RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 ERVK-16P61578 105 aa14.59□□□□□ -0.07
RAB39A-201ENST00000320578 NHLH2Q02577 135 aa14.59□□□□□ -0.07
RAB39A-201ENST00000320578 AVPI1Q5T686 147 aa14.59□□□□□ -0.07
RAB39A-201ENST00000320578 ZNF843Q8N446 348 aa14.59□□□□□ -0.07
RAB39A-201ENST00000320578 ZNF383Q8NA42 475 aa14.59□□□□□ -0.07
RAB39A-201ENST00000320578 RNF141Q8WVD5 230 aa14.59□□□□□ -0.07
RAB39A-201ENST00000320578 CACNA1BQ00975 2339 aa14.59□□□□□ -0.07
RAB39A-201ENST00000320578 OVOL3O00110 214 aa14.59□□□□□ -0.07
RAB39A-201ENST00000320578 CT45A6P0DMU7 189 aa14.59□□□□□ -0.07
RAB39A-201ENST00000320578 CT45A5P0DMU8 189 aa14.59□□□□□ -0.07
RAB39A-201ENST00000320578 CT45A7P0DMV0 189 aa14.59□□□□□ -0.07
RAB39A-201ENST00000320578 TLE4Q04727 773 aa14.59□□□□□ -0.07
RAB39A-201ENST00000320578 ZNF266Q14584 549 aa14.59□□□□□ -0.07
RAB39A-201ENST00000320578 PDLIM3Q53GG5 364 aaPredicted RBP14.59□□□□□ -0.07
RAB39A-201ENST00000320578 STPG2Q8N412 459 aa14.59□□□□□ -0.07
RAB39A-201ENST00000320578 OR52E5Q8NH55 327 aa14.59□□□□□ -0.07
RAB39A-201ENST00000320578 BSCL2Q96G97 398 aaPredicted RBP14.59□□□□□ -0.07
RAB39A-201ENST00000320578 AIFM2Q9BRQ8 373 aa14.59□□□□□ -0.07
RAB39A-201ENST00000320578 GINS3Q9BRX5 216 aa14.59□□□□□ -0.07
RAB39A-201ENST00000320578 TMEM133Q9H2Q1 129 aa14.59□□□□□ -0.07
RAB39A-201ENST00000320578 WFDC1Q9HC57 220 aa14.59□□□□□ -0.07
RAB39A-201ENST00000320578 SULT1A1P50225 295 aa14.58□□□□□ -0.08
RAB39A-201ENST00000320578 STX12Q86Y82 276 aa14.58□□□□□ -0.08
RAB39A-201ENST00000320578 CIB3Q96Q77 187 aaPredicted RBP14.58□□□□□ -0.08
RAB39A-201ENST00000320578 PPIAL4CA0A0B4J2A2 164 aa14.57□□□□□ -0.08
RAB39A-201ENST00000320578 hCG_1809904A0A1W2PP81 198 aa14.57□□□□□ -0.08
RAB39A-201ENST00000320578 A0A1W2PPE2 198 aa14.57□□□□□ -0.08
RAB39A-201ENST00000320578 A0A1W2PR64 198 aa14.57□□□□□ -0.08
RAB39A-201ENST00000320578 A0A1W2PRV1 198 aa14.57□□□□□ -0.08
RAB39A-201ENST00000320578 HRASP01112 189 aa14.57□□□□□ -0.08
RAB39A-201ENST00000320578 SEC11BP0C7V7 166 aa14.57□□□□□ -0.08
RAB39A-201ENST00000320578 PPIAL4GP0DN37 164 aa14.57□□□□□ -0.08
RAB39A-201ENST00000320578 RTL8BQ17RB0 113 aa14.57□□□□□ -0.08
RAB39A-201ENST00000320578 IGFBPL1Q8WX77 278 aa14.57□□□□□ -0.08
RAB39A-201ENST00000320578 ST6GALNAC6Q969X2 333 aa14.57□□□□□ -0.08
RAB39A-201ENST00000320578 SMIM3Q9BZL3 60 aa14.57□□□□□ -0.08
RAB39A-201ENST00000320578 PSENENQ9NZ42 101 aa14.57□□□□□ -0.08
RAB39A-201ENST00000320578 RELNP78509 3460 aa14.57□□□□□ -0.08
RAB39A-201ENST00000320578 CFAP46Q8IYW2 2715 aa14.57□□□□□ -0.08
RAB39A-201ENST00000320578 LY6HO94772 140 aa14.57□□□□□ -0.08
RAB39A-201ENST00000320578 FAM157CP0CG43 387 aa14.57□□□□□ -0.08
RAB39A-201ENST00000320578 IL3RAP26951 378 aa14.57□□□□□ -0.08
RAB39A-201ENST00000320578 ERVFRD-1P60508 538 aa14.57□□□□□ -0.08
RAB39A-201ENST00000320578 ZNF429Q86V71 674 aa14.57□□□□□ -0.08
RAB39A-201ENST00000320578 COMMD7Q86VX2 200 aa14.57□□□□□ -0.08
RAB39A-201ENST00000320578 ABHD12Q8N2K0 398 aa14.57□□□□□ -0.08
RAB39A-201ENST00000320578 SAT2Q96F10 170 aaPredicted RBP14.57□□□□□ -0.08
RAB39A-201ENST00000320578 PCGF1Q9BSM1 259 aa14.57□□□□□ -0.08
RAB39A-201ENST00000320578 RBKSQ9H477 322 aa14.57□□□□□ -0.08
RAB39A-201ENST00000320578 DFFBO76075 338 aa14.56□□□□□ -0.08
RAB39A-201ENST00000320578 SCAF4O95104 1147 aaKnown RBP14.56□□□□□ -0.08
RAB39A-201ENST00000320578 NXPH3O95157 252 aa14.56□□□□□ -0.08
RAB39A-201ENST00000320578 LIPFP07098 398 aa14.56□□□□□ -0.08
RAB39A-201ENST00000320578 GPR6P46095 362 aaPredicted RBP14.56□□□□□ -0.08
RAB39A-201ENST00000320578 FAM74A1Q5RGS3 127 aa14.56□□□□□ -0.08
RAB39A-201ENST00000320578 OR5AN1Q8NGI8 311 aa14.56□□□□□ -0.08
RAB39A-201ENST00000320578 OR10X1Q8NGY0 326 aa14.56□□□□□ -0.08
RAB39A-201ENST00000320578 PCNPQ8WW12 178 aaKnown RBP14.56□□□□□ -0.08
RAB39A-201ENST00000320578 TMED6Q8WW62 240 aa14.56□□□□□ -0.08
RAB39A-201ENST00000320578 PFDN2Q9UHV9 154 aa14.56□□□□□ -0.08
RAB39A-201ENST00000320578 IL6RP08887 468 aaPredicted RBP14.55□□□□□ -0.08
RAB39A-201ENST00000320578 CDKN1AP38936 164 aa14.55□□□□□ -0.08
RAB39A-201ENST00000320578 PRRX1P54821 245 aa14.55□□□□□ -0.08
RAB39A-201ENST00000320578 BEND2Q8NDZ0 799 aa14.55□□□□□ -0.08
RAB39A-201ENST00000320578 OR1S2Q8NGQ3 325 aa14.55□□□□□ -0.08
RAB39A-201ENST00000320578 BARX1Q9HBU1 254 aaPredicted RBP14.55□□□□□ -0.08
RAB39A-201ENST00000320578 SLC35D1Q9NTN3 355 aa14.55□□□□□ -0.08
RAB39A-201ENST00000320578 ANKRD34BA5PLL1 514 aa14.55□□□□□ -0.08
RAB39A-201ENST00000320578 CRYZL1O95825 349 aa14.55□□□□□ -0.08
RAB39A-201ENST00000320578 APOA2P02652 100 aa14.55□□□□□ -0.08
RAB39A-201ENST00000320578 OR9G9P0C7N8 305 aa14.55□□□□□ -0.08
RAB39A-201ENST00000320578 SPP1P10451 314 aa14.55□□□□□ -0.08
RAB39A-201ENST00000320578 SULT1A2P50226 295 aa14.55□□□□□ -0.08
RAB39A-201ENST00000320578 DYNLT3P51808 116 aa14.55□□□□□ -0.08
RAB39A-201ENST00000320578 SPCS3P61009 180 aa14.55□□□□□ -0.08
RAB39A-201ENST00000320578 GNB2P62879 340 aa14.55□□□□□ -0.08
RAB39A-201ENST00000320578 RELBQ01201 579 aa14.55□□□□□ -0.08
RAB39A-201ENST00000320578 CLEC9AQ6UXN8 241 aa14.55□□□□□ -0.08
RAB39A-201ENST00000320578 TMEM14EPQ6UXP3 125 aa14.55□□□□□ -0.08
RAB39A-201ENST00000320578 EIF4E3Q8N5X7 224 aaKnown RBP14.55□□□□□ -0.08
RAB39A-201ENST00000320578 OR5C1Q8NGR4 320 aa14.55□□□□□ -0.08
RAB39A-201ENST00000320578 OR4A16Q8NH70 328 aa14.55□□□□□ -0.08
RAB39A-201ENST00000320578 OSR1Q8TAX0 266 aaPredicted RBP14.55□□□□□ -0.08
RAB39A-201ENST00000320578 MARVELD3Q96A59 401 aa14.55□□□□□ -0.08
RAB39A-201ENST00000320578 TMEM140Q9NV12 185 aa14.55□□□□□ -0.08
RAB39A-201ENST00000320578 M0R1W7 72 aa14.54□□□□□ -0.08
RAB39A-201ENST00000320578 C1QL1O75973 258 aa14.54□□□□□ -0.08
RAB39A-201ENST00000320578 PRB1P04280 392 aa14.54□□□□□ -0.08
RAB39A-201ENST00000320578 RHOVQ96L33 236 aa14.54□□□□□ -0.08
RAB39A-201ENST00000320578 CXorf58Q96LI9 332 aa14.54□□□□□ -0.08
RAB39A-201ENST00000320578 ATP5SQ99766 215 aa14.54□□□□□ -0.08
RAB39A-201ENST00000320578 SSBP3Q9BWW4 388 aaPredicted RBP14.54□□□□□ -0.08
RAB39A-201ENST00000320578 H0YJW9 148 aa14.53□□□□□ -0.08
RAB39A-201ENST00000320578 CST7O76096 145 aa14.53□□□□□ -0.08
RAB39A-201ENST00000320578 IGLV1-47P01700 117 aa14.53□□□□□ -0.08
RAB39A-201ENST00000320578 IAPPP10997 89 aa14.53□□□□□ -0.08
RAB39A-201ENST00000320578 RAB5CP51148 216 aa14.53□□□□□ -0.08
RAB39A-201ENST00000320578 HBG1P69891 147 aa14.53□□□□□ -0.08
RAB39A-201ENST00000320578 HBG2P69892 147 aa14.53□□□□□ -0.08
RAB39A-201ENST00000320578 TMEM177Q53S58 311 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms