RNA–Protein interactions for RNA: ENST00000318842.11

RPGR-201, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPGR, Length 3,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-201ENST00000318842 MMDQ15546 238 aa8.07□□□□□ -1.12
RPGR-201ENST00000318842 TRIM61Q5EBN2 209 aa8.07□□□□□ -1.12
RPGR-201ENST00000318842 ARSJQ5FYB0 599 aaPredicted RBP8.07□□□□□ -1.12
RPGR-201ENST00000318842 MBD3L1Q8WWY6 194 aa8.07□□□□□ -1.12
RPGR-201ENST00000318842 TMEM18Q96B42 140 aa8.07□□□□□ -1.12
RPGR-201ENST00000318842 IMMP1LQ96LU5 166 aa8.07□□□□□ -1.12
RPGR-201ENST00000318842 AGMATQ9BSE5 352 aa8.07□□□□□ -1.12
RPGR-201ENST00000318842 REPIN1Q9BWE0 567 aaKnown RBP8.07□□□□□ -1.12
RPGR-201ENST00000318842 NPCDR1Q9BY65 106 aa8.07□□□□□ -1.12
RPGR-201ENST00000318842 CUBNO60494 3623 aa8.07□□□□□ -1.12
RPGR-201ENST00000318842 DCHS2Q6V1P9 2916 aa8.07□□□□□ -1.12
RPGR-201ENST00000318842 PMCHP20382 165 aa8.07□□□□□ -1.12
RPGR-201ENST00000318842 PSG7Q13046 419 aa8.07□□□□□ -1.12
RPGR-201ENST00000318842 CEACAM21Q3KPI0 293 aa8.07□□□□□ -1.12
RPGR-201ENST00000318842 LCN12Q6JVE5 192 aa8.07□□□□□ -1.12
RPGR-201ENST00000318842 CLEC2AQ6UVW9 174 aa8.07□□□□□ -1.12
RPGR-201ENST00000318842 ABHD12Q8N2K0 398 aa8.07□□□□□ -1.12
RPGR-201ENST00000318842 SGK494Q96LW2 274 aa8.07□□□□□ -1.12
RPGR-201ENST00000318842 RAB40CQ96S21 281 aa8.07□□□□□ -1.12
RPGR-201ENST00000318842 HINT2Q9BX68 163 aa8.07□□□□□ -1.12
RPGR-201ENST00000318842 QTRT1Q9BXR0 403 aaKnown RBP8.07□□□□□ -1.12
RPGR-201ENST00000318842 ACTR3CQ9C0K3 210 aaPredicted RBP8.07□□□□□ -1.12
RPGR-201ENST00000318842 ZDHHC11Q9H8X9 412 aa8.07□□□□□ -1.12
RPGR-201ENST00000318842 PLSCR2Q9NRY7 297 aa8.07□□□□□ -1.12
RPGR-201ENST00000318842 CHTOPQ9Y3Y2 248 aaKnown RBP8.07□□□□□ -1.12
RPGR-201ENST00000318842 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.06□□□□□ -1.12
RPGR-201ENST00000318842 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.06□□□□□ -1.12
RPGR-201ENST00000318842 CBR3O75828 277 aa8.06□□□□□ -1.12
RPGR-201ENST00000318842 ARL14EPLP0DKL9 152 aa8.06□□□□□ -1.12
RPGR-201ENST00000318842 PAX1P15863 534 aa8.06□□□□□ -1.12
RPGR-201ENST00000318842 HBG1P69891 147 aa8.06□□□□□ -1.12
RPGR-201ENST00000318842 HBG2P69892 147 aa8.06□□□□□ -1.12
RPGR-201ENST00000318842 FOXO1Q12778 655 aa8.06□□□□□ -1.12
RPGR-201ENST00000318842 PNRC1Q12796 327 aaPredicted RBP8.06□□□□□ -1.12
RPGR-201ENST00000318842 RCHY1Q96PM5 261 aa8.06□□□□□ -1.12
RPGR-201ENST00000318842 C1QTNF5Q9BXJ0 243 aa8.06□□□□□ -1.12
RPGR-201ENST00000318842 TUBG2Q9NRH3 451 aa8.06□□□□□ -1.12
RPGR-201ENST00000318842 HCFC1P51610 2035 aa8.06□□□□□ -1.12
RPGR-201ENST00000318842 DYSFO75923 2080 aa8.06□□□□□ -1.12
RPGR-201ENST00000318842 LOC102724200A0A096LPH7 203 aaPredicted RBP8.06□□□□□ -1.12
RPGR-201ENST00000318842 KIR2DS1A0A191URI9 304 aa8.06□□□□□ -1.12
RPGR-201ENST00000318842 B4DEV8 164 aa8.06□□□□□ -1.12
RPGR-201ENST00000318842 M0R143 59 aa8.06□□□□□ -1.12
RPGR-201ENST00000318842 KIR2DS4P43632 304 aa8.06□□□□□ -1.12
RPGR-201ENST00000318842 LHX2P50458 406 aa8.06□□□□□ -1.12
RPGR-201ENST00000318842 KIR2DS1Q14954 304 aa8.06□□□□□ -1.12
RPGR-201ENST00000318842 KRTCAP3Q53RY4 240 aa8.06□□□□□ -1.12
RPGR-201ENST00000318842 ZNF709Q8N972 641 aa8.06□□□□□ -1.12
RPGR-201ENST00000318842 ST6GALNAC6Q969X2 333 aa8.06□□□□□ -1.12
RPGR-201ENST00000318842 OR2J1Q9GZK6 312 aa8.06□□□□□ -1.12
RPGR-201ENST00000318842 SMDT1Q9H4I9 107 aa8.06□□□□□ -1.12
RPGR-201ENST00000318842 ZNRD1Q9P1U0 126 aa8.06□□□□□ -1.12
RPGR-201ENST00000318842 NAV3Q8IVL0 2385 aa8.06□□□□□ -1.12
RPGR-201ENST00000318842 NXPH2O95156 264 aa8.05□□□□□ -1.12
RPGR-201ENST00000318842 VAMP5O95183 116 aa8.05□□□□□ -1.12
RPGR-201ENST00000318842 CRYABP02511 175 aaKnown RBP8.05□□□□□ -1.12
RPGR-201ENST00000318842 LYSMD4Q5XG99 296 aa8.05□□□□□ -1.12
RPGR-201ENST00000318842 DOLPP1Q86YN1 238 aa8.05□□□□□ -1.12
RPGR-201ENST00000318842 OCC1Q8TAD7 63 aa8.05□□□□□ -1.12
RPGR-201ENST00000318842 BTF3L4Q96K17 158 aa8.05□□□□□ -1.12
RPGR-201ENST00000318842 MCRIP2Q9BUT9 160 aaKnown RBP8.05□□□□□ -1.12
RPGR-201ENST00000318842 CHRNA10Q9GZZ6 450 aa8.05□□□□□ -1.12
RPGR-201ENST00000318842 C19orf25Q9UFG5 118 aaPredicted RBP8.05□□□□□ -1.12
RPGR-201ENST00000318842 PSG11Q9UQ72 335 aa8.05□□□□□ -1.12
RPGR-201ENST00000318842 PLCE1Q9P212 2302 aa8.05□□□□□ -1.12
RPGR-201ENST00000318842 TET2Q6N021 2002 aaPredicted RBP8.05□□□□□ -1.12
RPGR-201ENST00000318842 TRAV1-1A0A0B4J248 108 aa8.05□□□□□ -1.12
RPGR-201ENST00000318842 K7EN84 100 aa8.05□□□□□ -1.12
RPGR-201ENST00000318842 S100A7P31151 101 aa8.05□□□□□ -1.12
RPGR-201ENST00000318842 ATP1A1-AS1Q5TC04 95 aa8.05□□□□□ -1.12
RPGR-201ENST00000318842 PRAMEF6Q5VXH4 476 aa8.05□□□□□ -1.12
RPGR-201ENST00000318842 Q6ZSR3 168 aa8.05□□□□□ -1.12
RPGR-201ENST00000318842 AGBL5Q8NDL9 886 aa8.05□□□□□ -1.12
RPGR-201ENST00000318842 RNASE7Q9H1E1 156 aaKnown RBP8.05□□□□□ -1.12
RPGR-201ENST00000318842 YTHDF2Q9Y5A9 579 aaKnown RBP8.05□□□□□ -1.12
RPGR-201ENST00000318842 PCSK5Q92824 1860 aa8.05□□□□□ -1.12
RPGR-201ENST00000318842 TGOLN2O43493 480 aa8.05□□□□□ -1.12
RPGR-201ENST00000318842 AGFG2O95081 481 aa8.05□□□□□ -1.12
RPGR-201ENST00000318842 GABRA2P47869 451 aa8.05□□□□□ -1.12
RPGR-201ENST00000318842 RPL15P61313 204 aaKnown RBP8.05□□□□□ -1.12
RPGR-201ENST00000318842 PPP1CBP62140 327 aa8.05□□□□□ -1.12
RPGR-201ENST00000318842 IQCJQ1A5X6 159 aa8.05□□□□□ -1.12
RPGR-201ENST00000318842 MAFAQ8NHW3 353 aaPredicted RBP8.05□□□□□ -1.12
RPGR-201ENST00000318842 CMTM2Q8TAZ6 248 aa8.05□□□□□ -1.12
RPGR-201ENST00000318842 NEIL1Q96FI4 390 aaPredicted RBP8.05□□□□□ -1.12
RPGR-201ENST00000318842 IL36GQ9NZH8 169 aa8.05□□□□□ -1.12
RPGR-201ENST00000318842 OR9G9P0C7N8 305 aa8.04□□□□□ -1.12
RPGR-201ENST00000318842 TIMP3P35625 211 aa8.04□□□□□ -1.12
RPGR-201ENST00000318842 CDC34P49427 236 aaPredicted RBP8.04□□□□□ -1.12
RPGR-201ENST00000318842 ERVFC1-1P60608 527 aa8.04□□□□□ -1.12
RPGR-201ENST00000318842 MLANAQ16655 118 aa8.04□□□□□ -1.12
RPGR-201ENST00000318842 MRPL54Q6P161 138 aaKnown RBP8.04□□□□□ -1.12
RPGR-201ENST00000318842 SCCPDHQ8NBX0 429 aa8.04□□□□□ -1.12
RPGR-201ENST00000318842 OR8G5Q8NG78 346 aa8.04□□□□□ -1.12
RPGR-201ENST00000318842 PINX1Q96BK5 328 aaKnown RBP8.04□□□□□ -1.12
RPGR-201ENST00000318842 C10orf35Q96D05 121 aa8.04□□□□□ -1.12
RPGR-201ENST00000318842 UHRF2Q96PU4 802 aa8.04□□□□□ -1.12
RPGR-201ENST00000318842 SAMD10Q9BYL1 202 aa8.04□□□□□ -1.12
RPGR-201ENST00000318842 SEPSECSQ9HD40 501 aaKnown RBP8.04□□□□□ -1.12
RPGR-201ENST00000318842 FBXL7Q9UJT9 491 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms