RNA–Protein interactions for RNA: ENST00000325307.11

HMGB3-201, Transcript of high mobility group box 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGB3, Length 3,560 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-201ENST00000325307 A0A1W2PRV1 198 aa8.23□□□□□ -1.09
HMGB3-201ENST00000325307 GPR31O00270 319 aa8.23□□□□□ -1.09
HMGB3-201ENST00000325307 KCNAB3O43448 404 aa8.23□□□□□ -1.09
HMGB3-201ENST00000325307 SFT2D2O95562 160 aa8.23□□□□□ -1.09
HMGB3-201ENST00000325307 LMO4P61968 165 aa8.23□□□□□ -1.09
HMGB3-201ENST00000325307 REC114Q7Z4M0 266 aa8.23□□□□□ -1.09
HMGB3-201ENST00000325307 SGPP2Q8IWX5 399 aa8.23□□□□□ -1.09
HMGB3-201ENST00000325307 CLUHP3Q96NS8 147 aa8.23□□□□□ -1.09
HMGB3-201ENST00000325307 GPHA2Q96T91 129 aa8.23□□□□□ -1.09
HMGB3-201ENST00000325307 PHB2Q99623 299 aa8.23□□□□□ -1.09
HMGB3-201ENST00000325307 RSRP1Q9BUV0 290 aa8.23□□□□□ -1.09
HMGB3-201ENST00000325307 HECTD1Q9ULT8 2610 aa8.23□□□□□ -1.09
HMGB3-201ENST00000325307 YPEL1O60688 119 aa8.23□□□□□ -1.09
HMGB3-201ENST00000325307 ADAP1O75689 374 aa8.23□□□□□ -1.09
HMGB3-201ENST00000325307 SPP1P10451 314 aa8.23□□□□□ -1.09
HMGB3-201ENST00000325307 ZFP36P26651 326 aaKnown RBP8.23□□□□□ -1.09
HMGB3-201ENST00000325307 ARF6P62330 175 aa8.23□□□□□ -1.09
HMGB3-201ENST00000325307 LRRC37A5PQ49AS3 106 aa8.23□□□□□ -1.09
HMGB3-201ENST00000325307 C11orf87Q6NUJ2 197 aa8.23□□□□□ -1.09
HMGB3-201ENST00000325307 TGIF2LXQ8IUE1 241 aa8.23□□□□□ -1.09
HMGB3-201ENST00000325307 ABHD14BQ96IU4 210 aa8.23□□□□□ -1.09
HMGB3-201ENST00000325307 YPEL2Q96QA6 119 aa8.23□□□□□ -1.09
HMGB3-201ENST00000325307 TNFSF18Q9UNG2 199 aa8.23□□□□□ -1.09
HMGB3-201ENST00000325307 DSCAML1Q8TD84 2053 aa8.23□□□□□ -1.09
HMGB3-201ENST00000325307 ASH1LQ9NR48 2969 aaKnown RBP8.23□□□□□ -1.09
HMGB3-201ENST00000325307 MAP1AP78559 2803 aaPredicted RBP8.23□□□□□ -1.09
HMGB3-201ENST00000325307 GPR12P47775 334 aa8.23□□□□□ -1.09
HMGB3-201ENST00000325307 ODF1Q14990 250 aa8.23□□□□□ -1.09
HMGB3-201ENST00000325307 TMEM30BQ3MIR4 351 aa8.23□□□□□ -1.09
HMGB3-201ENST00000325307 UTF1Q5T230 341 aa8.23□□□□□ -1.09
HMGB3-201ENST00000325307 KCTD9Q7L273 389 aa8.23□□□□□ -1.09
HMGB3-201ENST00000325307 FAM219AQ8IW50 185 aa8.23□□□□□ -1.09
HMGB3-201ENST00000325307 PHYHIPLQ96FC7 376 aa8.23□□□□□ -1.09
HMGB3-201ENST00000325307 ABHD14AQ9BUJ0 271 aa8.23□□□□□ -1.09
HMGB3-201ENST00000325307 TEX46H3BTG2 121 aa8.22□□□□□ -1.09
HMGB3-201ENST00000325307 SLC25A4P12235 298 aa8.22□□□□□ -1.09
HMGB3-201ENST00000325307 NUTF2P61970 127 aaKnown RBP8.22□□□□□ -1.09
HMGB3-201ENST00000325307 UBA52P62987 128 aaKnown RBP8.22□□□□□ -1.09
HMGB3-201ENST00000325307 PRB3Q04118 309 aaPredicted RBP8.22□□□□□ -1.09
HMGB3-201ENST00000325307 Q5PR19 223 aa8.22□□□□□ -1.09
HMGB3-201ENST00000325307 OR52M1Q8NGK5 317 aa8.22□□□□□ -1.09
HMGB3-201ENST00000325307 OR51H1Q8NH63 302 aa8.22□□□□□ -1.09
HMGB3-201ENST00000325307 WFDC12Q8WWY7 111 aa8.22□□□□□ -1.09
HMGB3-201ENST00000325307 ARL6Q9H0F7 186 aa8.22□□□□□ -1.09
HMGB3-201ENST00000325307 LINC00574Q9H8X3 128 aa8.22□□□□□ -1.09
HMGB3-201ENST00000325307 KCNIP3Q9Y2W7 256 aa8.22□□□□□ -1.09
HMGB3-201ENST00000325307 ARHGAP32A7KAX9 2087 aa8.22□□□□□ -1.09
HMGB3-201ENST00000325307 ENSAO43768 121 aaKnown RBP8.22□□□□□ -1.09
HMGB3-201ENST00000325307 FOXH1O75593 365 aa8.22□□□□□ -1.09
HMGB3-201ENST00000325307 IGHV1-8P0DP01 117 aa8.22□□□□□ -1.09
HMGB3-201ENST00000325307 DLX1P56177 255 aa8.22□□□□□ -1.09
HMGB3-201ENST00000325307 SMCO1Q147U7 214 aa8.22□□□□□ -1.09
HMGB3-201ENST00000325307 SVBPQ8N300 66 aa8.22□□□□□ -1.09
HMGB3-201ENST00000325307 OR10A7Q8NGE5 316 aa8.22□□□□□ -1.09
HMGB3-201ENST00000325307 C8orf46Q8TAG6 207 aa8.22□□□□□ -1.09
HMGB3-201ENST00000325307 APCP25054 2843 aa8.22□□□□□ -1.09
HMGB3-201ENST00000325307 TMEM218A2RU14 115 aa8.22□□□□□ -1.09
HMGB3-201ENST00000325307 VWC2LB2RUY7 222 aa8.22□□□□□ -1.09
HMGB3-201ENST00000325307 TXNL1O43396 289 aa8.22□□□□□ -1.09
HMGB3-201ENST00000325307 IFNA2P01563 188 aa8.22□□□□□ -1.09
HMGB3-201ENST00000325307 SLC25A16P16260 332 aa8.22□□□□□ -1.09
HMGB3-201ENST00000325307 RAB7AP51149 207 aa8.22□□□□□ -1.09
HMGB3-201ENST00000325307 DLX6P56179 175 aa8.22□□□□□ -1.09
HMGB3-201ENST00000325307 SP6Q3SY56 376 aa8.22□□□□□ -1.09
HMGB3-201ENST00000325307 BTNL3Q6UXE8 466 aa8.22□□□□□ -1.09
HMGB3-201ENST00000325307 TBC1D26Q86UD7 250 aa8.22□□□□□ -1.09
HMGB3-201ENST00000325307 LYG1Q8N1E2 194 aa8.22□□□□□ -1.09
HMGB3-201ENST00000325307 ZNF645Q8N7E2 425 aa8.22□□□□□ -1.09
HMGB3-201ENST00000325307 MFFQ9GZY8 342 aa8.22□□□□□ -1.09
HMGB3-201ENST00000325307 CRYM-AS1A6NIL9 109 aa8.21□□□□□ -1.09
HMGB3-201ENST00000325307 H0YIZ8 118 aa8.21□□□□□ -1.09
HMGB3-201ENST00000325307 MPPED1O15442 326 aa8.21□□□□□ -1.09
HMGB3-201ENST00000325307 USF1P22415 310 aaPredicted RBP8.21□□□□□ -1.09
HMGB3-201ENST00000325307 COX7A1P24310 79 aa8.21□□□□□ -1.09
HMGB3-201ENST00000325307 ZNF134P52741 427 aa8.21□□□□□ -1.09
HMGB3-201ENST00000325307 HABP2Q14520 560 aaPredicted RBP8.21□□□□□ -1.09
HMGB3-201ENST00000325307 DRAM1Q8N682 238 aa8.21□□□□□ -1.09
HMGB3-201ENST00000325307 LY6G5BQ8NDX9 201 aa8.21□□□□□ -1.09
HMGB3-201ENST00000325307 OR10C1Q96KK4 312 aa8.21□□□□□ -1.09
HMGB3-201ENST00000325307 NAA60Q9H7X0 242 aa8.21□□□□□ -1.09
HMGB3-201ENST00000325307 SIRT7Q9NRC8 400 aa8.21□□□□□ -1.09
HMGB3-201ENST00000325307 WNK2Q9Y3S1 2297 aa8.21□□□□□ -1.09
HMGB3-201ENST00000325307 KIAA1324LA8MWY0 1029 aaPredicted RBP8.21□□□□□ -1.1
HMGB3-201ENST00000325307 RBX1P62877 108 aa8.21□□□□□ -1.1
HMGB3-201ENST00000325307 ZNF345Q14585 488 aa8.21□□□□□ -1.1
HMGB3-201ENST00000325307 RNF212Q495C1 297 aa8.21□□□□□ -1.1
HMGB3-201ENST00000325307 CT45A1Q5HYN5 189 aa8.21□□□□□ -1.1
HMGB3-201ENST00000325307 ZNF546Q86UE3 836 aa8.21□□□□□ -1.1
HMGB3-201ENST00000325307 OR10X1Q8NGY0 326 aa8.21□□□□□ -1.1
HMGB3-201ENST00000325307 CT45A3Q8NHU0 189 aa8.21□□□□□ -1.1
HMGB3-201ENST00000325307 TOLLIPQ9H0E2 274 aa8.21□□□□□ -1.1
HMGB3-201ENST00000325307 ZNRD1Q9P1U0 126 aa8.21□□□□□ -1.1
HMGB3-201ENST00000325307 C17orf98A8MV24 154 aa8.21□□□□□ -1.1
HMGB3-201ENST00000325307 FAM157AC9JC47 383 aa8.21□□□□□ -1.1
HMGB3-201ENST00000325307 ITGB1BP1O14713 200 aa8.21□□□□□ -1.1
HMGB3-201ENST00000325307 FGF16O43320 207 aa8.21□□□□□ -1.1
HMGB3-201ENST00000325307 PGLYRP1O75594 196 aaPredicted RBP8.21□□□□□ -1.1
HMGB3-201ENST00000325307 IL15RAQ13261 267 aa8.21□□□□□ -1.1
HMGB3-201ENST00000325307 LRRC75A-AS1Q8N1F1 130 aa8.21□□□□□ -1.1
HMGB3-201ENST00000325307 ABHD12Q8N2K0 398 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms