RNA–Protein interactions for RNA: ENST00000319172.9

TMEM39A-201, Transcript of transmembrane protein 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39A, Length 4,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-201ENST00000319172 DUXBA0A1W2PPF3 345 aa7.8□□□□□ -1.16
TMEM39A-201ENST00000319172 MARCH11A6NNE9 402 aa7.8□□□□□ -1.16
TMEM39A-201ENST00000319172 F6UZH7 168 aa7.8□□□□□ -1.16
TMEM39A-201ENST00000319172 RNASEK-C17orf49H0YIS7 233 aa7.8□□□□□ -1.16
TMEM39A-201ENST00000319172 ATP6V0CP27449 155 aa7.8□□□□□ -1.16
TMEM39A-201ENST00000319172 NPBWR1P48145 328 aa7.8□□□□□ -1.16
TMEM39A-201ENST00000319172 ZNF66Q6ZN08 573 aa7.8□□□□□ -1.16
TMEM39A-201ENST00000319172 SSMEM1Q8WWF3 244 aa7.8□□□□□ -1.16
TMEM39A-201ENST00000319172 ATP5SQ99766 215 aa7.8□□□□□ -1.16
TMEM39A-201ENST00000319172 MMP24Q9Y5R2 645 aa7.8□□□□□ -1.16
TMEM39A-201ENST00000319172 TRBV6-7A0A0A0MS04 114 aa7.8□□□□□ -1.16
TMEM39A-201ENST00000319172 PPIAL4CA0A0B4J2A2 164 aa7.8□□□□□ -1.16
TMEM39A-201ENST00000319172 PPIAL4GP0DN37 164 aa7.8□□□□□ -1.16
TMEM39A-201ENST00000319172 DAOP14920 347 aa7.8□□□□□ -1.16
TMEM39A-201ENST00000319172 TAGLN2P37802 199 aaKnown RBP7.8□□□□□ -1.16
TMEM39A-201ENST00000319172 BPIFCQ8NFQ6 507 aa7.8□□□□□ -1.16
TMEM39A-201ENST00000319172 GALNT14Q96FL9 552 aa7.8□□□□□ -1.16
TMEM39A-201ENST00000319172 LURAP1Q96LR2 239 aa7.8□□□□□ -1.16
TMEM39A-201ENST00000319172 RSRP1Q9BUV0 290 aa7.8□□□□□ -1.16
TMEM39A-201ENST00000319172 HES4Q9HCC6 221 aa7.8□□□□□ -1.16
TMEM39A-201ENST00000319172 J3QR06 171 aa7.8□□□□□ -1.16
TMEM39A-201ENST00000319172 HKR1P10072 659 aa7.8□□□□□ -1.16
TMEM39A-201ENST00000319172 EGR1P18146 543 aa7.8□□□□□ -1.16
TMEM39A-201ENST00000319172 HTD2P86397 168 aa7.8□□□□□ -1.16
TMEM39A-201ENST00000319172 IGFL2Q6UWQ7 119 aa7.8□□□□□ -1.16
TMEM39A-201ENST00000319172 ZNF497Q6ZNH5 498 aa7.8□□□□□ -1.16
TMEM39A-201ENST00000319172 CORO2AQ92828 525 aa7.8□□□□□ -1.16
TMEM39A-201ENST00000319172 SAT2Q96F10 170 aaPredicted RBP7.8□□□□□ -1.16
TMEM39A-201ENST00000319172 TMEM147Q9BVK8 224 aa7.8□□□□□ -1.16
TMEM39A-201ENST00000319172 CACFD1Q9UGQ2 172 aa7.8□□□□□ -1.16
TMEM39A-201ENST00000319172 AMMECR1Q9Y4X0 333 aaPredicted RBP7.8□□□□□ -1.16
TMEM39A-201ENST00000319172 KPTNQ9Y664 436 aa7.8□□□□□ -1.16
TMEM39A-201ENST00000319172 NAV3Q8IVL0 2385 aa7.8□□□□□ -1.16
TMEM39A-201ENST00000319172 C17orf98A8MV24 154 aa7.8□□□□□ -1.16
TMEM39A-201ENST00000319172 SRRM5B3KS81 715 aa7.8□□□□□ -1.16
TMEM39A-201ENST00000319172 NDUFA2O43678 99 aa7.8□□□□□ -1.16
TMEM39A-201ENST00000319172 EIF3GO75821 320 aaKnown RBP eCLIP7.8□□□□□ -1.16
TMEM39A-201ENST00000319172 NMBP08949 121 aa7.8□□□□□ -1.16
TMEM39A-201ENST00000319172 MMDQ15546 238 aa7.8□□□□□ -1.16
TMEM39A-201ENST00000319172 MBNL2Q5VZF2 373 aaKnown RBP7.8□□□□□ -1.16
TMEM39A-201ENST00000319172 ABHD12Q8N2K0 398 aa7.8□□□□□ -1.16
TMEM39A-201ENST00000319172 VSTM2AQ8TAG5 236 aa7.8□□□□□ -1.16
TMEM39A-201ENST00000319172 TRAF4Q9BUZ4 470 aaPredicted RBP7.8□□□□□ -1.16
TMEM39A-201ENST00000319172 TMUB1Q9BVT8 246 aa7.8□□□□□ -1.16
TMEM39A-201ENST00000319172 DOK5Q9P104 306 aa7.8□□□□□ -1.16
TMEM39A-201ENST00000319172 RPS10-NUDT3A0A1W2PQS6 291 aa7.79□□□□□ -1.16
TMEM39A-201ENST00000319172 ZNF729A6NN14 1252 aaPredicted RBP7.79□□□□□ -1.16
TMEM39A-201ENST00000319172 LEUTXA8MZ59 168 aa7.79□□□□□ -1.16
TMEM39A-201ENST00000319172 DVL1O14640 695 aa7.79□□□□□ -1.16
TMEM39A-201ENST00000319172 CD8AP01732 235 aa7.79□□□□□ -1.16
TMEM39A-201ENST00000319172 MBP02144 154 aa7.79□□□□□ -1.16
TMEM39A-201ENST00000319172 OR10J4P0C629 311 aa7.79□□□□□ -1.16
TMEM39A-201ENST00000319172 RPS10P46783 165 aaKnown RBP7.79□□□□□ -1.16
TMEM39A-201ENST00000319172 RAB5BP61020 215 aa7.79□□□□□ -1.16
TMEM39A-201ENST00000319172 BTNL8Q6UX41 500 aa7.79□□□□□ -1.16
TMEM39A-201ENST00000319172 FAM90A1Q86YD7 464 aa7.79□□□□□ -1.16
TMEM39A-201ENST00000319172 OR10A7Q8NGE5 316 aa7.79□□□□□ -1.16
TMEM39A-201ENST00000319172 DPF1Q92782 380 aa7.79□□□□□ -1.16
TMEM39A-201ENST00000319172 CYYR1Q96J86 154 aa7.79□□□□□ -1.16
TMEM39A-201ENST00000319172 LPAR3Q9UBY5 353 aa7.79□□□□□ -1.16
TMEM39A-201ENST00000319172 TRAV14DV4A0A0A6YYC5 116 aa7.79□□□□□ -1.16
TMEM39A-201ENST00000319172 IGHV3-21A0A0B4J1V1 117 aa7.79□□□□□ -1.16
TMEM39A-201ENST00000319172 MAP1LC3B2A6NCE7 125 aa7.79□□□□□ -1.16
TMEM39A-201ENST00000319172 ZNF727A8MUV8 499 aa7.79□□□□□ -1.16
TMEM39A-201ENST00000319172 ERVH48-1M5A8F1 160 aa7.79□□□□□ -1.16
TMEM39A-201ENST00000319172 GNLYP22749 145 aa7.79□□□□□ -1.16
TMEM39A-201ENST00000319172 ARL16Q0P5N6 197 aa7.79□□□□□ -1.16
TMEM39A-201ENST00000319172 LHFPL1Q86WI0 220 aa7.79□□□□□ -1.16
TMEM39A-201ENST00000319172 SLC24A4Q8NFF2 622 aa7.79□□□□□ -1.16
TMEM39A-201ENST00000319172 OR13D1Q8NGV5 346 aa7.79□□□□□ -1.16
TMEM39A-201ENST00000319172 RSG1Q9BU20 258 aa7.79□□□□□ -1.16
TMEM39A-201ENST00000319172 NKX6-2Q9C056 277 aaPredicted RBP7.79□□□□□ -1.16
TMEM39A-201ENST00000319172 MAP1LC3BQ9GZQ8 125 aa7.79□□□□□ -1.16
TMEM39A-201ENST00000319172 SAV1Q9H4B6 383 aaPredicted RBP7.79□□□□□ -1.16
TMEM39A-201ENST00000319172 FKBP11Q9NYL4 201 aa7.79□□□□□ -1.16
TMEM39A-201ENST00000319172 ATG2AQ2TAZ0 1938 aa7.79□□□□□ -1.16
TMEM39A-201ENST00000319172 C1orf196B1AJZ1 125 aa7.79□□□□□ -1.16
TMEM39A-201ENST00000319172 MGST1P10620 155 aaKnown RBP7.79□□□□□ -1.16
TMEM39A-201ENST00000319172 HNF1AP20823 631 aa7.79□□□□□ -1.16
TMEM39A-201ENST00000319172 UCP1P25874 307 aa7.79□□□□□ -1.16
TMEM39A-201ENST00000319172 NPY1RP25929 384 aa7.79□□□□□ -1.16
TMEM39A-201ENST00000319172 ZNF146Q15072 292 aa7.79□□□□□ -1.16
TMEM39A-201ENST00000319172 IGF2-ASQ6U949 168 aa7.79□□□□□ -1.16
TMEM39A-201ENST00000319172 MS4A7Q9GZW8 240 aaPredicted RBP7.79□□□□□ -1.16
TMEM39A-201ENST00000319172 MMP26Q9NRE1 261 aa7.79□□□□□ -1.16
TMEM39A-201ENST00000319172 TMEM140Q9NV12 185 aa7.79□□□□□ -1.16
TMEM39A-201ENST00000319172 NAPSAO96009 420 aa7.78□□□□□ -1.16
TMEM39A-201ENST00000319172 F12P00748 615 aaPredicted RBP7.78□□□□□ -1.16
TMEM39A-201ENST00000319172 RBP4P02753 201 aa7.78□□□□□ -1.16
TMEM39A-201ENST00000319172 SUPT4H1P63272 117 aaKnown RBP7.78□□□□□ -1.16
TMEM39A-201ENST00000319172 C20orf204Q6ZNR8 217 aa7.78□□□□□ -1.16
TMEM39A-201ENST00000319172 MALSU1Q96EH3 234 aa7.78□□□□□ -1.16
TMEM39A-201ENST00000319172 RBKSQ9H477 322 aa7.78□□□□□ -1.16
TMEM39A-201ENST00000319172 PRNDQ9UKY0 176 aa7.78□□□□□ -1.16
TMEM39A-201ENST00000319172 DOPEY1Q5JWR5 2465 aa7.78□□□□□ -1.16
TMEM39A-201ENST00000319172 LY6HO94772 140 aa7.78□□□□□ -1.16
TMEM39A-201ENST00000319172 ARG1P05089 322 aa7.78□□□□□ -1.16
TMEM39A-201ENST00000319172 SFTA3P0C7M3 94 aa7.78□□□□□ -1.16
TMEM39A-201ENST00000319172 CD177Q8N6Q3 437 aa7.78□□□□□ -1.16
TMEM39A-201ENST00000319172 OR10G4Q8NGN3 311 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms