RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 PIEZO2Q9H5I5 2752 aa10.82□□□□□ -0.68
HMGCS1-201ENST00000325110 ACTL6BO94805 426 aa10.81□□□□□ -0.68
HMGCS1-201ENST00000325110 KBTBD11O94819 623 aa10.81□□□□□ -0.68
HMGCS1-201ENST00000325110 NDUFB4O95168 129 aa10.81□□□□□ -0.68
HMGCS1-201ENST00000325110 IGLV2-14P01704 120 aa10.81□□□□□ -0.68
HMGCS1-201ENST00000325110 SRSF7Q16629 238 aaKnown RBP eCLIP10.81□□□□□ -0.688e-8■□□□□ 10.4
HMGCS1-201ENST00000325110 ACOT6Q3I5F7 207 aaPredicted RBP10.81□□□□□ -0.68
HMGCS1-201ENST00000325110 GTF3AQ92664 365 aaKnown RBP10.81□□□□□ -0.68
HMGCS1-201ENST00000325110 QTRT1Q9BXR0 403 aaKnown RBP10.81□□□□□ -0.68
HMGCS1-201ENST00000325110 LOC400499M0QZD8 3231 aa10.81□□□□□ -0.68
HMGCS1-201ENST00000325110 A0A1W2PNU3 283 aaPredicted RBP10.81□□□□□ -0.68
HMGCS1-201ENST00000325110 C21orf140B9A014 251 aa10.81□□□□□ -0.68
HMGCS1-201ENST00000325110 SCGB1D1O95968 90 aa10.81□□□□□ -0.68
HMGCS1-201ENST00000325110 SMIM21Q3B7S5 101 aa10.81□□□□□ -0.68
HMGCS1-201ENST00000325110 OR2T10Q8NGZ9 312 aa10.81□□□□□ -0.68
HMGCS1-201ENST00000325110 MBD3L1Q8WWY6 194 aa10.81□□□□□ -0.68
HMGCS1-201ENST00000325110 ELOA3CA0A087WX78 387 aaPredicted RBP10.81□□□□□ -0.68
HMGCS1-201ENST00000325110 NKX2-8O15522 239 aa10.81□□□□□ -0.68
HMGCS1-201ENST00000325110 GALR2O43603 387 aaPredicted RBP10.81□□□□□ -0.68
HMGCS1-201ENST00000325110 WISP2O76076 250 aa10.81□□□□□ -0.68
HMGCS1-201ENST00000325110 LMO1P25800 156 aa10.81□□□□□ -0.68
HMGCS1-201ENST00000325110 ATP5G3P48201 142 aa10.81□□□□□ -0.68
HMGCS1-201ENST00000325110 SRSF6Q13247 344 aaKnown RBP10.81□□□□□ -0.68
HMGCS1-201ENST00000325110 KCNIP4Q6PIL6 250 aa10.81□□□□□ -0.68
HMGCS1-201ENST00000325110 LINC00469Q8N7U9 141 aa10.81□□□□□ -0.68
HMGCS1-201ENST00000325110 DDA1Q9BW61 102 aa10.81□□□□□ -0.68
HMGCS1-201ENST00000325110 NPCDR1Q9BY65 106 aa10.81□□□□□ -0.68
HMGCS1-201ENST00000325110 PITPNC1Q9UKF7 332 aa10.81□□□□□ -0.68
HMGCS1-201ENST00000325110 BOD1L1Q8NFC6 3051 aa10.81□□□□□ -0.68
HMGCS1-201ENST00000325110 ARFGEF3Q5TH69 2177 aa10.81□□□□□ -0.68
HMGCS1-201ENST00000325110 SPRY3O43610 288 aa10.8□□□□□ -0.68
HMGCS1-201ENST00000325110 SPINK4O60575 86 aa10.8□□□□□ -0.68
HMGCS1-201ENST00000325110 MBP02144 154 aa10.8□□□□□ -0.68
HMGCS1-201ENST00000325110 ABHD12Q8N2K0 398 aa10.8□□□□□ -0.68
HMGCS1-201ENST00000325110 CIB3Q96Q77 187 aaPredicted RBP10.8□□□□□ -0.68
HMGCS1-201ENST00000325110 P2RX4Q99571 388 aa10.8□□□□□ -0.68
HMGCS1-201ENST00000325110 HIST1H2BLQ99880 126 aa10.8□□□□□ -0.68
HMGCS1-201ENST00000325110 GCM1Q9NP62 436 aa10.8□□□□□ -0.68
HMGCS1-201ENST00000325110 ENY2Q9NPA8 101 aa10.8□□□□□ -0.68
HMGCS1-201ENST00000325110 TNCP24821 2201 aa10.8□□□□□ -0.68
HMGCS1-201ENST00000325110 TRAV1-1A0A0B4J248 108 aa10.8□□□□□ -0.68
HMGCS1-201ENST00000325110 ZNF729A6NN14 1252 aaPredicted RBP10.8□□□□□ -0.68
HMGCS1-201ENST00000325110 LINC00473A8K010 186 aa10.8□□□□□ -0.68
HMGCS1-201ENST00000325110 ZNF705FA8MVS1 300 aaPredicted RBP10.8□□□□□ -0.68
HMGCS1-201ENST00000325110 ZNF705DP0CH99 300 aaPredicted RBP10.8□□□□□ -0.68
HMGCS1-201ENST00000325110 ZNF705BP0CI00 300 aaPredicted RBP10.8□□□□□ -0.68
HMGCS1-201ENST00000325110 THBS3P49746 956 aa10.8□□□□□ -0.68
HMGCS1-201ENST00000325110 ZNF83P51522 516 aa10.8□□□□□ -0.68
HMGCS1-201ENST00000325110 ZNF718Q3SXZ3 478 aa10.8□□□□□ -0.68
HMGCS1-201ENST00000325110 RPL39P5Q59GN2 51 aa10.8□□□□□ -0.68
HMGCS1-201ENST00000325110 FAM201AQ5SY85 155 aa10.8□□□□□ -0.68
HMGCS1-201ENST00000325110 CYP2G1PQ6ZSU1 146 aa10.8□□□□□ -0.68
HMGCS1-201ENST00000325110 TAAR6Q96RI8 345 aa10.8□□□□□ -0.68
HMGCS1-201ENST00000325110 DERL1Q9BUN8 251 aa10.8□□□□□ -0.68
HMGCS1-201ENST00000325110 HIPK2Q9H2X6 1198 aa10.8□□□□□ -0.68
HMGCS1-201ENST00000325110 MDFIC2A0A1B0GVS7 189 aa10.8□□□□□ -0.68
HMGCS1-201ENST00000325110 HOXA6P31267 233 aa10.8□□□□□ -0.68
HMGCS1-201ENST00000325110 MIC13Q5XKP0 118 aa10.8□□□□□ -0.68
HMGCS1-201ENST00000325110 MLNRO43193 412 aa10.79□□□□□ -0.68
HMGCS1-201ENST00000325110 ZNRF1Q8ND25 227 aa10.79□□□□□ -0.68
HMGCS1-201ENST00000325110 CTDSP1Q9GZU7 261 aa10.79□□□□□ -0.68
HMGCS1-201ENST00000325110 TP53TG5Q9Y2B4 290 aa10.79□□□□□ -0.68
HMGCS1-201ENST00000325110 TRBV6-6A0A0A6YYG2 114 aa10.79□□□□□ -0.68
HMGCS1-201ENST00000325110 A0A1B0GV90 55 aa10.79□□□□□ -0.68
HMGCS1-201ENST00000325110 CD1BP29016 333 aa10.79□□□□□ -0.68
HMGCS1-201ENST00000325110 GNG10P50151 68 aa10.79□□□□□ -0.68
HMGCS1-201ENST00000325110 TMEM14EPQ6UXP3 125 aa10.79□□□□□ -0.68
