RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 PSPNO60542 156 aa19.77■□□□□ 0.76
TSKU-201ENST00000333090 SERPINA7P05543 415 aa19.77■□□□□ 0.76
TSKU-201ENST00000333090 CD99P14209 185 aa19.77■□□□□ 0.76
TSKU-201ENST00000333090 CD33P20138 364 aa19.77■□□□□ 0.76
TSKU-201ENST00000333090 MAGEA5P43359 124 aa19.77■□□□□ 0.76
TSKU-201ENST00000333090 EDDM3BP56851 147 aa19.77■□□□□ 0.76
TSKU-201ENST00000333090 TMPRSS2O15393 492 aa19.77■□□□□ 0.76
TSKU-201ENST00000333090 VWC2Q2TAL6 325 aa19.77■□□□□ 0.76
TSKU-201ENST00000333090 ZBTB34Q8NCN2 500 aa19.77■□□□□ 0.76
TSKU-201ENST00000333090 GRIFINA4D1Z8 144 aa19.76■□□□□ 0.75
TSKU-201ENST00000333090 RBFOX2O43251 390 aaKnown RBP eCLIP19.76■□□□□ 0.75
TSKU-201ENST00000333090 RPL29P47914 159 aaKnown RBP19.76■□□□□ 0.75
TSKU-201ENST00000333090 MCEMP1Q8IX19 187 aa19.76■□□□□ 0.75
TSKU-201ENST00000333090 TMEM204Q9BSN7 226 aa19.76■□□□□ 0.75
TSKU-201ENST00000333090 COLQQ9Y215 455 aaPredicted RBP19.76■□□□□ 0.75
TSKU-201ENST00000333090 KIR2DL5BA0A0G2JN68 375 aa19.76■□□□□ 0.75
TSKU-201ENST00000333090 KIR2DL5BA0A0G2JPC4 375 aa19.76■□□□□ 0.75
TSKU-201ENST00000333090 A0A1W2PPV4 95 aa19.76■□□□□ 0.75
TSKU-201ENST00000333090 GRPP07492 148 aa19.76■□□□□ 0.75
TSKU-201ENST00000333090 HNF1AP20823 631 aa19.76■□□□□ 0.75
TSKU-201ENST00000333090 CD82P27701 267 aa19.76■□□□□ 0.75
TSKU-201ENST00000333090 OR10J1P30954 320 aa19.76■□□□□ 0.75
TSKU-201ENST00000333090 ZNF146Q15072 292 aa19.76■□□□□ 0.75
TSKU-201ENST00000333090 MDP1Q86V88 176 aa19.76■□□□□ 0.75
TSKU-201ENST00000333090 KIR2DL5AQ8N109 375 aa19.76■□□□□ 0.75
TSKU-201ENST00000333090 SDSLQ96GA7 329 aa19.76■□□□□ 0.75
TSKU-201ENST00000333090 SFRP2Q96HF1 295 aa19.76■□□□□ 0.75
TSKU-201ENST00000333090 PATZ1Q9HBE1 687 aaKnown RBP19.76■□□□□ 0.75
TSKU-201ENST00000333090 SPENQ96T58 3664 aaKnown RBP19.76■□□□□ 0.75
TSKU-201ENST00000333090 CLDN14O95500 239 aa19.75■□□□□ 0.75
TSKU-201ENST00000333090 FOXL1Q12952 345 aa19.75■□□□□ 0.75
TSKU-201ENST00000333090 LRP11Q86VZ4 500 aa19.75■□□□□ 0.75
TSKU-201ENST00000333090 NINJ1Q92982 152 aa19.75■□□□□ 0.75
TSKU-201ENST00000333090 TBX15Q96SF7 602 aa19.75■□□□□ 0.75
TSKU-201ENST00000333090 FAM173AQ9BQD7 235 aa19.75■□□□□ 0.75
TSKU-201ENST00000333090 ELOVL5Q9NYP7 299 aa19.75■□□□□ 0.75
TSKU-201ENST00000333090 B4GALT7Q9UBV7 327 aa19.75■□□□□ 0.75
TSKU-201ENST00000333090 HAND1O96004 215 aa19.75■□□□□ 0.75
TSKU-201ENST00000333090 ADMP35318 185 aa19.75■□□□□ 0.75
TSKU-201ENST00000333090 SOX8P57073 446 aa19.75■□□□□ 0.75
TSKU-201ENST00000333090 TMPRSS7Q7RTY8 843 aa19.75■□□□□ 0.75
TSKU-201ENST00000333090 Q8N7P7 452 aa19.75■□□□□ 0.75
TSKU-201ENST00000333090 TMEM105Q8N8V8 129 aa19.75■□□□□ 0.75
TSKU-201ENST00000333090 BTF3L4Q96K17 158 aa19.75■□□□□ 0.75
TSKU-201ENST00000333090 MDFIC2A0A1B0GVS7 189 aa19.75■□□□□ 0.75
TSKU-201ENST00000333090 TMEM210A6NLX4 147 aa19.75■□□□□ 0.75
TSKU-201ENST00000333090 NEURL1O76050 574 aa19.75■□□□□ 0.75
TSKU-201ENST00000333090 HOXA4Q00056 320 aaPredicted RBP19.75■□□□□ 0.75
TSKU-201ENST00000333090 CYB5R2Q6BCY4 276 aa19.75■□□□□ 0.75
TSKU-201ENST00000333090 KCNIP2Q9NS61 270 aa19.75■□□□□ 0.75
TSKU-201ENST00000333090 TMEM30CPA0ZSE6 113 aa19.74■□□□□ 0.75
TSKU-201ENST00000333090 RAB29O14966 203 aa19.74■□□□□ 0.75
TSKU-201ENST00000333090 HBZP02008 142 aa19.74■□□□□ 0.75
TSKU-201ENST00000333090 CD1BP29016 333 aa19.74■□□□□ 0.75
TSKU-201ENST00000333090 TDGF1P3P51864 188 aa19.74■□□□□ 0.75
TSKU-201ENST00000333090 AESQ08117 197 aa19.74■□□□□ 0.75
TSKU-201ENST00000333090 ZNF705AQ6ZN79 300 aaPredicted RBP19.74■□□□□ 0.75
TSKU-201ENST00000333090 OR2J1Q9GZK6 312 aa19.74■□□□□ 0.75
TSKU-201ENST00000333090 TRBV20OR9-2A0A075B6H5 130 aa19.74■□□□□ 0.75
TSKU-201ENST00000333090 F6UZH7 168 aa19.74■□□□□ 0.75
TSKU-201ENST00000333090 EIF4EBP1Q13541 118 aaPredicted RBP19.74■□□□□ 0.75
TSKU-201ENST00000333090 ALKBH6Q3KRA9 238 aa19.74■□□□□ 0.75
TSKU-201ENST00000333090 CMTM2Q8TAZ6 248 aa19.74■□□□□ 0.75
TSKU-201ENST00000333090 CT55Q8WUE5 264 aa19.74■□□□□ 0.75
TSKU-201ENST00000333090 IMMP2LQ96T52 175 aa19.74■□□□□ 0.75
TSKU-201ENST00000333090 C15orf62A8K5M9 175 aa19.73■□□□□ 0.75
TSKU-201ENST00000333090 RAB4AP20338 218 aa19.73■□□□□ 0.75
TSKU-201ENST00000333090 IER2Q9BTL4 223 aa19.73■□□□□ 0.75
TSKU-201ENST00000333090 ZDHHC11Q9H8X9 412 aa19.73■□□□□ 0.75
TSKU-201ENST00000333090 KNTC1P50748 2209 aa19.73■□□□□ 0.75
TSKU-201ENST00000333090 ZFHX4Q86UP3 3567 aa19.73■□□□□ 0.75
TSKU-201ENST00000333090 ZNF25P17030 456 aaPredicted RBP19.73■□□□□ 0.75
TSKU-201ENST00000333090 KITLGP21583 273 aa19.73■□□□□ 0.75
TSKU-201ENST00000333090 MRGPRDQ8TDS7 321 aa19.73■□□□□ 0.75
TSKU-201ENST00000333090 ZCCHC14Q8WYQ9 949 aaKnown RBP19.73■□□□□ 0.75
TSKU-201ENST00000333090 TMEM68Q96MH6 324 aa19.73■□□□□ 0.75
TSKU-201ENST00000333090 DIRC2Q96SL1 478 aa19.73■□□□□ 0.75
TSKU-201ENST00000333090 WDR83OSQ9Y284 106 aa19.73■□□□□ 0.75
TSKU-201ENST00000333090 LINC00473A8K010 186 aa19.72■□□□□ 0.75
TSKU-201ENST00000333090 TOMM20LQ6UXN7 152 aa19.72■□□□□ 0.75
TSKU-201ENST00000333090 CXorf67Q86X51 503 aaPredicted RBP19.72■□□□□ 0.75
TSKU-201ENST00000333090 GP6Q9HCN6 339 aa19.72■□□□□ 0.75
TSKU-201ENST00000333090 MARCH11A6NNE9 402 aa19.72■□□□□ 0.75
TSKU-201ENST00000333090 SSPNQ14714 243 aa19.72■□□□□ 0.75
TSKU-201ENST00000333090 TIPARPQ7Z3E1 657 aaKnown RBP19.72■□□□□ 0.75
TSKU-201ENST00000333090 QTRT1Q9BXR0 403 aaKnown RBP19.72■□□□□ 0.75
TSKU-201ENST00000333090 IGHV3-43A0A0B4J1X8 118 aa19.71■□□□□ 0.75
TSKU-201ENST00000333090 HPRT1P00492 218 aa19.71■□□□□ 0.75
TSKU-201ENST00000333090 TFF1P04155 84 aa19.71■□□□□ 0.75
TSKU-201ENST00000333090 CELA3BP08861 270 aa19.71■□□□□ 0.75
TSKU-201ENST00000333090 IGHV3-43DP0DP04 118 aa19.71■□□□□ 0.75
TSKU-201ENST00000333090 GABRA2P47869 451 aa19.71■□□□□ 0.75
TSKU-201ENST00000333090 TTTY12Q9BZ98 90 aa19.71■□□□□ 0.75
TSKU-201ENST00000333090 RYDENQ9NUL5 291 aaKnown RBP19.71■□□□□ 0.75
TSKU-201ENST00000333090 WNT9BO14905 357 aa19.71■□□□□ 0.75
TSKU-201ENST00000333090 ARL14EPLP0DKL9 152 aa19.71■□□□□ 0.75
TSKU-201ENST00000333090 THBS3P49746 956 aa19.71■□□□□ 0.75
TSKU-201ENST00000333090 DCAF12Q5T6F0 453 aa19.71■□□□□ 0.75
TSKU-201ENST00000333090 PCSK5Q92824 1860 aa19.7■□□□□ 0.74
TSKU-201ENST00000333090 DEFB108AA8MXU0 73 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms