RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 ZIC4Q8N9L1 334 aa20.49■□□□□ 0.87
SOX1-201ENST00000330949 A0A1W2PS18 150 aa20.49■□□□□ 0.87
SOX1-201ENST00000330949 IGLV2-14P01704 120 aa20.49■□□□□ 0.87
SOX1-201ENST00000330949 C3orf79P0CE67 100 aa20.49■□□□□ 0.87
SOX1-201ENST00000330949 RPEL1Q2QD12 228 aa20.49■□□□□ 0.87
SOX1-201ENST00000330949 PRAMEF20Q5VT98 475 aa20.49■□□□□ 0.87
SOX1-201ENST00000330949 C19orf35Q6ZS72 473 aa20.49■□□□□ 0.87
SOX1-201ENST00000330949 FGFRL1Q8N441 504 aa20.49■□□□□ 0.87
SOX1-201ENST00000330949 IGHV3-15A0A0B4J1V0 119 aa20.49■□□□□ 0.87
SOX1-201ENST00000330949 ZNF324O75467 553 aaPredicted RBP20.49■□□□□ 0.87
SOX1-201ENST00000330949 S1PR2O95136 353 aa20.49■□□□□ 0.87
SOX1-201ENST00000330949 ZNF32P17041 273 aa20.49■□□□□ 0.87
SOX1-201ENST00000330949 TRIP6Q15654 476 aaKnown RBP20.49■□□□□ 0.87
SOX1-201ENST00000330949 PMCHL1Q16048 86 aa20.49■□□□□ 0.87
SOX1-201ENST00000330949 VWC2Q2TAL6 325 aa20.49■□□□□ 0.87
SOX1-201ENST00000330949 SLC25A45Q8N413 288 aa20.49■□□□□ 0.87
SOX1-201ENST00000330949 WNT10AQ9GZT5 417 aa20.49■□□□□ 0.87
SOX1-201ENST00000330949 A0A1W2PPV4 95 aa20.48■□□□□ 0.87
SOX1-201ENST00000330949 PMS2P5A8MQ11 134 aa20.48■□□□□ 0.87
SOX1-201ENST00000330949 VAMP3Q15836 100 aa20.48■□□□□ 0.87
SOX1-201ENST00000330949 C20orf204Q6ZNR8 217 aa20.48■□□□□ 0.87
SOX1-201ENST00000330949 IL1F10Q8WWZ1 152 aa20.48■□□□□ 0.87
SOX1-201ENST00000330949 M0QZ24 198 aa20.48■□□□□ 0.87
SOX1-201ENST00000330949 SLC17A3O00476 420 aa20.48■□□□□ 0.87
SOX1-201ENST00000330949 GDF9O60383 454 aa20.48■□□□□ 0.87
SOX1-201ENST00000330949 HTD2P86397 168 aa20.48■□□□□ 0.87
SOX1-201ENST00000330949 WDR73Q6P4I2 378 aa20.48■□□□□ 0.87
SOX1-201ENST00000330949 LOXL4Q96JB6 756 aa20.48■□□□□ 0.87
SOX1-201ENST00000330949 HS3ST6Q96QI5 342 aa20.48■□□□□ 0.87
SOX1-201ENST00000330949 RBM7Q9Y580 266 aaKnown RBP20.48■□□□□ 0.87
SOX1-201ENST00000330949 ANKRD37Q7Z713 158 aa20.47■□□□□ 0.87
SOX1-201ENST00000330949 AKIRIN1Q9H9L7 192 aaPredicted RBP20.47■□□□□ 0.87
SOX1-201ENST00000330949 IL36RNQ9UBH0 155 aa20.47■□□□□ 0.87
SOX1-201ENST00000330949 C17orf82Q86X59 251 aaPredicted RBP20.47■□□□□ 0.87
SOX1-201ENST00000330949 OR56B2PQ8NGI1 322 aa20.47■□□□□ 0.87
SOX1-201ENST00000330949 OR5A2Q8NGI9 324 aa20.47■□□□□ 0.87
SOX1-201ENST00000330949 BORCS7Q96B45 105 aa20.47■□□□□ 0.87
SOX1-201ENST00000330949 NAT8BQ9UHF3 227 aa20.47■□□□□ 0.87
SOX1-201ENST00000330949 URB1O60287 2271 aaKnown RBP20.47■□□□□ 0.87
SOX1-201ENST00000330949 IGLC7A0M8Q6 106 aa20.46■□□□□ 0.87
SOX1-201ENST00000330949 NPIPB11E5RHQ5 1161 aa20.46■□□□□ 0.87
SOX1-201ENST00000330949 ZNF83P51522 516 aa20.46■□□□□ 0.87
SOX1-201ENST00000330949 STUMQ69YW2 141 aa20.46■□□□□ 0.87
SOX1-201ENST00000330949 MMD2Q8IY49 270 aa20.46■□□□□ 0.87
SOX1-201ENST00000330949 UCN2Q96RP3 112 aa20.46■□□□□ 0.87
SOX1-201ENST00000330949 TRAPPC2LH3BP13 241 aa20.46■□□□□ 0.87
SOX1-201ENST00000330949 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP20.46■□□□□ 0.87
SOX1-201ENST00000330949 NXPH1P58417 271 aa20.46■□□□□ 0.87
SOX1-201ENST00000330949 DCAF12Q5T6F0 453 aa20.46■□□□□ 0.87
SOX1-201ENST00000330949 FADS6Q8N9I5 356 aa20.46■□□□□ 0.87
SOX1-201ENST00000330949 FSCN3Q9NQT6 498 aa20.46■□□□□ 0.87
SOX1-201ENST00000330949 KCNS2Q9ULS6 477 aa20.46■□□□□ 0.87
SOX1-201ENST00000330949 OCIAD2Q56VL3 154 aa20.45■□□□□ 0.86
SOX1-201ENST00000330949 OR1A1Q9P1Q5 309 aa20.45■□□□□ 0.86
SOX1-201ENST00000330949 CLN8Q9UBY8 286 aa20.45■□□□□ 0.86
SOX1-201ENST00000330949 EML6Q6ZMW3 1958 aa20.45■□□□□ 0.86
SOX1-201ENST00000330949 TRAV38-1A0A0B4J264 116 aa20.45■□□□□ 0.86
SOX1-201ENST00000330949 SCO2A0A1W2PP80 73 aa20.45■□□□□ 0.86
SOX1-201ENST00000330949 COX19Q49B96 90 aa20.45■□□□□ 0.86
SOX1-201ENST00000330949 UHRF2Q96PU4 802 aa20.45■□□□□ 0.86
SOX1-201ENST00000330949 CST9LQ9H4G1 147 aa20.45■□□□□ 0.86
SOX1-201ENST00000330949 TMEM38BQ9NVV0 291 aa20.45■□□□□ 0.86
SOX1-201ENST00000330949 ZNF407Q9C0G0 2248 aa20.45■□□□□ 0.86
SOX1-201ENST00000330949 G3V3Y1 287 aa20.45■□□□□ 0.86
SOX1-201ENST00000330949 RHOGP84095 191 aa20.45■□□□□ 0.86
SOX1-201ENST00000330949 LDLRAD2Q5SZI1 272 aa20.45■□□□□ 0.86
SOX1-201ENST00000330949 MKXQ8IYA7 352 aa20.45■□□□□ 0.86
SOX1-201ENST00000330949 CSTL1Q9H114 145 aa20.45■□□□□ 0.86
SOX1-201ENST00000330949 PATE4P0C8F1 98 aa20.44■□□□□ 0.86
SOX1-201ENST00000330949 GFRA1P56159 465 aa20.44■□□□□ 0.86
SOX1-201ENST00000330949 NIT1Q86X76 327 aa20.44■□□□□ 0.86
SOX1-201ENST00000330949 SPSB4Q96A44 273 aa20.44■□□□□ 0.86
SOX1-201ENST00000330949 RCHY1Q96PM5 261 aa20.44■□□□□ 0.86
SOX1-201ENST00000330949 A0A1W2PRS3 328 aa20.44■□□□□ 0.86
SOX1-201ENST00000330949 WDR74Q6RFH5 385 aaPredicted RBP20.44■□□□□ 0.86
SOX1-201ENST00000330949 LINC00596Q86U02 117 aa20.44■□□□□ 0.86
SOX1-201ENST00000330949 MTCH1Q9NZJ7 389 aa20.44■□□□□ 0.86
SOX1-201ENST00000330949 OR5B21A6NL26 309 aa20.43■□□□□ 0.86
SOX1-201ENST00000330949 ST6GALNAC3Q8NDV1 305 aa20.43■□□□□ 0.86
SOX1-201ENST00000330949 ZNF576Q9H609 170 aa20.43■□□□□ 0.86
SOX1-201ENST00000330949 B4GALT1P15291 398 aa20.43■□□□□ 0.86
SOX1-201ENST00000330949 CARD18P57730 90 aa20.43■□□□□ 0.86
SOX1-201ENST00000330949 PSG7Q13046 419 aa20.43■□□□□ 0.86
SOX1-201ENST00000330949 MUC15Q8N387 334 aa20.43■□□□□ 0.86
SOX1-201ENST00000330949 MRPL27Q9P0M9 148 aaKnown RBP20.43■□□□□ 0.86
SOX1-201ENST00000330949 RNF24Q9Y225 148 aa20.43■□□□□ 0.86
SOX1-201ENST00000330949 CHTOPQ9Y3Y2 248 aaKnown RBP20.43■□□□□ 0.86
SOX1-201ENST00000330949 LY96Q9Y6Y9 160 aa20.43■□□□□ 0.86
SOX1-201ENST00000330949 K7EN84 100 aa20.42■□□□□ 0.86
SOX1-201ENST00000330949 FRMD6-AS1P0C7T7 363 aa20.42■□□□□ 0.86
SOX1-201ENST00000330949 TMEM11P17152 192 aa20.42■□□□□ 0.86
SOX1-201ENST00000330949 GABRA2P47869 451 aa20.42■□□□□ 0.86
SOX1-201ENST00000330949 GPM6AP51674 278 aa20.42■□□□□ 0.86
SOX1-201ENST00000330949 OR2H1Q9GZK4 316 aa20.42■□□□□ 0.86
SOX1-201ENST00000330949 CTNNBIP1Q9NSA3 81 aaPredicted RBP20.42■□□□□ 0.86
SOX1-201ENST00000330949 LRRC30A6NM36 301 aa20.42■□□□□ 0.86
SOX1-201ENST00000330949 CA2P00918 260 aa20.42■□□□□ 0.86
SOX1-201ENST00000330949 TGFBR3Q03167 851 aa20.42■□□□□ 0.86
SOX1-201ENST00000330949 OR8I2Q8N0Y5 310 aa20.42■□□□□ 0.86
SOX1-201ENST00000330949 IFI44Q8TCB0 444 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms