RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 LPAR6P43657 344 aa12.39□□□□□ -0.43
PDLIM5-202ENST00000318007 RND3P61587 244 aa12.39□□□□□ -0.43
PDLIM5-202ENST00000318007 ZNF585BQ52M93 769 aa12.39□□□□□ -0.43
PDLIM5-202ENST00000318007 TMEM268Q5VZI3 342 aa12.39□□□□□ -0.43
PDLIM5-202ENST00000318007 TMEM219Q86XT9 240 aa12.39□□□□□ -0.43
PDLIM5-202ENST00000318007 MINDY2Q8NBR6 621 aa12.39□□□□□ -0.43
PDLIM5-202ENST00000318007 DDB2Q92466 427 aa12.39□□□□□ -0.43
PDLIM5-202ENST00000318007 H0Y980 276 aa12.38□□□□□ -0.43
PDLIM5-202ENST00000318007 CREBL2O60519 120 aaPredicted RBP12.38□□□□□ -0.43
PDLIM5-202ENST00000318007 ADAP1O75689 374 aa12.38□□□□□ -0.43
PDLIM5-202ENST00000318007 HOXB5P09067 269 aa12.38□□□□□ -0.43
PDLIM5-202ENST00000318007 FBP1P09467 338 aa12.38□□□□□ -0.43
PDLIM5-202ENST00000318007 ANXA3P12429 323 aa12.38□□□□□ -0.43
PDLIM5-202ENST00000318007 DHODHQ02127 395 aa12.38□□□□□ -0.43
PDLIM5-202ENST00000318007 TMEM187Q14656 261 aa12.38□□□□□ -0.43
PDLIM5-202ENST00000318007 SSX3Q99909 188 aa12.38□□□□□ -0.43
PDLIM5-202ENST00000318007 TMEM222Q9H0R3 208 aa12.38□□□□□ -0.43
PDLIM5-202ENST00000318007 NSD1Q96L73 2696 aaPredicted RBP12.38□□□□□ -0.43
PDLIM5-202ENST00000318007 NIPBLQ6KC79 2804 aaeCLIP12.38□□□□□ -0.43
PDLIM5-202ENST00000318007 NAV3Q8IVL0 2385 aa12.38□□□□□ -0.43
PDLIM5-202ENST00000318007 FAM25EA8MYX2 175 aa12.38□□□□□ -0.43
PDLIM5-202ENST00000318007 NXPH3O95157 252 aa12.38□□□□□ -0.43
PDLIM5-202ENST00000318007 FSHBP01225 129 aa12.38□□□□□ -0.43
PDLIM5-202ENST00000318007 IGKV1-39P01597 117 aa12.38□□□□□ -0.43
PDLIM5-202ENST00000318007 IGKV1D-39P04432 117 aa12.38□□□□□ -0.43
PDLIM5-202ENST00000318007 RTL8BQ17RB0 113 aa12.38□□□□□ -0.43
PDLIM5-202ENST00000318007 LYZL2Q7Z4W2 148 aa12.38□□□□□ -0.43
PDLIM5-202ENST00000318007 ZNF695Q8IW36 515 aa12.38□□□□□ -0.43
PDLIM5-202ENST00000318007 SLC35G3Q8N808 338 aa12.38□□□□□ -0.43
PDLIM5-202ENST00000318007 RNASE11Q8TAA1 199 aaKnown RBP12.38□□□□□ -0.43
PDLIM5-202ENST00000318007 ZNF431Q8TF32 576 aaPredicted RBP12.38□□□□□ -0.43
PDLIM5-202ENST00000318007 CFHR4Q92496 578 aa12.38□□□□□ -0.43
PDLIM5-202ENST00000318007 HARBI1Q96MB7 349 aa12.38□□□□□ -0.43
PDLIM5-202ENST00000318007 ZNF48Q96MX3 618 aaPredicted RBP12.38□□□□□ -0.43
PDLIM5-202ENST00000318007 GPN1Q9HCN4 374 aaPredicted RBP12.38□□□□□ -0.43
PDLIM5-202ENST00000318007 GAB2Q9UQC2 676 aa12.38□□□□□ -0.43
PDLIM5-202ENST00000318007 MPTX1A8MV57 137 aa12.37□□□□□ -0.43
PDLIM5-202ENST00000318007 H3BUX3 64 aa12.37□□□□□ -0.43
PDLIM5-202ENST00000318007 SHOXO15266 292 aa12.37□□□□□ -0.43
PDLIM5-202ENST00000318007 MECP2P51608 486 aaKnown RBP12.37□□□□□ -0.43
PDLIM5-202ENST00000318007 AKR1C2P52895 323 aa12.37□□□□□ -0.43
PDLIM5-202ENST00000318007 RPS16P62249 146 aaKnown RBP12.37□□□□□ -0.43
PDLIM5-202ENST00000318007 CCDC144NLQ6NUI1 221 aa12.37□□□□□ -0.43
PDLIM5-202ENST00000318007 OR5AN1Q8NGI8 311 aa12.37□□□□□ -0.43
PDLIM5-202ENST00000318007 FAM216AQ8WUB2 273 aa12.37□□□□□ -0.43
PDLIM5-202ENST00000318007 WASHC3Q9Y3C0 194 aa12.37□□□□□ -0.43
PDLIM5-202ENST00000318007 SRRM4A7MD48 611 aaKnown RBP12.36□□□□□ -0.43
PDLIM5-202ENST00000318007 TXNL1O43396 289 aa12.36□□□□□ -0.43
PDLIM5-202ENST00000318007 VENTXO95231 258 aa12.36□□□□□ -0.43
PDLIM5-202ENST00000318007 DUS4LO95620 317 aaKnown RBP12.36□□□□□ -0.43
PDLIM5-202ENST00000318007 HNF1AP20823 631 aa12.36□□□□□ -0.43
PDLIM5-202ENST00000318007 C2orf68Q2NKX9 166 aa12.36□□□□□ -0.43
PDLIM5-202ENST00000318007 FAM71F2Q6NXP2 309 aa12.36□□□□□ -0.43
PDLIM5-202ENST00000318007 C11orf88Q6PI97 169 aa12.36□□□□□ -0.43
PDLIM5-202ENST00000318007 Q6ZNX1 250 aa12.36□□□□□ -0.43
PDLIM5-202ENST00000318007 DMBX1Q8NFW5 382 aa12.36□□□□□ -0.43
PDLIM5-202ENST00000318007 OR4S2Q8NH73 311 aa12.36□□□□□ -0.43
PDLIM5-202ENST00000318007 ZDHHC16Q969W1 377 aa12.36□□□□□ -0.43
PDLIM5-202ENST00000318007 FLYWCH2Q96CP2 140 aaKnown RBP12.36□□□□□ -0.43
PDLIM5-202ENST00000318007 GALNT14Q96FL9 552 aa12.36□□□□□ -0.43
PDLIM5-202ENST00000318007 PHB2Q99623 299 aa12.36□□□□□ -0.43
PDLIM5-202ENST00000318007 ALX4Q9H161 411 aaPredicted RBP12.36□□□□□ -0.43
PDLIM5-202ENST00000318007 OR51J1Q9H342 316 aa12.36□□□□□ -0.43
PDLIM5-202ENST00000318007 SIX6O95475 246 aa12.36□□□□□ -0.43
PDLIM5-202ENST00000318007 IGHV4-59P01825 116 aa12.36□□□□□ -0.43
PDLIM5-202ENST00000318007 LIAT1Q6ZQX7 453 aa12.36□□□□□ -0.43
PDLIM5-202ENST00000318007 OR8H3Q8N146 312 aa12.36□□□□□ -0.43
PDLIM5-202ENST00000318007 C12orf45Q8N5I9 185 aaPredicted RBP12.36□□□□□ -0.43
PDLIM5-202ENST00000318007 ADTRPQ96IZ2 230 aa12.36□□□□□ -0.43
PDLIM5-202ENST00000318007 NSG2Q9Y328 171 aa12.36□□□□□ -0.43
PDLIM5-202ENST00000318007 NF1P21359 2839 aa12.35□□□□□ -0.43
PDLIM5-202ENST00000318007 A0A0G2JRQ6 117 aa12.35□□□□□ -0.43
PDLIM5-202ENST00000318007 MARCH11A6NNE9 402 aa12.35□□□□□ -0.43
PDLIM5-202ENST00000318007 NCBP2LA6PVI3 153 aaKnown RBP12.35□□□□□ -0.43
PDLIM5-202ENST00000318007 GOSR2O14653 212 aa12.35□□□□□ -0.43
PDLIM5-202ENST00000318007 PRAF2O60831 178 aa12.35□□□□□ -0.43
PDLIM5-202ENST00000318007 UCP1P25874 307 aa12.35□□□□□ -0.43
PDLIM5-202ENST00000318007 ARHGDIBP52566 201 aa12.35□□□□□ -0.43
PDLIM5-202ENST00000318007 F2RL1P55085 397 aa12.35□□□□□ -0.43
PDLIM5-202ENST00000318007 RAG2P55895 527 aa12.35□□□□□ -0.43
PDLIM5-202ENST00000318007 MMDQ15546 238 aa12.35□□□□□ -0.43
PDLIM5-202ENST00000318007 MSMO1Q15800 293 aa12.35□□□□□ -0.43
PDLIM5-202ENST00000318007 COQ8AQ8NI60 647 aa12.35□□□□□ -0.43
PDLIM5-202ENST00000318007 MITD1Q8WV92 249 aa12.35□□□□□ -0.43
PDLIM5-202ENST00000318007 R3HDM4Q96D70 268 aa12.35□□□□□ -0.43
PDLIM5-202ENST00000318007 CLCC1Q96S66 551 aa12.35□□□□□ -0.43
PDLIM5-202ENST00000318007 TPSG1Q9NRR2 321 aa12.35□□□□□ -0.43
PDLIM5-202ENST00000318007 C13orf42A0A1B0GVH6 325 aa12.34□□□□□ -0.43
PDLIM5-202ENST00000318007 SH2D7A6NKC9 451 aaPredicted RBP12.34□□□□□ -0.43
PDLIM5-202ENST00000318007 IL5P05113 134 aa12.34□□□□□ -0.43
PDLIM5-202ENST00000318007 TMEM11P17152 192 aa12.34□□□□□ -0.43
PDLIM5-202ENST00000318007 SRD5A1P18405 259 aa12.34□□□□□ -0.43
PDLIM5-202ENST00000318007 SELENOHQ8IZQ5 122 aaKnown RBP12.34□□□□□ -0.43
PDLIM5-202ENST00000318007 SIGLECL1Q8N7X8 197 aa12.34□□□□□ -0.43
PDLIM5-202ENST00000318007 OR4C13Q8NGP0 309 aa12.34□□□□□ -0.43
PDLIM5-202ENST00000318007 RBPMSQ93062 196 aaKnown RBP12.34□□□□□ -0.43
PDLIM5-202ENST00000318007 EAF1Q96JC9 268 aaPredicted RBP12.34□□□□□ -0.43
PDLIM5-202ENST00000318007 C7orf66A4D0T2 115 aa12.34□□□□□ -0.43
PDLIM5-202ENST00000318007 HOXA3O43365 443 aaPredicted RBP12.34□□□□□ -0.43
PDLIM5-202ENST00000318007 SLC25A17O43808 307 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms