26□□□□□ -0.77
VPS33B-201ENST00000333371 PYGO2Q9BRQ0 406 aa10.26□□□□□ -0.77
VPS33B-201ENST00000333371 ACTR3CQ9C0K3 210 aaPredicted RBP10.26□□□□□ -0.77
VPS33B-201ENST00000333371 C15orf62A8K5M9 175 aa10.26□□□□□ -0.77
VPS33B-201ENST00000333371 C11orf94C9JXX5 98 aa10.26□□□□□ -0.77
VPS33B-201ENST00000333371 CLDN14O95500 239 aa10.26□□□□□ -0.77
VPS33B-201ENST00000333371 GZMBP10144 247 aa10.26□□□□□ -0.77
VPS33B-201ENST00000333371 HNF1AP20823 631 aa10.26□□□□□ -0.77
VPS33B-201ENST00000333371 DDTP30046 118 aa10.26□□□□□ -0.77
VPS33B-201ENST00000333371 CST9LP1Q5W188 147 aa10.26□□□□□ -0.77
VPS33B-201ENST00000333371 ZNF709Q8N972 641 aa10.26□□□□□ -0.77
VPS33B-201ENST00000333371 ZNF114Q8NC26 417 aa10.26□□□□□ -0.77
VPS33B-201ENST00000333371 A0A087X0M5 115 aa10.25□□□□□ -0.77
VPS33B-201ENST00000333371 A0A1B0GX30 115 aa10.25□□□□□ -0.77
VPS33B-201ENST00000333371 TMEM250H0YL14 139 aa10.25□□□□□ -0.77
VPS33B-201ENST00000333371 RNF224P0DH78 156 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms