RNA–Protein interactions for RNA: ENST00000321027.7

GCFC2-201, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCFC2, Length 4,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-201ENST00000321027 RNF2Q99496 336 aa13.15□□□□□ -0.3
GCFC2-201ENST00000321027 TMUB1Q9BVT8 246 aa13.15□□□□□ -0.3
GCFC2-201ENST00000321027 PRDM14Q9GZV8 571 aa13.15□□□□□ -0.3
GCFC2-201ENST00000321027 CBY1Q9Y3M2 126 aa13.15□□□□□ -0.3
GCFC2-201ENST00000321027 TANC1Q9C0D5 1861 aa13.15□□□□□ -0.31
GCFC2-201ENST00000321027 HOXA6P31267 233 aa13.14□□□□□ -0.31
GCFC2-201ENST00000321027 STARD4Q96DR4 205 aa13.14□□□□□ -0.31
GCFC2-201ENST00000321027 PRNDQ9UKY0 176 aa13.14□□□□□ -0.31
GCFC2-201ENST00000321027 UFC1Q9Y3C8 167 aa13.14□□□□□ -0.31
GCFC2-201ENST00000321027 CLDN16Q9Y5I7 305 aa13.14□□□□□ -0.31
GCFC2-201ENST00000321027 TMSB15BA0A087X1C1 80 aa13.14□□□□□ -0.31
GCFC2-201ENST00000321027 PROB1E7EW31 1015 aa13.14□□□□□ -0.31
GCFC2-201ENST00000321027 NDUFB4O95168 129 aa13.14□□□□□ -0.31
GCFC2-201ENST00000321027 RBKSQ9H477 322 aa13.14□□□□□ -0.31
GCFC2-201ENST00000321027 RNF24Q9Y225 148 aa13.14□□□□□ -0.31
GCFC2-201ENST00000321027 HEATR1Q9H583 2144 aaKnown RBP13.14□□□□□ -0.31
GCFC2-201ENST00000321027 J3KRW8 73 aa13.14□□□□□ -0.31
GCFC2-201ENST00000321027 SRSF10O75494 262 aaKnown RBP13.14□□□□□ -0.31
GCFC2-201ENST00000321027 ACAA1P09110 424 aaPredicted RBP13.14□□□□□ -0.31
GCFC2-201ENST00000321027 CD40P25942 277 aa13.14□□□□□ -0.31
GCFC2-201ENST00000321027 PRDX2P32119 198 aa13.14□□□□□ -0.31
GCFC2-201ENST00000321027 ELOBQ15370 118 aa13.14□□□□□ -0.31
GCFC2-201ENST00000321027 FAM89BQ8N5H3 189 aa13.14□□□□□ -0.31
GCFC2-201ENST00000321027 OR1L6Q8NGR2 347 aa13.14□□□□□ -0.31
GCFC2-201ENST00000321027 OR51M1Q9H341 326 aa13.14□□□□□ -0.31
GCFC2-201ENST00000321027 FAM90A10PA6NDY2 464 aa13.14□□□□□ -0.31
GCFC2-201ENST00000321027 FAM90A18PA6NE21 464 aa13.14□□□□□ -0.31
GCFC2-201ENST00000321027 FAM90A16PA6NEW6 464 aa13.14□□□□□ -0.31
GCFC2-201ENST00000321027 FAM90A20PA6NIJ5 464 aa13.14□□□□□ -0.31
GCFC2-201ENST00000321027 FAM90A8PA6NJQ4 464 aa13.14□□□□□ -0.31
GCFC2-201ENST00000321027 FAM90A7PA6NKC0 464 aa13.14□□□□□ -0.31
GCFC2-201ENST00000321027 FAM90A22PA8MWA6 464 aa13.14□□□□□ -0.31
GCFC2-201ENST00000321027 FAM90A12PA8MX19 464 aa13.14□□□□□ -0.31
GCFC2-201ENST00000321027 FAM90A5PA8MXJ8 464 aa13.14□□□□□ -0.31
GCFC2-201ENST00000321027 FAM90A23PA8MXZ1 464 aa13.14□□□□□ -0.31
GCFC2-201ENST00000321027 P01737 135 aa13.14□□□□□ -0.31
GCFC2-201ENST00000321027 FAM90A15PP0C7V4 464 aa13.14□□□□□ -0.31
GCFC2-201ENST00000321027 FAM90A13PP0C7W8 464 aa13.14□□□□□ -0.31
GCFC2-201ENST00000321027 FAM90A14PP0C7W9 464 aa13.14□□□□□ -0.31
GCFC2-201ENST00000321027 FAM90A24PP0C7X0 464 aa13.14□□□□□ -0.31
GCFC2-201ENST00000321027 ZNF883P0CG24 379 aa13.14□□□□□ -0.31
GCFC2-201ENST00000321027 CD1BP29016 333 aa13.14□□□□□ -0.31
GCFC2-201ENST00000321027 ZBTB34Q8NCN2 500 aa13.14□□□□□ -0.31
GCFC2-201ENST00000321027 BET1LQ9NYM9 111 aa13.14□□□□□ -0.31
GCFC2-201ENST00000321027 EGR1P18146 543 aa13.13□□□□□ -0.31
GCFC2-201ENST00000321027 ZNF137PP52743 207 aa13.13□□□□□ -0.31
GCFC2-201ENST00000321027 FAM214BQ7L5A3 538 aa13.13□□□□□ -0.31
GCFC2-201ENST00000321027 LINC00596Q86U02 117 aa13.13□□□□□ -0.31
GCFC2-201ENST00000321027 VN1R17PQ8TDU5 208 aa13.13□□□□□ -0.31
GCFC2-201ENST00000321027 FAM222BQ8WU58 562 aa13.13□□□□□ -0.31
GCFC2-201ENST00000321027 MARS2Q96GW9 593 aaKnown RBP13.13□□□□□ -0.31
GCFC2-201ENST00000321027 FAM117AQ9C073 453 aa13.13□□□□□ -0.31
GCFC2-201ENST00000321027 UCP2P55851 309 aa13.13□□□□□ -0.31
GCFC2-201ENST00000321027 COL10A1Q03692 680 aa13.13□□□□□ -0.31
GCFC2-201ENST00000321027 OR1L8Q8NGR8 309 aa13.13□□□□□ -0.31
GCFC2-201ENST00000321027 RAB24Q969Q5 203 aa13.13□□□□□ -0.31
GCFC2-201ENST00000321027 RHBDL1O75783 438 aa13.13□□□□□ -0.31
GCFC2-201ENST00000321027 SCGB1C2P0DMR2 95 aa13.13□□□□□ -0.31
GCFC2-201ENST00000321027 MFAP2P55001 183 aa13.13□□□□□ -0.31
GCFC2-201ENST00000321027 RTP5Q14D33 572 aa13.13□□□□□ -0.31
GCFC2-201ENST00000321027 TRGC1P0CF51 173 aa13.12□□□□□ -0.31
GCFC2-201ENST00000321027 FADS6Q8N9I5 356 aa13.12□□□□□ -0.31
GCFC2-201ENST00000321027 ZG16O60844 167 aa13.12□□□□□ -0.31
GCFC2-201ENST00000321027 CYTL1Q9NRR1 136 aa13.12□□□□□ -0.31
GCFC2-201ENST00000321027 WIPI2Q9Y4P8 454 aa13.12□□□□□ -0.31
GCFC2-201ENST00000321027 ZFHX2Q9C0A1 2572 aaPredicted RBP13.12□□□□□ -0.31
GCFC2-201ENST00000321027 PDE6DO43924 150 aa13.12□□□□□ -0.31
GCFC2-201ENST00000321027 KLF7O75840 302 aaPredicted RBP13.12□□□□□ -0.31
GCFC2-201ENST00000321027 SLC25A53Q5H9E4 307 aa13.12□□□□□ -0.31
GCFC2-201ENST00000321027 GUCD1Q96NT3 240 aa13.12□□□□□ -0.31
GCFC2-201ENST00000321027 PQLC2LA1A4F0 135 aa13.12□□□□□ -0.31
GCFC2-201ENST00000321027 CXorf1O96002 111 aa13.12□□□□□ -0.31
GCFC2-201ENST00000321027 ORM1P02763 201 aa13.12□□□□□ -0.31
GCFC2-201ENST00000321027 ZFP36L1Q07352 338 aaKnown RBP13.12□□□□□ -0.31
GCFC2-201ENST00000321027 FAM216AQ8WUB2 273 aa13.12□□□□□ -0.31
GCFC2-201ENST00000321027 WFIKKN1Q96NZ8 548 aa13.12□□□□□ -0.31
GCFC2-201ENST00000321027 TMEM191AQ9H0A3 160 aa13.12□□□□□ -0.31
GCFC2-201ENST00000321027 TMEM140Q9NV12 185 aa13.12□□□□□ -0.31
GCFC2-201ENST00000321027 PLXNA4Q9HCM2 1894 aa13.11□□□□□ -0.31
GCFC2-201ENST00000321027 CDX1P47902 265 aaPredicted RBP13.11□□□□□ -0.31
GCFC2-201ENST00000321027 C19orf35Q6ZS72 473 aa13.11□□□□□ -0.31
GCFC2-201ENST00000321027 DRAM1Q8N682 238 aa13.11□□□□□ -0.31
GCFC2-201ENST00000321027 LILRB1Q8NHL6 650 aaPredicted RBP13.11□□□□□ -0.31
GCFC2-201ENST00000321027 RASL11BQ9BPW5 248 aa13.11□□□□□ -0.31
GCFC2-201ENST00000321027 RAB1BQ9H0U4 201 aa13.11□□□□□ -0.31
GCFC2-201ENST00000321027 COA4Q9NYJ1 87 aa13.11□□□□□ -0.31
GCFC2-201ENST00000321027 PLCE1Q9P212 2302 aa13.11□□□□□ -0.31
GCFC2-201ENST00000321027 IGHV3-72A0A0B4J1Y9 119 aa13.11□□□□□ -0.31
GCFC2-201ENST00000321027 IGKV1D-13A0A0B4J2D9 117 aa13.11□□□□□ -0.31
GCFC2-201ENST00000321027 PLAUP00749 431 aa13.11□□□□□ -0.31
GCFC2-201ENST00000321027 IGKV1-13P0DP09 117 aa13.11□□□□□ -0.31
GCFC2-201ENST00000321027 MMDQ15546 238 aa13.11□□□□□ -0.31
GCFC2-201ENST00000321027 C10orf113Q5VZT2 155 aa13.11□□□□□ -0.31
GCFC2-201ENST00000321027 RCC1LQ96I51 464 aaKnown RBP13.11□□□□□ -0.31
GCFC2-201ENST00000321027 CCL13Q99616 98 aa13.11□□□□□ -0.31
GCFC2-201ENST00000321027 ASCL3Q9NQ33 180 aa13.11□□□□□ -0.31
GCFC2-201ENST00000321027 USF3Q68DE3 2245 aa13.11□□□□□ -0.31
GCFC2-201ENST00000321027 LOC102723996A0A087X1L8 192 aa13.11□□□□□ -0.31
GCFC2-201ENST00000321027 TNFRSF9Q07011 255 aa13.11□□□□□ -0.31
GCFC2-201ENST00000321027 GGACTQ9BVM4 153 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms