RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 TMEM155Q4W5P6 130 aa12.25□□□□□ -0.45
TPM3-205ENST00000328159 ZNF383Q8NA42 475 aa12.25□□□□□ -0.45
TPM3-205ENST00000328159 RAB39BQ96DA2 213 aa12.25□□□□□ -0.45
TPM3-205ENST00000328159 LINC00052Q96N35 136 aa12.25□□□□□ -0.45
TPM3-205ENST00000328159 PARP11Q9NR21 331 aa12.25□□□□□ -0.45
TPM3-205ENST00000328159 TRBV23-1A0A0A0MS06 115 aa12.24□□□□□ -0.45
TPM3-205ENST00000328159 RAB19A4D1S5 217 aa12.24□□□□□ -0.45
TPM3-205ENST00000328159 NUDT19A8MXV4 375 aa12.24□□□□□ -0.45
TPM3-205ENST00000328159 RBMXL2O75526 392 aaKnown RBP12.24□□□□□ -0.45
TPM3-205ENST00000328159 DFFBO76075 338 aa12.24□□□□□ -0.45
TPM3-205ENST00000328159 SOD3P08294 240 aa12.24□□□□□ -0.45
TPM3-205ENST00000328159 METTL15P1P0C7V9 234 aa12.24□□□□□ -0.45
TPM3-205ENST00000328159 ARHGDIBP52566 201 aa12.24□□□□□ -0.45
TPM3-205ENST00000328159 SPANXN5Q5MJ07 72 aa12.24□□□□□ -0.45
TPM3-205ENST00000328159 SSX9Q7RTT3 188 aa12.24□□□□□ -0.45
TPM3-205ENST00000328159 MMP26Q9NRE1 261 aa12.24□□□□□ -0.45
TPM3-205ENST00000328159 ZNRD1Q9P1U0 126 aa12.24□□□□□ -0.45
TPM3-205ENST00000328159 NBEAQ8NFP9 2946 aa12.24□□□□□ -0.45
TPM3-205ENST00000328159 KRBOX1C9JBD0 128 aa12.23□□□□□ -0.45
TPM3-205ENST00000328159 DANCRP0C864 163 aa12.23□□□□□ -0.45
TPM3-205ENST00000328159 ATP6V0CP27449 155 aa12.23□□□□□ -0.45
TPM3-205ENST00000328159 AVPI1Q5T686 147 aa12.23□□□□□ -0.45
TPM3-205ENST00000328159 Q6ZRG5 221 aa12.23□□□□□ -0.45
TPM3-205ENST00000328159 HAPLN4Q86UW8 402 aa12.23□□□□□ -0.45
TPM3-205ENST00000328159 STPG2Q8N412 459 aa12.23□□□□□ -0.45
TPM3-205ENST00000328159 NEU4Q8WWR8 484 aaPredicted RBP12.23□□□□□ -0.45
TPM3-205ENST00000328159 QTRT1Q9BXR0 403 aaKnown RBP12.23□□□□□ -0.45
TPM3-205ENST00000328159 HRH4Q9H3N8 390 aa12.23□□□□□ -0.45
TPM3-205ENST00000328159 RALYQ9UKM9 306 aaKnown RBP12.23□□□□□ -0.45
TPM3-205ENST00000328159 ACACBO00763 2458 aa12.23□□□□□ -0.45
TPM3-205ENST00000328159 DOCK11Q5JSL3 2073 aa12.23□□□□□ -0.45
TPM3-205ENST00000328159 SHOXO15266 292 aa12.23□□□□□ -0.45
TPM3-205ENST00000328159 CRYZL1O95825 349 aa12.23□□□□□ -0.45
TPM3-205ENST00000328159 ARL16Q0P5N6 197 aa12.23□□□□□ -0.45
TPM3-205ENST00000328159 AARDQ4LEZ3 155 aa12.23□□□□□ -0.45
TPM3-205ENST00000328159 UQCC3Q6UW78 93 aa12.23□□□□□ -0.45
TPM3-205ENST00000328159 BTNL8Q6UX41 500 aa12.23□□□□□ -0.45
TPM3-205ENST00000328159 TMEM14EPQ6UXP3 125 aa12.23□□□□□ -0.45
TPM3-205ENST00000328159 IL34Q6ZMJ4 242 aa12.23□□□□□ -0.45
TPM3-205ENST00000328159 ZNF833PQ6ZTB9 187 aa12.23□□□□□ -0.45
TPM3-205ENST00000328159 DTX2Q86UW9 622 aa12.23□□□□□ -0.45
TPM3-205ENST00000328159 CCDC28AQ8IWP9 274 aa12.23□□□□□ -0.45
TPM3-205ENST00000328159 VKORC1L1Q8N0U8 176 aa12.23□□□□□ -0.45
TPM3-205ENST00000328159 C8orf31Q8N9H6 132 aa12.23□□□□□ -0.45
TPM3-205ENST00000328159 DTD1Q8TEA8 209 aa12.23□□□□□ -0.45
TPM3-205ENST00000328159 CIB3Q96Q77 187 aaPredicted RBP12.23□□□□□ -0.45
TPM3-205ENST00000328159 TMEM140Q9NV12 185 aa12.23□□□□□ -0.45
TPM3-205ENST00000328159 CACFD1Q9UGQ2 172 aa12.23□□□□□ -0.45
TPM3-205ENST00000328159 KALRNO60229 2985 aa12.22□□□□□ -0.45
TPM3-205ENST00000328159 CEBPZOSA8MTT3 80 aa12.22□□□□□ -0.45
TPM3-205ENST00000328159 IFNA5P01569 189 aa12.22□□□□□ -0.45
TPM3-205ENST00000328159 CT45A6P0DMU7 189 aa12.22□□□□□ -0.45
TPM3-205ENST00000328159 CT45A5P0DMU8 189 aa12.22□□□□□ -0.45
TPM3-205ENST00000328159 CT45A7P0DMV0 189 aa12.22□□□□□ -0.45
TPM3-205ENST00000328159 RAB5CP51148 216 aa12.22□□□□□ -0.45
TPM3-205ENST00000328159 OR2B8PP59922 312 aa12.22□□□□□ -0.45
TPM3-205ENST00000328159 HBG1P69891 147 aa12.22□□□□□ -0.45
TPM3-205ENST00000328159 HBG2P69892 147 aa12.22□□□□□ -0.45
TPM3-205ENST00000328159 ZNF841Q6ZN19 808 aa12.22□□□□□ -0.45
TPM3-205ENST00000328159 TMEM182Q6ZP80 229 aaPredicted RBP12.22□□□□□ -0.45
TPM3-205ENST00000328159 OR4A16Q8NH70 328 aa12.22□□□□□ -0.45
TPM3-205ENST00000328159 ZDHHC16Q969W1 377 aa12.22□□□□□ -0.45
TPM3-205ENST00000328159 GNPNAT1Q96EK6 184 aaPredicted RBP12.22□□□□□ -0.45
TPM3-205ENST00000328159 OR4C12Q96R67 309 aa12.22□□□□□ -0.45
TPM3-205ENST00000328159 STRAPQ9Y3F4 350 aaKnown RBP12.22□□□□□ -0.45
TPM3-205ENST00000328159 A0A1W2PPR1 153 aa12.21□□□□□ -0.45
TPM3-205ENST00000328159 C19orf84I3L1E1 186 aa12.21□□□□□ -0.45
TPM3-205ENST00000328159 LY6HO94772 140 aa12.21□□□□□ -0.45
TPM3-205ENST00000328159 CAMLGP49069 296 aa12.21□□□□□ -0.45
TPM3-205ENST00000328159 RELBQ01201 579 aa12.21□□□□□ -0.45
TPM3-205ENST00000328159 PJVKQ0ZLH3 352 aa12.21□□□□□ -0.45
TPM3-205ENST00000328159 LINC00311Q8N616 119 aa12.21□□□□□ -0.45
TPM3-205ENST00000328159 ZNF525Q8N782 197 aa12.21□□□□□ -0.45
TPM3-205ENST00000328159 BPIFCQ8NFQ6 507 aa12.21□□□□□ -0.45
TPM3-205ENST00000328159 OR2G3Q8NGZ4 309 aa12.21□□□□□ -0.45
TPM3-205ENST00000328159 ZNF596Q8TC21 504 aa12.21□□□□□ -0.45
TPM3-205ENST00000328159 TSNAXQ99598 290 aaKnown RBP12.21□□□□□ -0.45
TPM3-205ENST00000328159 RFNGQ9Y644 331 aa12.21□□□□□ -0.45
TPM3-205ENST00000328159 A0A087X0M5 115 aa12.2□□□□□ -0.46
TPM3-205ENST00000328159 A0A1B0GX30 115 aa12.2□□□□□ -0.46
TPM3-205ENST00000328159 IFNA17P01571 189 aa12.2□□□□□ -0.46
TPM3-205ENST00000328159 IGHV1-8P0DP01 117 aa12.2□□□□□ -0.46
TPM3-205ENST00000328159 F2RL1P55085 397 aa12.2□□□□□ -0.46
TPM3-205ENST00000328159 RTL8BQ17RB0 113 aa12.2□□□□□ -0.46
TPM3-205ENST00000328159 SPINK9Q5DT21 86 aa12.2□□□□□ -0.46
TPM3-205ENST00000328159 RAB1CQ92928 201 aa12.2□□□□□ -0.46
TPM3-205ENST00000328159 TIMD4Q96H15 378 aa12.2□□□□□ -0.46
TPM3-205ENST00000328159 SLC35D1Q9NTN3 355 aa12.2□□□□□ -0.46
TPM3-205ENST00000328159 MIOXQ9UGB7 285 aa12.2□□□□□ -0.46
TPM3-205ENST00000328159 RELNP78509 3460 aa12.2□□□□□ -0.46
TPM3-205ENST00000328159 TRAV3A0A0B4J244 114 aa12.2□□□□□ -0.46
TPM3-205ENST00000328159 TRIM77I1YAP6 450 aa12.2□□□□□ -0.46
TPM3-205ENST00000328159 J3QR06 171 aa12.2□□□□□ -0.46
TPM3-205ENST00000328159 GPR37O15354 613 aa12.2□□□□□ -0.46
TPM3-205ENST00000328159 C1QL1O75973 258 aa12.2□□□□□ -0.46
TPM3-205ENST00000328159 HRASP01112 189 aa12.2□□□□□ -0.46
TPM3-205ENST00000328159 PRH1P02810 166 aa12.2□□□□□ -0.46
TPM3-205ENST00000328159 SPCS3P61009 180 aa12.2□□□□□ -0.46
TPM3-205ENST00000328159 RUNX1Q01196 453 aa12.2□□□□□ -0.46
TPM3-205ENST00000328159 SLC38A11Q08AI6 406 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms