RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 NOTCH2Q04721 2471 aa6.42□□□□□ -1.38
CDHR3-201ENST00000317716 CHEK1O14757 476 aa6.42□□□□□ -1.38
CDHR3-201ENST00000317716 TMEM50AO95807 157 aa6.42□□□□□ -1.38
CDHR3-201ENST00000317716 IGKV3-11P04433 115 aa6.42□□□□□ -1.38
CDHR3-201ENST00000317716 APELAP0DMC3 54 aa6.42□□□□□ -1.38
CDHR3-201ENST00000317716 MPZP25189 248 aa6.42□□□□□ -1.38
CDHR3-201ENST00000317716 BRS3P32247 399 aa6.42□□□□□ -1.38
CDHR3-201ENST00000317716 FOXA3P55318 350 aaPredicted RBP6.42□□□□□ -1.38
CDHR3-201ENST00000317716 RELBQ01201 579 aa6.42□□□□□ -1.38
CDHR3-201ENST00000317716 LCN12Q6JVE5 192 aa6.42□□□□□ -1.38
CDHR3-201ENST00000317716 APOBEC3DQ96AK3 386 aaPredicted RBP6.42□□□□□ -1.38
CDHR3-201ENST00000317716 NAA38Q9BRA0 125 aaKnown RBP6.42□□□□□ -1.38
CDHR3-201ENST00000317716 MGAQ8IWI9 3026 aa6.42□□□□□ -1.38
CDHR3-201ENST00000317716 IGKV1-12A0A0C4DH73 117 aa6.42□□□□□ -1.38
CDHR3-201ENST00000317716 SERTM2A0A1B0GWG4 89 aa6.42□□□□□ -1.38
CDHR3-201ENST00000317716 SCO2A0A1W2PP80 73 aa6.42□□□□□ -1.38
CDHR3-201ENST00000317716 SH2D1BO14796 132 aa6.42□□□□□ -1.38
CDHR3-201ENST00000317716 IGKV1D-12P01611 117 aa6.42□□□□□ -1.38
CDHR3-201ENST00000317716 TFF1P04155 84 aa6.42□□□□□ -1.38
CDHR3-201ENST00000317716 ARL14EPLP0DKL9 152 aa6.42□□□□□ -1.38
CDHR3-201ENST00000317716 TDGF1P3P51864 188 aa6.42□□□□□ -1.38
CDHR3-201ENST00000317716 SUMO3P55854 103 aaPredicted RBP6.42□□□□□ -1.38
CDHR3-201ENST00000317716 SERF2P84101 59 aa6.42□□□□□ -1.38
CDHR3-201ENST00000317716 AESQ08117 197 aa6.42□□□□□ -1.38
CDHR3-201ENST00000317716 FAM90A2PQ658T7 463 aa6.42□□□□□ -1.38
CDHR3-201ENST00000317716 OR2M3Q8NG83 312 aa6.42□□□□□ -1.38
CDHR3-201ENST00000317716 OR52L2PQ8NGH6 319 aa6.42□□□□□ -1.38
CDHR3-201ENST00000317716 OR2Y1Q8NGV0 311 aa6.42□□□□□ -1.38
CDHR3-201ENST00000317716 ANGPTL4Q9BY76 406 aa6.42□□□□□ -1.38
CDHR3-201ENST00000317716 EGLN1Q9GZT9 426 aa6.42□□□□□ -1.38
CDHR3-201ENST00000317716 B4GALT7Q9UBV7 327 aa6.42□□□□□ -1.38
CDHR3-201ENST00000317716 CREBBPQ92793 2442 aa6.42□□□□□ -1.38
CDHR3-201ENST00000317716 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.42□□□□□ -1.38
CDHR3-201ENST00000317716 A0A0G2JRQ6 117 aa6.42□□□□□ -1.38
CDHR3-201ENST00000317716 A0A1W2PRD5 423 aa6.42□□□□□ -1.38
CDHR3-201ENST00000317716 A0A1W2PRF3 423 aa6.42□□□□□ -1.38
CDHR3-201ENST00000317716 A0A1W2PRM7 423 aa6.42□□□□□ -1.38
CDHR3-201ENST00000317716 A6NCN8 305 aa6.42□□□□□ -1.38
CDHR3-201ENST00000317716 CD99P14209 185 aa6.42□□□□□ -1.38
CDHR3-201ENST00000317716 COMPP49747 757 aaPredicted RBP6.42□□□□□ -1.38
CDHR3-201ENST00000317716 TRIP6Q15654 476 aaKnown RBP6.42□□□□□ -1.38
CDHR3-201ENST00000317716 LDLRAD2Q5SZI1 272 aa6.42□□□□□ -1.38
CDHR3-201ENST00000317716 PQLC2Q6ZP29 291 aa6.42□□□□□ -1.38
CDHR3-201ENST00000317716 DNM1P46Q6ZS02 220 aa6.42□□□□□ -1.38
CDHR3-201ENST00000317716 ASCL5Q7RTU5 278 aa6.42□□□□□ -1.38
CDHR3-201ENST00000317716 SLC35E1Q96K37 410 aa6.42□□□□□ -1.38
CDHR3-201ENST00000317716 C18orf12Q96KH6 178 aa6.42□□□□□ -1.38
CDHR3-201ENST00000317716 STRADBQ9C0K7 418 aa6.42□□□□□ -1.38
CDHR3-201ENST00000317716 DEFB127Q9H1M4 99 aa6.42□□□□□ -1.38
CDHR3-201ENST00000317716 UQCR10Q9UDW1 63 aa6.42□□□□□ -1.38
CDHR3-201ENST00000317716 ZNF835Q9Y2P0 537 aa6.42□□□□□ -1.38
CDHR3-201ENST00000317716 POLR3KQ9Y2Y1 108 aaPredicted RBP6.42□□□□□ -1.38
CDHR3-201ENST00000317716 USF3Q68DE3 2245 aa6.41□□□□□ -1.38
CDHR3-201ENST00000317716 A0A1W2PR77 199 aa6.41□□□□□ -1.38
CDHR3-201ENST00000317716 B4E171 279 aa6.41□□□□□ -1.38
CDHR3-201ENST00000317716 ENSAO43768 121 aaKnown RBP6.41□□□□□ -1.38
CDHR3-201ENST00000317716 SFTPCP11686 197 aa6.41□□□□□ -1.38
CDHR3-201ENST00000317716 GZMHP20718 246 aa6.41□□□□□ -1.38
CDHR3-201ENST00000317716 CSRP1P21291 193 aaKnown RBP6.41□□□□□ -1.38
CDHR3-201ENST00000317716 GNG3P63215 75 aa6.41□□□□□ -1.38
CDHR3-201ENST00000317716 FNDC7Q5VTL7 733 aa6.41□□□□□ -1.38
CDHR3-201ENST00000317716 PRSS33Q8NF86 280 aa6.41□□□□□ -1.38
CDHR3-201ENST00000317716 TMEM170AQ8WVE7 144 aa6.41□□□□□ -1.38
CDHR3-201ENST00000317716 RNF2Q99496 336 aa6.41□□□□□ -1.38
CDHR3-201ENST00000317716 ALKBH7Q9BT30 221 aaPredicted RBP6.41□□□□□ -1.38
CDHR3-201ENST00000317716 LPAR2Q9HBW0 351 aa6.41□□□□□ -1.38
CDHR3-201ENST00000317716 TMEM106BQ9NUM4 274 aa6.41□□□□□ -1.38
CDHR3-201ENST00000317716 PTPRQQ9UMZ3 2332 aa6.41□□□□□ -1.38
CDHR3-201ENST00000317716 A0A0U1RQV5 110 aa6.41□□□□□ -1.38
CDHR3-201ENST00000317716 H3BTX0 84 aa6.41□□□□□ -1.38
CDHR3-201ENST00000317716 CDKN1AP38936 164 aa6.41□□□□□ -1.38
CDHR3-201ENST00000317716 GPR6P46095 362 aaPredicted RBP6.41□□□□□ -1.38
CDHR3-201ENST00000317716 RIPPLY3P57055 190 aa6.41□□□□□ -1.38
CDHR3-201ENST00000317716 ASPHD1Q5U4P2 390 aa6.41□□□□□ -1.38
CDHR3-201ENST00000317716 ABLIM2Q6H8Q1 611 aa6.41□□□□□ -1.38
CDHR3-201ENST00000317716 ZNF525Q8N782 197 aa6.41□□□□□ -1.38
CDHR3-201ENST00000317716 OR4D5Q8NGN0 318 aa6.41□□□□□ -1.38
CDHR3-201ENST00000317716 OR2T6Q8NHC8 308 aa6.41□□□□□ -1.38
CDHR3-201ENST00000317716 SFRP2Q96HF1 295 aa6.41□□□□□ -1.38
CDHR3-201ENST00000317716 MIEN1Q9BRT3 115 aa6.41□□□□□ -1.38
CDHR3-201ENST00000317716 OR2H1Q9GZK4 316 aa6.41□□□□□ -1.38
CDHR3-201ENST00000317716 DEPPQ9NTK1 212 aa6.41□□□□□ -1.38
CDHR3-201ENST00000317716 TAAR3PQ9P1P4 343 aa6.41□□□□□ -1.38
CDHR3-201ENST00000317716 B3GAT1Q9P2W7 334 aa6.41□□□□□ -1.38
CDHR3-201ENST00000317716 FRYQ5TBA9 3013 aa6.41□□□□□ -1.38
CDHR3-201ENST00000317716 DSPP15924 2871 aaKnown RBP6.41□□□□□ -1.38
CDHR3-201ENST00000317716 LILRA5A6NI73 299 aa6.41□□□□□ -1.38
CDHR3-201ENST00000317716 H0Y980 276 aa6.41□□□□□ -1.38
CDHR3-201ENST00000317716 EFNA2O43921 213 aa6.41□□□□□ -1.38
CDHR3-201ENST00000317716 S1PR2O95136 353 aa6.41□□□□□ -1.38
CDHR3-201ENST00000317716 CA1P00915 261 aaPredicted RBP6.41□□□□□ -1.38
CDHR3-201ENST00000317716 CRYBB3P26998 211 aa6.41□□□□□ -1.38
CDHR3-201ENST00000317716 ZP4Q12836 540 aa6.41□□□□□ -1.38
CDHR3-201ENST00000317716 TDRG1Q3Y452 100 aa6.41□□□□□ -1.38
CDHR3-201ENST00000317716 ZNF826PQ6ZT77 177 aa6.41□□□□□ -1.38
CDHR3-201ENST00000317716 ABHD12Q8N2K0 398 aa6.41□□□□□ -1.38
CDHR3-201ENST00000317716 RPP25LQ8N5L8 163 aaKnown RBP6.41□□□□□ -1.38
CDHR3-201ENST00000317716 OR1L1Q8NH94 360 aa6.41□□□□□ -1.38
CDHR3-201ENST00000317716 TRIB1Q96RU8 372 aa6.41□□□□□ -1.38
CDHR3-201ENST00000317716 NUDT16L1Q9BRJ7 211 aaKnown RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 161.8 ms