HMGCS1-201ENST00000325110 FAM214BQ7L5A3 538 aa10.79□□□□□ -0.68
HMGCS1-201ENST00000325110 GMPPAQ96IJ6 420 aaPredicted RBP10.79□□□□□ -0.68
HMGCS1-201ENST00000325110 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.79□□□□□ -0.68
HMGCS1-201ENST00000325110 OR1P1Q8NH06 330 aa10.79□□□□□ -0.68
HMGCS1-201ENST00000325110 COQ2Q96H96 371 aa10.79□□□□□ -0.68
HMGCS1-201ENST00000325110 YPEL4Q96NS1 127 aa10.79□□□□□ -0.68
HMGCS1-201ENST00000325110 CXXC4Q9H2H0 198 aa10.79□□□□□ -0.68
HMGCS1-201ENST00000325110 HSPB7Q9UBY9 170 aa10.79□□□□□ -0.68
HMGCS1-201ENST00000325110 HIST1H1BP16401 226 aaKnown RBP10.78□□□□□ -0.68
HMGCS1-201ENST00000325110 ZNF146Q15072 292 aa10.78□□□□□ -0.68
HMGCS1-201ENST00000325110 S1PR3Q99500 378 aa10.78□□□□□ -0.68
HMGCS1-201ENST00000325110 ASPMQ8IZT6 3477 aa10.78□□□□□ -0.68
HMGCS1-201ENST00000325110 ZFHX2Q9C0A1 2572 aaPredicted RBP10.78□□□□□ -0.68
HMGCS1-201ENST00000325110 M0R1B8 84 aa10.78□□□□□ -0.68
HMGCS1-201ENST00000325110 HRASP01112 189 aa10.78□□□□□ -0.68
HMGCS1-201ENST00000325110 RAB4BP61018 213 aa10.78□□□□□ -0.68
HMGCS1-201ENST00000325110 ATP6V1FQ16864 119 aa10.78□□□□□ -0.68
HMGCS1-201ENST00000325110 OPN3Q9H1Y3 402 aaPredicted RBP10.78□□□□□ -0.68
HMGCS1-201ENST00000325110 FAM90A26D6RGX4 464 aa10.78□□□□□ -0.68
HMGCS1-201ENST00000325110 DVL1O14640 695 aa10.78□□□□□ -0.68
HMGCS1-201ENST00000325110 CLDN14O95500 239 aa10.78□□□□□ -0.68
HMGCS1-201ENST00000325110 OR9G9P0C7N8 305 aa10.78□□□□□ -0.68
HMGCS1-201ENST00000325110 C1QTNF9P0C862 333 aa10.78□□□□□ -0.68
HMGCS1-201ENST00000325110 GZMHP20718 246 aa10.78□□□□□ -0.68
HMGCS1-201ENST00000325110 KITLGP21583 273 aa10.78□□□□□ -0.68
HMGCS1-201ENST00000325110 DDTP30046 118 aa10.78□□□□□ -0.68
HMGCS1-201ENST00000325110 PRDX2P32119 198 aa10.78□□□□□ -0.68
HMGCS1-201ENST00000325110 PRSS8Q16651 343 aa10.78□□□□□ -0.68
HMGCS1-201ENST00000325110 ACP7Q6ZNF0 438 aa10.78□□□□□ -0.68
HMGCS1-201ENST00000325110 Q6ZR03 302 aa10.78□□□□□ -0.68
HMGCS1-201ENST00000325110 SRD5A3Q9H8P0 318 aa10.78□□□□□ -0.68
HMGCS1-201ENST00000325110 TRAPPC1Q9Y5R8 145 aa10.78□□□□□ -0.68
HMGCS1-201ENST00000325110 F6UZH7 168 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms